Physical Sciences and Mathematics Commons^™

Comt Chesapeake Bay Hypoxia Modeling, M.A.M. Friedrichs, Carl T. Friedrichs, M. Scully, I. Irby, Comt Estaurine Hypoxia Team

Presentations

No abstract provided.

University Of New Mexico Model Data Sources, Social Natural Science Nexus (Historic Domestic Oil And Gas Production From Eia-Oil And Gas Historic Production), Janie Chermak

Energize New Mexico (NSF EPSCoR Track 1 IV)

Historic domestic production of crude oil and natural gas obtained from the EIA. Historic domestic production data will be included in predictive model.

University Of New Mexico Model Data Sources, Social Natural Science Nexus (Oil, Gas, And Water Production Statistics By Well 2013-2015-Oil And Gas Wells), Janie Chermak

Energize New Mexico (NSF EPSCoR Track 1 IV)

This spreadsheet contains oil, gas, and water production and injection data by well API from 2013-2015. This is original data obtained from the NM OCD FTP site. Location and characteristics of producing wells in the state of NM intended to use in production model.

University Of New Mexico Model Data Sources, Social Natural Science Nexus (Henry Hub Natural Gas Spot Price-Hh Natural Gas Spot Price), Janie Chermak

Energize New Mexico (NSF EPSCoR Track 1 IV)

This spreadsheet contains the Henry Hub natural gas spot price from the Energy Information Administration (EIA). This data will be used in model calibration and system of equations design for projected NG production.

Creating Art Patterns With Math And Code, Boyan Kostadinov

Publications and Research

The goal of this talk is to showcase some visualization projects that we developed for a 3-day Code in R summer program, designed to inspire the creative side of our STEM students by engaging them with computational projects that we developed with the purpose of mixing calculus level math and code to create complex geometric patterns. One of the goals of this program was to attract more minority and female students into applied math and computer science majors.

The projects are designed to be implemented using the high-level, open-source and free computational environment R, a popular software in industry for …

Raw Data Sets For Nascent-Denuded Soot - Image Analysis, Claudio Mazzoleni, Janarjan Bhandari

Department of Physics Publications

These data sets have been used for the paper "Effect of thermodenuding on the structure of nascent flame soot aggregates," submitted for publication on August 23, 2016.

Land Cover Data For The Mississippi-Alabama Barrier Islands, 2010-2011 Arcgis V10.3 Geodatabase, Gregory A. Carter, Carlton P. Anderson, Kelly L. Lucas, Nathan L. Hopper

Land Cover Data for the Mississippi-Alabama Barrier Islands, 2010-2011

Land cover on the Mississippi-Alabama barrier islands was surveyed in 2010-2011 as part of continuing research on island geomorphic and vegetation dynamics following the 2005 impact of Hurricane Katrina. Results of the survey include sub-meter GPS location, a listing of dominant vegetation species and field photographs recorded at 375 sampling locations distributed among Cat, West Ship, East Ship, Horn, Sand, Petit Bois and West Dauphin Islands. The survey was conducted in a period of intensive remote sensing data acquisition over the northern Gulf of Mexico by federal, state and commercial organizations in response to the 2010 Macondo Well (Deepwater Horizon) …

Modeling The Global Atmospheric Transport And Deposition Of Mercury To The Great Lakes, Mark D. Cohen, Roland R. Draxler, Richard S. Artz, Pierrette Blanchard, Mae Sexauer Gustin, Young-Ji Han, Thomas M. Holsen, Daniel A. Jaffe, Paul Kelley, Hang Lei, Christopher P. Loughner, Winston T. Luke, Seth N. Lyman, David Niemi, Jozef M. Pacyna, Martin Pilote, Laurier Poissant, Dominique Ratte, Xinrong Ren, Frits Steenhuisen, Alexandra Steffen, Rob Tordon, Simon J. Wilson

USU Uintah Basin Faculty Publications

Mercury contamination in the Great Lakes continues to have important public health and wildlife ecotoxicology impacts, and atmospheric deposition is a significant ongoing loading pathway. The objective of this study was to estimate the amount and source-attribution for atmospheric mercury deposition to each lake, information needed to prioritize amelioration efforts. A new global, Eulerian version of the HYSPLIT-Hg model was used to simulate the 2005 global atmospheric transport and deposition of mercury to the Great Lakes. In addition to the base case, 10 alternative model configurations were used to examine sensitivity to uncertainties in atmospheric mercury chemistry and surface exchange. …

Apex Calculus Exercises (Webwork), Shaun V. Ault

Mathematics Ancillary Materials

These exercises are designed to be used in the open-source WeBWorK platform by the Mathematical Association of America. The exercises are meant to supplement the APEX Calculus 3.0 open textbook, and each folder's number corresponds to the textbook's chapters and subchapters.

