Physical Sciences and Mathematics Commons^™

Investigating Sucrose And D-Trehalose In Aot Reverse Micelles, Delaney Collier, Bridget L. Gourley

Annual Student Research Poster Session

Reverse micelles are nanosized structures that encapsulate small water pools and allow us to investigate the fundamental interactions of small organic molecules in nanoconfinement. The behavior of small organic molecules, sometimes referred to as osmolytes, differs in bulk solution and confinement. Because reverse micelles are a good model for biological nanoconfinement, investigating osmolytes in reverse micelle systems can help us to better understand the role they play in biological systems. Optical spectroscopy such as UV-Vis, Fluorescence, and Red Edge Excitation (REES) was used to probe the environment of the reverse micelles. Three small organic molecules were studied: a monosaccharide, d-glucose, …

Investigating Rare Genetic Variants Of Unknown Significance In Ldha, Animesh Dali, Brennan Jensen, Olivia Lockette, Duyen Nguyen

Annual Student Research Poster Session

The exponential expansion and advancement of genetic sequencing has revealed the molecular basis of many genetic diseases. However, many genetic mutations are still classified as variants of unknown significance (VUS). Our lab focused on eleven missense variants in Lactate Dehydrogenase A (LDHA), an enzyme vital in anaerobic respiration. The intent with our research is to produce data on the kinetic functionality of wild type LDHA and compare this to its mutants of unknown significance. This data, supplemented with the structural information of the mutants can help reduce the ambiguity in the diagnosis of genetic disorders involving the LDHA enzyme. Currently, …

Gaxin2-Xo3 Surface Pyramids Interaction With Formaldehyde: Thermodynamic And Sensing Analysis, Mudar Ahmed Abdulsattar

Karbala International Journal of Modern Science

GaxIn2-xO3 surface pyramids' electronic structures are investigated using density functional theory, including dispersion corrections. Application of GaxIn2-xO3 surface pyramids as a gas sensor for formaldehyde is also performed and compared with experimental findings. These findings show that the energy gap of these pyramids follows closely with the bulk values. The energy gap increases between the two limits, In2O3 and Ga2O3. Applying GaxIn2-xO3 surface pyramids as a gas sensor uses transition state theory formalism. Thermodynamic quantities such as activation Gibbs energy, enthalpy, and entropy are needed for temperature-dependent calculations. A comparison of sensor response which is proportional to reaction rate as …

Substituent Effects And Mechanistic Insights On The Catalytic Activities Of (Tetraarylcyclopentadienone)Iron Carbonyl Compounds In Transfer Hydrogenations And Dehydrogenations, Bryn K. Werley, Xintong Hou, Evan P. Bertonazzi, Anthony Chianese, Timothy W. Funk

Chemistry Faculty Publications

(Cyclopentadienone)iron carbonyl compounds are catalytically active in carbonyl/imine reductions, alcohol oxidations, and borrowing hydrogen reactions, but the effect of cyclopentadienone electronics on their activity is not well established. A series of (tetraarylcyclopentadienone)iron tricarbonyl compounds with varied electron densities on the cyclopentadienone were prepared, and their activities in transfer hydrogenations and dehydrogenations were explored. Additionally, mechanistic studies, including kinetic isotope effect experiments and modifications to substrate electronics, were undertaken to gain insights into catalyst resting states and turnover-limiting steps of these reactions. As the cyclopentadienone electron density increased, both the transfer hydrogenation and dehydrogenation rates increased. A catalytically relevant, trimethylamine-ligated iron …

Acceptorless Dehydrogenation Of Amines Using Metal Ligand Cooperative Catalysts, Amrit Singh

Electronic Thesis and Dissertation Repository

Catalytic acceptorless dehydrogenation (AD) is an atom economic route for synthesizing imines and enamines, which are common final or intermediary functionalities in various pharmaceutically relevant molecules and materials. Imines, for example, are present in a wide range of syntheses due to their versatility. Meanwhile, indole is the 9^th most common nitrogen heterocycle in FDA approved drugs. For imine synthesis via AD, selectivity challenges remain. Reactions often afford a product mixture of imine, nitrile, and a secondary amine. Previously, we showed that the metal-ligand cooperative (MLC) catalyst [Ru(Cp)(P^Ph₂N^Bn₂)(MeCN)]PF₆ showed improved selectivity over a …

