Physical Sciences and Mathematics Commons^™

Responsive Materials Via Diels-Alder Chemistry, Gregory Alan Strange

Master's Theses

The corrosion of infrastructure imposes a significant monetary cost, and at times human cost, upon society. Methods to improve corrosion resistance of materials are described herein which utilize the reversibility of the Diels-Alder reaction to impart thermal responsiveness upon materials. Such stimuli responsiveness can potentially play a role in self healing properties which lead to reduced cracking and thus increased corrosion protection.

Reversible Diels-Alder chemistry was utilized to manipulate the surface energy of glass substrates. Hydrophobic dieneophiles were prepared and attached to glass slides and capillaries to yield a nonwetting surface. Thermal treatment of the surfaces cleaved the Diels-Alder linkage, …

Evaluating Geomorphic Change In Little Creek Using Repeated Cross-Sectional And Longitudinal Profile Surveys, Drew Allen Perkins

Master's Theses

Six geomorphic study reaches were established in 2002 along a forested mountain stream (gradients range from 0.02 to 0.05) on Cal Poly's Swanton Pacific Ranch in Santa Cruz County, California. These study reaches are a component of paired and nested watershed studies in the approximately 500 hectare Little Creek watershed. The overall goal of this study was to monitor water quality and channel conditions before, during, and after a selective harvest of redwood. A selective harvest occurred in the North Fork of Little Creek in Summer 2008. In August 2009, approximately 90% of the Little Creek Watershed was burned in …

Improving First-Year Success And Retention Through Interest-Based Cs0 Courses, Michael Haungs, Christopher Clark, John Clements, David Janzen

Computer Science and Software Engineering

Many computer science programs suffer from low student retention rates. At Cal Poly San Luis Obispo, academic performance and retention rates among first year computer science students are among the lowest on campus.

In order to remedy this, we have developed a new CS0 course featuring different "tracks" that students can choose from (e.g. robotics, gaming, music, mobile apps). This allows students to learn the basics of programming, teamwork, and college-level study in a domain that is of personal interest. In addition, the course relies on classic Project-based Learning (PBL) approaches as well as a focus on both academic and …

Cross Teaching Parallelism And Ray Tracing: A Project-Based Approach To Teaching Applied Parallel Computing, Chris Lupo, Zoë J. Wood, Christine Victorino

Computer Science and Software Engineering

Massively parallel Graphics Processing Unit (GPU) hardware has become increasingly powerful, available and affordable. Software tools have also advanced to the point that programmers can write general purpose parallel programs that take advantage of the large number of compute cores available in the hardware. With literally hundreds of compute cores available on a single device, program performance can increase by orders of magnitude. We believe that introducing students to the concepts of parallel programming for massively parallel hardware is of increasing importance in an undergraduate computer science curriculum. Furthermore, we believe that students learn best when given projects that reflect …

The Galaxy Zoo Survey For Giant Agn-Ionized Clouds: Past And Present Black Hole Accretion Events, William C. Keel, Drew Chojnowski, Vardha N. Bennert, Kevin Schawinski, Chris J. Lintott, Stuart Lynn, Anna Pancoast, Chelsea Harris, A. M. Nierenberg, Alessandro Sonnenfeld, Richard Proctor

Physics

Some active galactic nuclei (AGN) are surrounded by extended emission-line regions (EELRs), which trace both the illumination pattern of escaping radiation and its history over the light travel time from the AGN to the gas. From a new set of such EELRs, we present evidence that the AGN in many Seyfert galaxies undergo luminous episodes 0.2–2 ×105 years in duration. Motivated by the discovery of the spectacular nebula known as Hanny’s Voorwerp, ionized by a powerful AGN which has apparently faded dramatically within ≈ 105 years, Galaxy Zoo volunteers have carried out both targeted and serendipitous searches for similar emission-line …

Novel Magnetite-Producing Magnetotactic Bacteria Belonging To The Gammaproteobacteria, Christopher T. Lefèvre, Nathan Viloria, Marian L. Schmidt, Mihály Pósfai, Richard B. Frankel, Dennis A. Bazylinski