Comparison Of Modeled And Observed Bed Erodibility In The York River Estuary, Virginia, Over Varying Time Scale, Danielle Tarpley, Courtney Harris, Carl Friedrichs

Presentations

In general, the availability of sediment for transport increases with the magnitude of bed shear stress, which varies over various temporal and spatial scales. However, in a muddy setting, consolidation or swelling of the bed also contributes to fluctuations in sediment mobility. One such environment is the York River estuary, a partiallymixed tidal tributary of the Chesapeake Bay, USA. The York River often has a Secondary Turbidity Maximum (STM) mid-estuary at the transition from a shallower, less stratified section upstream to a deeper, more stratified section downstream. Since 2006 various instrument arrays have been deployed as part of the Multidisciplinary …

Us-Ioos/Comt Estuarine Hypoxia Nowcast/Forecast Product: Identification And Feedback, Carl T. Friedrichs, Marjorie A.M. Friedrichs, David R. Forrest, R.R. Hood

Presentations

The Estuarine Hypoxia component of the U.S. Integrated Ocean Observing System (US-IOOS) Coastal and Ocean Modeling Testbed (COMT) is evaluating existing hydrodynamic and water quality models used or likely to be used for operations and/or for regulation in the Chesapeake Bay and other, similar estuarine environments. The outcomes of this work are expected to help with the development of operational hypoxia forecast capabilities for the Bay. As a proof-of-concept, the ChesROMS hydrodynamic model, linked to a 1-term constant respiration equation for dissolved oxygen (DO), is presently being used to produce realtime now-casts and shortterm (3-day) forecasts of DO for the …

Hill's Diagrammatic Method And Reduced Graph Powers, Gregory D. Smith, Richard Hammack

Biology and Medicine Through Mathematics Conference

No abstract provided.

Explicitly Separating Growth And Motility In A Glioblastoma Tumor Model, Tracy Stepien, Erica Rutter, Meng Fan, Yang Kuang

Biology and Medicine Through Mathematics Conference

No abstract provided.

Force Generation And Contraction Of Random Actomyosin Bundles., Dietmar B. Oelz

Biology and Medicine Through Mathematics Conference

No abstract provided.

Intramolecular Reductive Heck Approach To Guaipyridine Alkaloids, Samantha Grosslight, Hope Spargo

Scholars Week

The guaipyridine alkaloids are a family of compounds that all share an unusual carbon structure, whose source plants have been used as a traditional medicine in Southeast Asia. Members of the guaipyridine family include cananodine and the rupestines. Cananodine has been isolated from the fruits of the Canaga odorata in Indonesia, Malaysia and the Philippines. Cananodine has been used of decades as a traditional medicine for the treatment of malaria, infections and fever. Studies of cananodine’s biological activity have reveled activity against Hep G2 and Hep 2,2,15 human hepatocarcinoma cell lines, the most common types of liver cancer. Due to …

Gold Catalyzed Lactonization Of Epoxide Esters, Carlos Enciso Lopez

Scholars Week

Lactones are cyclic esters of varying ring size that occur naturally in organic compounds. Organic structures such as these have various useful biological activities applicable to antibacterial drugs, potential anticancer drugs, and participants of metabolic processes. Gold catalysts Au(I) and Au(III) are shown in our experiments to be effective in inducing intramolecular lactonization of epoxide esters to form desired lactone products. In our experiments gold catalysts coordinated with epoxides to develop a positive charge on the carbon nearest to the carbonyl. The result is an intramolecular lactonization of the ester via nucleophilic attack of the carbonyl oxygen onto the positive …

Consolidation And Stratification Within A Muddy, Partially Mixed Estuary: A Comparison Between Idealized And Realistic Models For Sediment Transport In The York River Estuary, Virginia, Danielle Tarpley, Courtney Harris, Carl Friedrichs