Modification Of Thermally Activated Delayed Fluorescence Emitters Comprising Acridan– Pyrimidine Moieties For Efficient Sky-Blue To Greenish-Blue Oleds, Yi-Zhen Li, Hsuan-Chi Liang, Chia-Hsun Chen, Ching-Huang Chiu, Bo-Yen Lin, Jake A. Tan, Jiun-Haw Lee, Tien-Lung Chiu, Man-Kit Leung

Chemistry Faculty Publications

Thermally activated delayed fluorescence (TADF) is a promising approach to harvest triplet excitons and achieve high-performance organic light-emitting diodes (OLEDs) for displays. In this study, we synthesized two new TADF emitters, 4Ac25CzPy and 4Ac35CzPy, featuring acridan–pyrimidine–carbazole moieties. Remarkably, a slight modification in the carbazole group position enables precise control of luminous color, resulting in emissions at 483 nm and 494 nm for 4Ac25CzPy and 4Ac35CzPy, respectively, in the electroluminescent device. Both compounds exhibit small energy difference between their singlet and triplet states (DEST) of 0.14 eV and 0.15 eV, confirming their TADF characteristics. Notably, OLEDs utilizing 4Ac35CzPy achieve outstanding performance …

Design And Synthesis Of N-Succinyl-L,L-2.6-Diaminopimelic Acid Desuccinylase Inhibitors As Potential Novel Antibiotics, Thomas Dipuma

Master's Theses

N-Succinyl-L,L-2,6-Diaminopimelic Acid Desuccinylase (DapE) is a bacterial enzyme located in the lysine biosynthetic pathway of all Gram-negative and most Gram-positive species of bacteria including the notorious ESKAPE pathogens, or pathogenic strains of bacteria that have developed significant levels of resistance to currently available antibiotics. As a means to combat this challenge of growing antimicrobial resistance, we have identified the bacterial enzyme DapE as a conserved, novel enzymate target within these resistant bacterial strains,as DapE is responsible for the production of m-DAP and lysine which are ultimately employed in bacterial cell wall synthesis. The overall aim of this research is to …

The Impact Of Lead Corrosion Relating To The Contamination Of Drinking Water In Canada And In Indigenous Communities., Jessie A. Mcdonald

Corrosion Research

No abstract provided.

College Of Natural Sciences Newsletter, September - October 2023, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Page 1 Dean's Message
Page 2 New Faculty an Staff for the Fall 2023 Semester
Page 3 Awards
Page 4 Student Ambassadors in CNS
Page 5 Meet our Jacks
Page 6-8 Events
Page 9-11 Media Coverage of CNS
Page 12-13 Spring 2023 Dean's List
Page 14 Open PRAIRIE Data

The Coastal Monitor: Vol. 10 No. 2, John Tanacredi Ph.D.

The Coastal Monitor

Stephen J. Gould’s prophetic piece, “The Golden Rule: A Proper Scale for Our Environmental Crisis”, noted that, “Patience enjoys a long pedigree of favor”, which he elaborated, “usually involves a deep understanding of the fundamental principle… rarely grasped in daily life – the effects of scale.” Scientists observe changes incessantly, in dimensions and time, from microscopic conditions of cellular biology to the inconceivable distances of galaxies and their influences on Earth.

George C. Caldwell (1834-1907): American Agricultural Chemist, Pat Munday

Interdisciplinary Arts and Sciences Articles

George Caldwell served as president of the American Chemical Society (ACS) in 1892. Prior to this time, the ACS had been a rather parochial New York City based organization. In 1890, the constituency of the ACS expressed its desire to become a truly national body. Toward this end, it forged closer ties with the Chemical Section of the American Association for the Advancement of Science (AAAS), and merged with the Chemical Section in 1891. As Caldwell had been active with the AAAS group for several years previous to this merger, his election to the presidency of the ACS can be …

Development Of Cu-Catalyzed Oxidative Alkylboron Homocoupling, Dan Khazaei, Andrew Baggett, Katie Russell

Student Presentations

No abstract provided.

The Impact Of Lead Corrosion Relating To The Contamination Of Drinking Water In Canada And In Indigenous Communities., Jessie A. Mcdonald

Corrosion Research

No abstract provided.