Physics

Two novel magnetotactic bacteria (MTB) were isolated from sediment and water collected from the Badwater Basin, Death Valley National Park and southeastern shore of the Salton Sea, respectively, and were designated as strains BW-2 and SS-5, respectively. Both organisms are rod-shaped, biomineralize magnetite, and are motile by means of flagella. The strains grow chemolithoautotrophically oxidizing thiosulfate and sulfide microaerobically as electron donors, with thiosulfate oxidized stoichiometrically to sulfate. They appear to utilize the Calvin–Benson–Bassham cycle for autotrophy based on ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) activity and the presence of partial sequences of RubisCO genes. Strains BW-2 and SS-5 biomineralize chains of octahedral …

Run Your Research: On The Effectiveness Of Lightweight Mechanization, Casey Klein, John Clements, Christos Dimoulas, Carl Eastlund, Matthias Felleisen, Matthew Flatt, Jay A. Mccarthy, Jon Rafkind, Sam Tobin-Hochstadt, Robert Bruce Findler

Computer Science and Software Engineering

Formal models serve in many roles in the programming language community. In its primary role, a model communicates the idea of a language design; the architecture of a language tool; or the essence of a program analysis. No matter which role it plays, however, a faulty model doesn't serve its purpose.

One way to eliminate flaws from a model is to write it down in a mechanized formal language. It is then possible to state theorems about the model, to prove them, and to check the proofs. Over the past nine years, PLT has developed and explored a lightweight version …

Fully Enclosed Microfluidic Paper-Based Analytical Devices, Kevin M. Schilling, Anna L. Lepore, Jason A. Kurian, Andres W. Martinez

Chemistry and Biochemistry

This article introduces fully enclosed microfluidic paper-based analytical devices (microPADs) fabricated by printing toner on the top and bottom of the devices using a laser printer. Enclosing paper-based microfluidic channels protects the channels from contamination, contains and protects reagents stored on the device, contains fluids within the channels so that microPADs can be handled and operated more easily, and reduces evaporation of solutions from the channels. These benefits extend the capabilities of microPADs for applications as low-cost point-of-care diagnostic devices.

First Record Of Serropalpus Substriatus Haldeman, 1848 (Coleoptera: Melandryidae) On Giant Sequoia, Sequoiadendron Giganteum (Lindl.) J. Buchholz (Cupressaceae): New Larval Host, Kim S. Camilli, Joshua D. Soderlund, David Wood, Jim Kral, Douglas D. Piirto

Natural Resources Management and Environmental Sciences

No abstract provided.

Measuring Ecological Impact Of Water Consumption By Bioethanol Using Life Cycle Impact Assessment, Yi-Wen Chiu, Sangwon Suh, Stephan Pfister, Stefanie Hellweg, Annette Koehler

Natural Resources Management and Environmental Sciences

Purpose

Though the development of biofuel has attracted numerous studies for quantifying potential water demand applying life cycle thinking, the impacts of biofuel water consumption still remain unknown. In this study, we aimed to quantify ecological impact associated with corn-based bioethanol water consumption in Minnesota in responding to different refinery expansion scenarios by applying a life cycle impact assessment method.

Methods

This ecological damage assessment method for quantifying water consumption impacts was proposed by Pfister et al. in 2009 (Environ Sci Technol 43: 4098–4104, 2009) using an impact characterization factor integrating terrestrial net primary production and precipitation. In …

Soil Mapping On A Swanton Pacific Ranch Rangeland, Thomas N. Witman

Natural Resources Management and Environmental Sciences

Knowledge of soils has become very important in most land based enterprises. The understanding of soils is necessary for all different types of land management projects. The USDA mapped all of the soils in the United States starting in the late 1950’s to provide the necessary information. However because the mappers often times had to map entire counties in short amounts of time ,did not have modern technology, and had rather a vague operating procedure, there was no way to be accurate on the small scaled. To solve this problem I evaluated Dr. Ron Taskey’s landscape hierarchy, a method that …