Presentations

The York River estuary is a partially mixed semi-diurnal tidal tributary of the Chesapeake Bay with salinities ranging from 0 to 26 psu and an ~0.8 m tidal range. Sediment within many estuaries, including the York River, Virginia, is dominated by mixtures of mud. Due to its cohesive nature, estimating sediment fluxes for mud is a complex problem that can be addressed using numerical models such as the Community Sediment Transport Modeling System (CSTMS), which incorporates suspended sediment transport, erosion, and deposition within the hydrodynamic Regional Ocean Modeling System (ROMS). One version of the CSTMS accounts for cohesive processes via …

2016-01-A3dsrinp-Csc-Sta-Cmb-522-Bps-542, Raymond Pulver, Neal Buxton, Xiaodong Wang, John Lucci, Jean Yves Hervé, Lenore Martin

Bioinformatics Software Design Projects

Cholesterol is carried and transported through bloodstream by lipoproteins. There are two types of lipoproteins: low density lipoprotein, or LDL, and high density lipoprotein, or HDL. LDL cholesterol is considered “bad” cholesterol because it can form plaque and hard deposit leading to arteries clog and make them less flexible. Heart attack or stroke will happen if the hard deposit blocks a narrowed artery. HDL cholesterol helps to remove LDL from the artery back to the liver.

Traditionally, particle counts of LDL and HDL plays an important role to understanding and prediction of heart disease risk. But recently research suggested that …

Record Of Paleofluid Circulation In Faults Revealed By Hematite (U-Th)/He And Apatite Fission-Track Dating: An Example From Gower Peninsula Fault Fissures, Wales, Alexis K. Ault, Max Frenzel, Peter W. Reiners, Nigel H. Woodcock, Stuart N. Thomson

Geosciences Faculty Publications

Fault rock low-temperature thermochronometry can inform the timing, temperature, and significance of hydrothermal fluid circulation in fault systems. We demonstrate this with combined hematite (U-Th)/He (He) dating, and sandstone apatite fission-track (AFT) and apatite and zircon (U-Th)/He (He) thermochronometry from fault-related fissures on the Gower Peninsula, Wales. Hematite He dates from 141 ± 5.1 Ma to 120 ± 5.0 Ma overlap with a 131 ± 20 Ma sandstone infill AFT date. Individual zircon He dates are 402–260 Ma, reflecting source material erosion, and imply a maximum Late Permian infill depositional age. Burial history reconstruction reveals modern exposures were not buried …

Geomechanical Analysis Of Rock Brittleness With Comparisons To The Mineralogical Brittleness Index, Derek Bammel

Earth & Environmental Sciences Theses

A significant area of research within the Oil and Gas industry centers around the understanding of rock brittleness and fracture mechanics related to inducing and extending hydraulic fractures. This study defines rock brittleness as the fracture density, or the fracture surface area per unit volume (m-1), at a particular strain state. The first goal of this research was to test whether or not the strain conditions of various rock layers were constant using a geomechanically derived equation, ����������24��2(1+��)=����1−2��+��, where Fd is fracture density, Kic is fracture toughness, u is the shear modulus, v is Poisson’s Ratio, and A and B …

Identification Of Suspended Resilient Pellets In Particles Tracked By A Particle Image Camera System (Pics) In A Muddy Estuary, Grace M. Massey, Kelsey Fall, Carl Friedrichs, S.J. Smith

Presentations

No abstract provided.

Hypoxia Forecasts As A Tool For Chesapeake Bay Fisheries, Marjorie A.M. Friedrichs, Carl T. Friedrichs, David R. Forrest, R.R. Hood

Presentations

No abstract provided.

Titanium-Oxides As A Stabilizing Agent For Environmentally Persistent Free Radicals (Epfrs), Josef Baylis

Scholarly and Creative Works Conference (2015 - 2021)

The mechanism of formation for surface bound radicals were studied using ab initio quantum methods. The shift in electron density from transition metal surfaces to surface bound radical groups was studied to learn the mechanism for the binding. Results indicate an oxidation-reduction based mechanism of formation.

Examining Spring-Neap Cycle Variation In Bed Erodibility In The York River Estuary, Va: A Numerical Study, Danielle Tarpley, Courtney Harris, Carl Friedrichs

Presentations

The York River estuary is categorized as micro-tidal with a tidal range ~0.8 m; however, periodically produce enough shear stress to erode sediment from the bed and redistribute it along the estuary. However, the supply of mobile sediment differs over various temporal and spatial scales. The primary focus here is to examine the tidal variation in bed mobility by comparing variations in bed erodibility over the spring-neap cycle. To accomplish this goal, the Community Sediment Transport Modeling System (CSTMS) is implemented in a three-dimensional domain using the Regional Ocean Modeling System (ROMS). This version of the CSTMS accounts for suspended …