Blood Coagulation Factor Ix: Purification, Activation, Crystallization, Juliet Mcgill

WWU Honors College Senior Projects

This paper presents readers with an optimized procedure for the purification, activation, and crystallization of selected blood coagulation Factor IX double mutant (FIX_2). Through the completion of this work, we aim to enhance future biochemical and structural studies by providing an easier means for the FIX_2 production, in order to increase understanding of the protein’s function within the blood coagulation cascade. The initiation of the blood coagulation cascade is brought on by activation of inactive Factor VIII (FVIII) protein though contact with tissue factor, the FVIII protein then binds to an activated platelet surface where it must wait for its …

Modulation Of Electrocatalytic Activity By Tuning Anion Electronegativity: Case Study With Copper Chalcogenides, Harish Singh, David Prendergast, Manashi Nath

Chemistry Faculty Research & Creative Works

Anion-tuning in metallic chalcogenides has been shown to have a significant impact on their electrocatalytic ability for overall water splitting. In this article, copper-based chalcogenides (Cu2 X, X= O, S, Se, and Te) have been systematically studied to examine the effect of decreasing anion electronegativity and increasing covalency on the electrocatalytic performance. Among the copper chalcogenides, Cu2Te has the highest oxygen evolution reaction (OER) activity and can sustain high current density of 10 and 50 mA cm−2 for 12 h. The difference in intrinsic catalytic activity of these chalcogenide surfaces have been also probed through density functional theory calculations, which …

Women As A Force Multiplier For Bringing Nuclear Forensic Capabilities To The International Stage, Heather M. Dion, Caterina Fox, Kim Knight, Anne Phillip

International Journal of Nuclear Security

In 2009, the US Department of Energy National Nuclear Security Administration’s (NNSA’s) Defense Nuclear Nonproliferation Program initiated a new nuclear forensics outreach effort under its Confidence Building Measures Program. Little did they know that the timing could not have been better. This article focuses on the early years (2009–2015) of the NNSA’s international nuclear forensics outreach, specifically the efforts and experiences of the women who helped establish this program, building it from a fledgling, bilateral effort into an enduring technical capacity provider engaging with dozens of countries and multilateral organizations. At the onset of the program, nuclear forensics was an …

Crystal Structure And Hirshfeld Surface Analysis Of Cyclo-Tetrabromido-1k2br,3k2br-Tetrakis(Pi2-2-{[(Pyridin-2-Yl)Methyl]Amino}Ethane-1-Thiolato-Krystal Structure And Hirshfeld Surface Analysis Ofcyclo-Tetrabromido-1j2br,3j2br-Tetrakis(L2-2-{[(Pyridin-2-Yl)Methyl]Amino}Ethane-1-Thiolato-K3n,S:S)Tetramercury(Ii), I. D. Thomas, K. R. Kocher, J. A. Viehweg, Robert Pike, Deborah Bebout

Arts & Sciences Articles

The macrometallacyclic title compound, [Hg4Br4(C8H11N2S)4] or [((HgL2)(HgBr2))2] (1) where HL = 2-{[(pyridin-2-yl)meth­yl]amino}­ethane-1-thiol, was prepared and structurally characterized. The Hg2+ complex crystallizes in the P21/c space group. The centrosymmetric Hg4S4 metallacycle is constructed from metal ions with alternating distorted tetra­hedral Br2S2 and distorted seesaw N2S2 primary coordination environments with pendant pyridyl groups. The backfolded extended chair metallacycle conformation suggests inter­actions between each of the bis-chelated mercury atoms and Br atoms lying above and below the central Hg2S4 plane. Supra­molecular inter­actions in 1 include a fourfold aryl embrace and potential hydrogen bonds with bromine as the acceptor. Hirshfeld surface analysis indicates that …

Depolymerizing Self-Immolative Polymeric Lanthanide Chelates For Vascular Imaging., Eric Grolman, Quinton E A Sirianni, Joy Dunmore-Buyze, Charmainne Cruje, Maria Drangova, Elizabeth R Gillies

Chemistry Publications

Medical imaging is widely used clinically and in research to understand disease progression and monitor responses to therapies. Vascular imaging enables the study of vascular disease and therapy, but exogenous contrast agents are generally needed to distinguish the vasculature from surrounding soft tissues. Lanthanide-based agents are commonly employed in MRI, but are also of growing interest for micro-CT, as the position of their k-edges allows them to provide enhanced contrast and also to be employed in dual-energy micro-CT, a technique that can distinguish contrast-enhanced blood vessels from tissues such as bone. Small molecule Gd3+ chelates are available, but are excreted …

Investigating Evidence In Support Of Validity And Reliability For Data Collected With The Meaningful Learning In The Laboratory Instrument (Mlli), Elizabeth Vaughan, A. Montoya-Cowan, Jack Barbera