Β-Casein–Phospholipid Monolayers As Model Systems To Understand Lipid–Protein Interactions In The Milk Fat Globule Membrane, Sophie Gallier, Derek E. Gragson, Rafael Jiménez-Flores, David W. Everett

Chemistry and Biochemistry

Phospholipid–protein monolayer films were studied as model systems to mimic the structure of the native bovine milk fat globule membrane (MFGM) and to understand lipid–protein interactions at the surface of the globule. Phospholipids extracted from bovine raw milk, raw cream, processed milk and buttermilk powder were spread onto the air–water interface of a Langmuir trough, β-casein was then added to the sub-phase, and Langmuir–Blodgett films were studied by epifluorescence microscopy and atomic force microscopy. In all films, β-casein was responsible for clustering of the sphingomyelin- and cholesterol-rich microdomains into larger platforms. This suggests that the same phenomenon may happen at …

Forum History At Forty (2012), David Hafemeister

Physics

Physics is a major component of many of society's difficult issues: nuclear arms and their proliferation, energy shortages and energy impacts, climate change, and technical innovation. Because physics principles underlie so many of these societal issues and because physics offers a way to quantify some aspects of them, members of the American Physical Society (APS) should be encouraged to understand, analyze and debate them. This is precisely why APS members formed the Forum on Physics and Society (FPS). To those of us who have been involved in FPS affairs for a long time, it seems like only yesterday that we …

Very Early Ultraviolet And Optical Observations Of The Type Ia Supernova 2009ig, Ryan J. Foley, P. J. Challis, A. V. Filippenko, M. Ganeshalingam, W. Landsman, W. Li, G. H. Marion, J. M. Silverman, R. L. Beaton, V. N. Bennert, S. B. Cenko, M. Childress, P. Guhathakurta, L. Jiang, J. S. Kalirai, R. P. Kirshner, A. Stockton, E. J. Tollerud, J. Vinkó, J. C. Wheeler, J.-H. Woo

Physics

Supernova (SN) 2009ig was discovered 17 hr after explosion by the Lick Observatory Supernova Search, promptly classified as a normal Type Ia SN (SN Ia), peaked at V = 13.5 mag, and was equatorial, making it one of the foremost SNe for intensive study in the last decade. Here, we present ultraviolet (UV) and optical observations of SN 2009ig, starting about 1 day after explosion until around maximum brightness. Our data include excellent UV and optical light curves, 25 premaximum optical spectra, and 8 UV spectra, including the earliest UV spectrum ever obtained of an SN Ia. SN 2009ig is …

Using Etf Data To Monitor Systemic Risk, Melissa A. Siemer, Brett Amidan

STAR Program Research Presentations

In 2010, President Obama signed The Dodd-Frank Wall Street Reform and Consumer Protection Act, which requires financially based government agencies and 35 major US banks to monitor systemic risk. This was in response to the recent near financial collapse due to major mistakes made by organizations generally considered "too big to fail". Systemic risk is the risk of the collapse of an entire financial system or market. It refers to the risks imposed by interdependencies in a system or market, where the failure of a single entity or cluster of entities can cause a cascading failure. In April 2011, the …

An Approach To Study The Effect Of Harvest And Wildfire On Watershed Hydrology And Sediment Yield In A Coast Redwood Forest, Christopher G. Surfleet, Arne Skaugset, Brian Dietterick

Natural Resources Management and Environmental Sciences

The Little Creek watershed, within California State Polytechnic University’s Swanton Pacific Ranch, is the location of a paired and nested watershed study to investigate the watershed effects of coast redwood forest management. Streamflow, suspended sediment, and stream turbidity have been collected during storms at two locations on the North Fork Little Creek and at the outlet of South Fork Little Creek from 2002 until present. In 2008, the watershed area between the two monitoring stations on the North Fork Little Creek watershed was harvested with an individual tree selection silvicultural system within the Santa Cruz County Rules of the California …

Exploring The Physics With Computer Animation, T. J. Bensky

Physics

No abstract provided.