Influence Of Suspended Particle Properties On Optical Properties And Resultant Water Clarity Along A Partially-Mixed Estuary, York River, Virginia, Usa, Kelsey Fall, Carl Friedrichs, Grace M. Cartwright, David Bowers

Presentations

The Chesapeake Bay and its associated tidal tributaries are among the many coastal systems where degraded water clarity is a major concern. Despite long-term decreases in sediment input, water clarity has continued to deteriorate, especially in the southern Bay. Here it is proposed that the disconnect between water clarity and sediment input is related to the dynamic nature of locally suspended estuarine particles, as well as the interaction between suspended organic particles and inorganic solids. Typical estuarine particles are not single solid particles, but clusters of inorganic and organic particles and water (i.e., flocs). Floc properties (such as size, composition, …

What Controls Bed Erodibility In Muddy, Partially-Mixed Estuaries? Insights From The York River, Virginia, Carl Friedrichs, Grace M. Cartwright, P.J. Dickhudt, Kelsey Fall

Presentations

Appropriate parameterization of time-dependent erodibility of muddy seabeds is a significant barrier to improved understanding and accurate modeling of sediment dynamics in estuaries and other coastal regions. In an effort to better understand controls on muddy seabed erodibility, bed erodibility and associated bed sediment properties have been measured by our group on cores collected on dozens of cruises over the last decade in the York Estuary. We have also inferred time-varying erodibility indirectly in the York Estuary over several years by vertically integrating observations of tidally-varying suspended sediment concentration. This presentation synthesizes the results of these long-term observations in this …

Controls On Suspended Particle Properties And Water Clarity Along A Partially-Mixed Estuary, York River, Virginia, Kelsey Fall, Carl Friedrichs, Grace M. Cartwright, David Bowers

Presentations

The Chesapeake Bay and its associated tidal tributaries, which together form one of the United States’ largest and most important estuaries, are among the many coastal systems where degraded water clarity is a major concern. Despite long-term decreases in sediment input, water clarity has continued to deteriorate in the southern Bay. Paradoxically, clarity has declined less in the northern Bay where riverine sediment load has recently increased. Here it is proposed that the disconnect between water clarity and sediment input is related to the dynamic nature of locally suspended estuarine particles, as well as the interaction between suspended organic particles …

What Controls Bed Erodibility In Muddy, Partially-Mixed Estuaries? Insights From The York River, Virginia, Carl Friedrichs, Grace M. Cartwright, P.J. Dickhudt, Kelsey Fall

Presentations

Appropriate parameterization of time-dependent erodibility of muddy seabeds is a significant barrier to improved understanding and accurate modeling of sediment dynamics in estuaries and other coastal regions. In an effort to better understand controls on muddy seabed erodibility, bed erodibility and associated bed sediment properties have been measured by our group on cores collected on dozens of cruises over the last decade in the York Estuary. We have also inferred time-varying erodibility indirectly in the York Estuary over several years by vertically integrating observations of tidally-varying suspended sediment concentration. This presentation synthesizes the results of these long-term observations in this …

Studies Of The Solid-Phase Pauson-Khand Reaction Selective In-Situ Enone Reduction To 3-Azabicyclo[3.3.0]Oct-Anones, Daniel Becker, Daniel L. Flynn

Daniel P. Becker

The Smit-Caple DSAC Pauson-Khand cyclization of a series of N-protected allyl propargyl amines in the absence of oxygen gave rise to formation of the saturated azabicyclo[3.3.0]octanones in excellent yields. Standard cyclization in air gave mixtures of saturated and unsaturated ketones.

Synthesis Of N-Boc-3-Azabicyclo[3.3.0]Octan-7-One Via Reductive Pauson-Khand Cyclization And Subsequent Conversion To A Novel Diazatricyclic Ring System, Daniel Becker, Daniel L. Flynn

Daniel P. Becker

An intramolecular reductive Pauson-Khand reaction of the hexacarbonyldicobalt complex of N-(tert-butyloxycarbonyl)allylpropargylamine under dry-state adsorption conditions directly afforded the saturated N-BOC-3-azabicyclo[3.3.0]octan-7-one when the reaction was performed under an inert atmosphere. This bicyclic ketone was converted in several steps to the novel octahydro-1-azeto[2′,3′:3,4]cyclopenta[1,2-C]pyrrole ring system as confirmed by single crystal X-ray analysis.