Chemistry Faculty Publications and Presentations

The Meaningful Learning in the Laboratory Instrument (MLLI) was designed to measure students’ expectations before and after their laboratory courses and experiences. Although the MLLI has been used in various studies and laboratory environments to investigate students’ cognitive and affective laboratory expectations, the authors of the instrument reported a discrepancy between the intended factor structure of the MLLI and the factor structure suggested by the data collected in preliminary studies. Therefore, the aim of this study was to investigate the validity and reliability evidence related to data collected with the MLLI, especially that related to structural validity. Evidence to support …

Computational Investigation Of Mononuclear Iron Water Oxidation Catalyst Design, Kristal Stevens, Emily Jarvis

Chemistry and Biochemistry Faculty Works

Hydrogen production from non-carbon sources is an essential component of clean and sustainable technology for reducing greenhouse gas emissions from fuels. Water oxidation, which splits water molecules into hydrogen (protons) and molecular oxygen, is a thermodynamically challenging, multistep reaction achieved in photosynthetic organisms via photocatalysis by the Oxygen Evolving Complex (OEC) of Photosystem II. Mononuclear water oxidation catalysts that aim to mimic nature typically rely on heavy, rare metals such as ruthenium and iridium. Replacing these metals with iron is particularly appealing because it is abundant, benign, and inexpensive. We use density functional theory to characterize the catalytic ability of …

Improved Temperature Dependence Of Rate Coefficients For Rotational State-To-State Transitions In H2O + H2O Collisions, Bikramaditya Mandal, Dmitri Babikov

Chemistry Faculty Research and Publications

Aims. We present an improved database of temperature-dependent rate coefficients for rotational state-to-state transitions in H₂O + H₂O collisions. The database includes 231 transitions between the lower para-states of H₂O and 210 transitions between its lower ortho-states (up to j = 7) and can be employed in cometary and planetary applications up to the temperature of 1000 K.

Methods. We developed and applied a new general method that allows the generation of rate coefficients for excitation and quenching processes that automatically satisfy the principle of microscopic reversibility and also helps to cover …

Scandium Triflate-Catalyzed Aromatic Aldehydic C-H Activation, Nicholas Griffin

Honors Projects

Herein described is a scandium triflate-catalyzed C-H activation of commercially available aromatic aldehydes achieved in low yields. The reaction occured in a one-pot synthesis over a two-hour duration and required minimal purification. Inclusion of a fluorine-tagged phenol allowed for reaction monitoring via ¹⁹FNMR.

Metal Organic Frameworks (Mofs) Supported Single Atom Catalysts (Sacs) For Solar Fuel Conversion, Humphrey Chiromo

Dissertations (1934 -)

The continual reliance on non-renewable energy sources from fossil fuels to meet the world’s energy demand is causing serious environmental problems such as air pollution and global warming, hence there is a need of an alternative clean sustainable energy source. Exploration of clean sustainable renewable energies shows great promise to replace fossil fuels to meet global energy needs. Among the renewable energy sources, solar energy represents one of the most promising alternative energy sources due to its abundance and sustainability. However, the major challenge is the harvesting and storage of solar energy. One of the promising approaches to resolve these …

Structural, Functional And Biochemical Studies To Elucidate The Molecular Basis Of Xenobiotic Metabolism Of Tetranychus Uritcae, A Major Agricultural Pest, Ricardo Hernandez Arriaza

Theses and Dissertations

The two-spotted spider mite, Tetranychus urticae, is a major cosmopolitan pest that feeds on more than 1,100 plant species, including 150 crops. Such a wide host range indicates this mite’s unparalleled xenobiotic responsiveness that is also coincident with their ability to rapidly develop resistance to pesticides. An unprecedently large detoxifying machinery is one of the main biological traits responsible for their extraordinary adaptation potential and devastating effect on crops. Availability of the whole genome sequence revealed expansions in all major detoxifying families and demonstrated that this genome has been enriched by horizontally transferred genes from bacteria and fungi. Motivated by …

Investigation, Synthesis And Rational Design Of Novel Transuranic Containing Extended Structures, Adrian Thomas Hines