Review Of Ola Dahlman Et Al., Detect And Deter: Can Countries Verify The Nuclear Test Ban, David Hafemeister

Physics

No abstract provided.

Fluid Elasticity Can Enable Propulsion At Low Reynolds Number, Nathan C. Keim, Mike Garcia, Paulo E. Arratia

Physics

Conventionally, a microscopic particle that performs a reciprocal stroke cannot move through its environment. This is because at small scales, the response of simple Newtonian fluids is purely viscous and flows are time-reversible. We show that by contrast, fluid elasticity enables propulsion by reciprocal forcing that is otherwise impossible. We present experiments on rigid objects actuated reciprocally in viscous fluids, demonstrating for the first time a purely elastic propulsion set by the object’s shape and boundary conditions. We describe two different artificial “swimmers” that experimentally realize this principle.

Optical Mode Pattern Study Of Gan Based Leds With And Without Nanoscale Top Grating, Gregory Chavoor

Electrical Engineering

This study analyzes optical confinement factor and light emitting mode order for three different GaN LEDs: a conventional LED, thin Film LED, and thin Film LED with a photonic crystal (PhC) grating. For the first structure, we increase the thickness of Al_xGa_1-xN from 0 to 600nm, alter the x composition in Al_xGa_1-xN from 0.05 to 0.2 in steps of 0.05, and adjust the p-GaN and n-GaN thicknesses each from 0 to 200nm. For the second structure, we alter the n-GaN substrate thickness from 300-1000nm in steps of 100nm and 1000-4000nm in steps …

Automatic Document Classification In Small Environments, Jonathan David Mcelroy

Master's Theses

Document classification is used to sort and label documents. This gives users quicker access to relevant data. Users that work with large inflow of documents spend time filing and categorizing them to allow for easier procurement. The Automatic Classification and Document Filing (ACDF) system proposed here is designed to allow users working with files or documents to rely on the system to classify and store them with little manual attention. By using a system built on Hidden Markov Models, the documents in a smaller desktop environment are categorized with better results than the traditional Naive Bayes implementation of classification.

A Cultured Greigite-Producing Magnetotactic Bacterium In A Novel Group Of Sulfate-Reducing Bacteria, Christopher T. Lefèvre, Nicholas Menguy, Fernanda Abreu, Ulysses Lins, Mihály Pósfai, Tanya Prozorov, David Pignol, Richard B. Frankel, Dennis A. Bazylinski

Physics

Magnetotactic bacteria contain magnetosomes—intracellular, membrane-bounded, magnetic nanocrystals of magnetite (Fe₃O₄) or greigite (Fe₃S₄)—that cause the bacteria to swim along geomagnetic field lines. We isolated a greigite-producing magnetotactic bacterium from a brackish spring in Death Valley National Park, California, USA, strain BW-1, that is able to biomineralize greigite and magnetite depending on culture conditions. A phylogenetic comparison of BW-1 and similar uncultured greigite- and/or magnetite-producing magnetotactic bacteria from freshwater to hypersaline habitats shows that these organisms represent a previously unknown group of sulfate-reducing bacteria in the Deltaproteobacteria. Genomic analysis of BW-1 reveals …

Veritas Observations Of Gamma-Ray Bursts Detected By Swift, V. A. Acciari, E. Aliu, T. Arlen, T. Aune, M. Beilicke, W. Benbow, S. M. Bradbury, J. H. Buckley, V. Bugaev, K. Byrum, A. Cannon, A. Cesarini, J. L. Christiansen, L. Ciupik, E. Collins-Hughes, M. P. Connolly, W. Cui, C. Duke, M. Errando, A. Falcone, J. P. Finley, G. Finnegan, L. Fortson, A. Furniss, N. Galante, D. Gall, S. Godambe, S. Griffin, J. Grube, R. Guenette, G. Gyuk, D. Hanna, J. Holder, G. Hughes, C. M. Hui, T. B. Humensky, D. J. Jackson, P. Kaaret, N. Karlsson, M. Kertzman, D. Kieda, H. Krawczynski, F. Krennrich, M. J. Lang, A. S. Madhavan, G. Maier, S. Mcarthur, A. Mccann, P. Moriarty, M. D. Newbold, R. A. Ong, M. Orr, A. N. Otte, N. Park, J. S. Perkins, M. Pohl, H. Prokoph, J. Quinn, K. Ragan, L. C. Reyes, P. T. Reynolds, E. Roache, H. J. Rose, J. Ruppel, D. B. Saxon, M. Schroedter, G. H. Sembroski, G. D. Şentürk, A. W. Smith, D. Staszak, S. P. Swordy, G. Tešić, M. Theiling, S. Thibadeau, K. Tsurusaki, A. Varlotta, V. V. Vassiliev, S. Vincent, M. Vivier, S. P. Wakely, J. E. Ward, T. C. Weekes, A. Weinstein, T. Weisgarber, D. A. Williams, M. Wood

Physics

We present the results of 16 Swift-triggered Gamma-ray burst (GRB) follow-up observations taken with the Very Energetic Radiation Imaging Telescope Array System (VERITAS) telescope array from 2007 January to 2009 June. The median energy threshold and response time of these observations were 260 GeV and 320 s, respectively. Observations had an average duration of 90 minutes. Each burst is analyzed independently in two modes: over the whole duration of the observations and again over a shorter timescale determined by the maximum VERITAS sensitivity to a burst with a t^−1.5 time profile. This temporal model is characteristic of GRB …

The Lick Agn Monitoring Project 2011: Reverberation Mapping Of Markarian 50, Aaron J. Barth, Anna Pancoast, Shawn J. Thorman, Vardha N. Bennert, David J. Sand, Weidong Li, Gabriela Canalizo, Alexei V. Filippenko, Elinor L. Gates, Jenny E. Greene, Matthew A. Malkan, Daniel Stern, Tommaso Treu, Jong-Hak Woo, Roberto J. Assef, Hyun-Jin Bae, Brendon J. Brewer, Tabitha Buehler, S. Bradley Cenko, Kelsey I. Clubb, Michael C. Cooper, Aleksandar M. Diamond-Stanic, Kyle D. Hiner, Sebastian F. Hönig, Michael D. Joner, Michael T. Kandrashoff, C. David Laney, Mariana S. Lazarova, A. M. Nierenberg, Dawoo Park, Jeffrey M. Silverman, Donghoon Son, Alessandro Sonnenfeld, Erik J. Tollerud, Jonelle L. Walsh, Richard Walters, Robert L. Da Silva, Michele Fumagalli, Michael D. Gregg, Chelsea E. Harris, Eric Y. Hsiao, Jeffrey Lee, Liliana Lopez, Jacob Rex, Nao Suzuki, Jonathan R. Trump, David Tytler, Gábor Worseck, Hassan M. Yesuf

Physics

The Lick AGN Monitoring Project 2011 observing campaign was carried out over the course of 11 weeks in spring 2011. Here we present the first results from this program, a measurement of the broad-line reverberation lag in the Seyfert 1 galaxy Mrk 50. Combining our data with supplemental observations obtained prior to the start of the main observing campaign, our data set covers a total duration of 4.5 months. During this time, Mrk 50 was highly variable, exhibiting a maximum variability amplitude of a factor of ~4 in the U-band continuum and a factor of ~2 in the Hβ …

Synthesis Of An Antimicrobial Textile Coating, William M. Morris

Chemistry and Biochemistry

A titania nanosol was synthesized and coated onto nylon/cotton blended textile substrates. The substrates were characterized via SEM for adhesion and nanoparticle formation, then subjected to antimicrobial efficacy tests. The titania nanosol was successfully coated on to textiles samples. Particles were observed to be around 2 by 3 micrometers and formed between the interstitial space of textile fibers. Although larger than typical nanoparticles, the coatings exhibited what seemed to be antimicrobial activity. Titania nanosol coated textile samples were subjected to Kirby Bauer Assay in the presence of S. aureus. The coated textile sample exhibited an inhibition of growth around its …