Theses and Dissertations

The use of nuclear technology has proven useful for energy generation and for weapons manufacturing, but disposal and storage of nuclear waste is an ongoing problem. The accumulation of nuclear waste over the past decades has yielded a vast amount of waste that must be dealt with, and with space at interim storage facilities diminishing, it has become increasingly important to find solutions to nuclear waste storage. The vitrification process has been widely accepted as a viable route for immobilization of high-level waste; however, the process is inadequate for complex waste streams and has many drawbacks such as limited waste …

Reactive Molecular Dynamics Of Large Systems: Quantum Dynamics With Adaptable Gaussian Bases; Hydroxide Diffusion In A Polymeric Environment, Mohottige Sachith Prasanga Wickramasinghe

Theses and Dissertations

This dissertation describes our research in theory and applications of reactive molecular dynamics. Quantum dynamics provides the foundation for understanding chemical processes. However, the computational cost of describing a general quantum system scales exponentially with the system size. Thus, an efficient basis representation of wavefunctions is essential. Time-dependent Gaussian bases are often employed to describe the large-amplitude motion of high-dimensional systems. The time dependence of such bases is typically determined by (i) the variational principle or by (ii) classical dynamics. But those approaches have shortcomings due to intrinsic singularity of the variational equations in the full basis limit or due …

Lithium Extraction From Aqueous Solution Using Magnesium Doped Lithium Ion-Sieve Composite, Ujjwal Pokharel

Civil & Environmental Engineering Theses & Dissertations

This study focused on the development of a magnesium doped ion-sieve composite to extract lithium from an aqueous solution using adsorption process. The extraction process will provide a sustainable alternative to the currently practiced solar evaporation/concentration method which is very slow (takes 24 months) and water intensive. Currently, most of the lithium in the world comes from the mining of lithium or from the evaporative extraction process from the brine. Additionally, the Salton Sea area geothermal brines are recognized as potentially important domestic sources of lithium. Lithium concentration in geothermal brines from the Salton Sea area is reported to be …

A Work Towards A Single-Bridge Hydrazine Sensor, Brenden Jay Schmeltz

Theses and Dissertations

Hydrazine can currently be detected by irreversible methods, Carbazolopyridinophane (2,18-Dithia[3][1,8]carbazolo[3][2,6]pyridinophane) CP was synthesized by Brown et al. to detect hydrazine in real-time while also being reversible. The threshold for detection was 100 ppb, regulatory use requires 10 ppb as this is when permanent damage to humans can be caused. A more sensitive sensor will allow for safer workplaces for many people. A single, 3-atom bridge sensor will further examine the photophysical capabilities of carbazole-pyridine as an emitter/quencher pair. 1-Carbazole-1-methylpyridyl-2methyl sulfide SBCP will allow freedom of rotation as well as the bending of the bridge. These benefits will introduce conformers which …

Structural Insights Into The Cl-Par-4 Protein: Ionic Requirements, Conformational Transitions, And Interaction With Cisplatin, Krishna Kumar Raut

Chemistry & Biochemistry Theses & Dissertations

Cancer continues to be the leading global cause of death, with challenges in early diagnosis, drug resistance, non-specific drug targeting, and cancer recurrence and metastasis posing formidable obstacles in cancer therapy. In this context, Prostate Apoptosis Response-4 (Par-4), a pro-apoptotic tumor suppressor protein, emerged as a promising therapeutic target due to its ability to selectively induce apoptosis in cancer cells, thereby minimizing the drug-associated adverse effects. However, a comprehensive understanding of the structural features of Par-4, specifically the caspase-cleaved fragment (cl-Par-4), is crucial for therapeutic advancements.

This dissertation investigated the effects of various ions, both monovalent and divalent, on the …

Enhanced Cell Viability And Migration Of Primary Bovine Annular Fibrosus Fibroblast-Like Cells Induced By Microsecond Pulsed Electric Field Exposure, Prince M. Atsu, Connor Mowen, Gary L. Thompson Iii

Henry M. Rowan College of Engineering Departmental Research

This study is the first to report the enhancement of cell migration and proliferation induced by in vitro microsecond pulsed electric field (μsPEF) exposure of primary bovine annulus fibrosus (AF) fibroblast-like cells. AF primary cells isolated from fresh bovine intervertebral disks (IVDs) are exposed to 10 and 100 μsPEFs with different numbers of pulses and applied electric field strengths. The results indicate that 10 μs-duration pulses induce reversible electroporation, while 100 μs pulses induce irreversible electroporation of the cells. Additionally, μsPEF exposure increased AF cell proliferation up to 150% while increasing the average migration speed by 0.08 μm/min over 24 …