An Analysis Of Breast Cancer Metastasis, Jennifer Lee Gildner

Statistics

The main objective of this paper is to evaluate possible socio-economic status, clinical, and treatment associations with the occurrence of distant metastasis in Stage I – III breast cancer patients. After analysis in a logistic regression model, four variables were found to be significant with occurrence of distant metastases. These variables were: education, disease group (Triple-negative, Her2Neu-positive and Luminal A), stage at diagnosis, and concordance to chemotherapy based on the NCCN guidelines. Patients without a college degree were found to be more likely to develop distant metastasis than those with a college degree (OR = 2.46 95% CI 1.44 – …

The Relation Between Black Hole Mass And Host Spheroid Stellar Mass Out To Z~2, Vardha N. Bennert, Matthew A. Auger, Tommaso Treu, Jong-Hak Woo, Matthew A. Malkan

Physics

We combine Hubble Space Telescope images from the Great Observatories Origins Deep Survey with archival Very Large Telescope and Keck spectra of a sample of 11 X-ray-selected broad-line active galactic nuclei in the redshift range 1 < z < 2 to study the black-hole-mass-stellar-mass relation out to a look-back time of 10 Gyr. Stellar masses of the spheroidal component (M _sph, ) are derived from multi-filter surface photometry. Black hole masses (M _BH) are estimated from the width of the broad Mg II emission line and the 3000 Å nuclear luminosity. Comparing with a uniformly measured local sample and taking into account selection effects, we find evolution in the form M _BH/M _sph, (1 + z)^{1.96 …}

Morphological Features Of Elongated-Anisotropic Magnetosome Crystals In Magnetotactic Bacteria Of The Nitrospirae Phylum And The Deltaproteobacteria Class, Christopher T. Lefèvre, Mihály Pósfai, Fernanda Abreu, Ulysses Lins, Richard B. Frankel, Dennis A. Bazlinski

Physics

High resolution transmission electron microscopy was used to study the crystallographic habits of the elongated magnetite crystals, variously described as bullet-, tooth- or arrowhead-shaped, in two recently described, uncultured, magnetotactic bacteria belonging to the Nitrospirae phylum designated Candidatus Magnetoovum mohavensis strain LO-1, and Candidatus Thermomagnetovibrio paiutensis strain HSMV-1; and a cultured sulfate-reducing magnetotactic bacterium of the Deltaproteobacteria class of the Proteobacteria phylum designated strain AV-1. The elongation axes of the magnetosomes do not coincide with the easy magnetization axis (which is [111]) but they are parallel to [100] in LO-1 and AV-1 and parallel to [110] in HSMV-1. In all …

Simulated Effects Of Varied Landscape-Scale Fuel Treatments On Carbon Dynamics And Fire Behavior In The Klamath Mountains Of California, Kevin J. Osborne

Master's Theses

I utilized forest growth model (FVS-FFE) and fire simulation software (FlamMap, Randig), integrated through GIS software (ArcMap9.3), to quantify the impacts varied landscape-scale fuel treatments have on short-term onsite carbon loss, long-term onsite carbon storage, burn probability, conditional flame length, and mean fire size. Thirteen fuel treatment scenarios were simulated on a 42,000 hectare landscape in northern California: one untreated, three proposed by the US Forest Service, and nine that were spatially-optimized and developed with the Treatment Optimization Model in FlamMap. The nine scenarios developed in FlamMap varied by treatment intensity (10%, 20%, and 30% of the landscape treated) and …

Achieving Laser Wavelength Stability For Use In Neutral Atom Quantum Computing, Jennifer H. Rushing

Physics

Quantum computing may still be decades away from realization but the pieces necessary for the construction of the first quantum chip are beginning to come together. One piece still eluding researchers is the ability to address individual atoms within a scalable quantum chip structure. The resolution to this issue may be found in any one of several promising implementations, including the use of neutral atoms trapped in 2D optical lattices. One method of constructing such lattices, which has been shown to be computationally viable, employs the diffraction pattern just behind a circular aperture. Laser wavelength stability plays a crucial role …