Physical Sciences and Mathematics Commons^™

Mountaintop Neutrino Detection: A Nu(Tau) Concept, Caroline E. Paciaroni

Physics

High-energy neutrinos traveling from the distant universe produce detectable signals at radio frequencies after interacting with the earth or its atmosphere. This is the principle behind a new experiment, the BEamforming Elevated Array for COsmogenic Neutrinos, or BEACON. BEACON will be a high altitude array of antennas that is sensitive to up-going tau neutrinos ($\nu_{\tau}$). These elementary particles serve as sources of information about the extraordinarily high energy events in the universe that create them, and also the laws of particle physics that govern their behavior. This report details the construction of a transient detector used to characterize site locations …

Studying The Potential Of The [Oii] Emission Line As A Surrogate For Stellar Velocity Dispersion In Active Galactic Nuclei, Edward F. Donohue

Physics

We study the emission profiles of 80 active galaxies to find a surrogate for stellar velocity dispersion. We focus on the width of the emission line of once ionized oxygen, [OII], and compare our results to previous work that used [OIII]. In previous research, [OIII] was found to be a good candidate for a surrogate for stellar velocity dispersion, but analysis of the line was complicated by the presence of wings caused by gas infall and outflow in the region. Emission lines with lower ionization levels, like [OII], are known to have less artificial line-broadening from wings. The study of …

Assessment Of Surface Wind Datasets For Estimating Offshore Wind Energy Along The Central California Coast, Yi-Hui Wang, Ryan K. Walter, Crow White, Hayley Farr, Benjamin I. Ruttenberg

Physics

In the United States, Central California has gained significant interest in offshore wind energy due to its strong winds and proximity to existing grid connections. This study provides a comprehensive evaluation of near-surface wind datasets in this region, including satellite-based observations (QuikSCAT, ASCAT, and CCMP V2.0), reanalysis (NARR and MERRA), and regional atmospheric models (WRF and WIND Toolkit). This work highlights spatiotemporal variations in the performance of the respective datasets in relation to in-situ buoy measurements using error metrics over both seasonal and diurnal time scales. The two scatterometers(QuikSCAT and ASCAT) showed the best overall performance, albeit with significantly …

Adapting Cell-Free Protein Synthesis As A Platform Technology For Education, Grace W. Chu, Max Z. Levine, Nicole E. Gregorio, Javin P. Oza

STAR Program Research Presentations

Cell-free protein synthesis (CFPS) has emerged as an enabling biotechnology for research and biomanufacturing as it allows for the production of protein without the need for a living cell. Applications of CFPS include the construction of libraries for functional genomics and structural biology, the production of personalized medicine, and the expression of virus-like particles. The absence of a cell wall provides an open platform for direct manipulation of the reaction conditions and biological machinery. This project focuses on adapting the CFPS biotechnology to the classroom, making a hands-on bioengineering approach to learning protein synthesis accessible to students grades K-16 through …

The Lick Agn Monitoring Project 2011: Dynamical Modeling Of The Broad-Line Region, Peter R. Williams, Anna Pancoast, Tommaso Treu, Brendon J. Brewer, Vardha N. Bennert, Jong-Hak Woo

Physics

We present models of the Hβ-emitting broad-line region (BLR) in seven Seyfert 1 galaxies from the Lick AGN Monitoring Project 2011 sample, drawing inferences on the BLR structure and dynamics as well as the mass of the central supermassive black hole. We find that the BLR is generally a thick disk, viewed close to face-on, with preferential emission back toward the ionizing source. The dynamics in our sample range from near-circular elliptical orbits to inflowing or outflowing trajectories. We measure black hole masses of for PG 1310−108, for Mrk 50, for Mrk 141, for Mrk 279, for Mrk …

Reversible Motion In A Contact Line, Audrey Profeta, Esmeralda Orozco, Juan A. Ortiz Salazar, Dani Medina, Nathan C. Keim

STAR Program Research Presentations

When a body of liquid sits on a surface, an irregular border between the wet and dry regions of the surface exists, called the contact line. Driving this contact line back and forth repeatedly can change its shape.We use a syringe pump to cyclically infuse and withdraw a predetermined volume of water, and take photos of the contact line after each cycle. Comparing these images to each other determines if the contact line is returning to the same shape. We find that below a critical value of infused volume, after many cycles the contact line reaches a steady state in …

Light Curves In X-Rays And Gamma-Rays, Daniel H. Sellers

STAR Program Research Presentations

Gamma-ray Bursts are the most luminous and energetic events in the universe. Understanding the intrinsic properties of GRBs allows for their use as standard candles (objects of known distance and luminosity) and for the study of extremely distant regions of space.

In this study we use the piecewise Willingale model to fit the X-ray flux vs. time curves (light curves) of 235 GRBs with detectable 'plateau' phase and known redshift using data from the swift repository. This sample is analyzed for consistency with a relation between the temporal decay and spectral indexes predicted by the Fireball model of GRB Emission. …

Hydrodynamics In A Shallow Seasonally Low-Inflow Estuary Following Eelgrass Collapse, Ryan K. Walter, Edwin J. Rainville, Jennifer K. O'Leary

Physics

Hydrodynamics play a critical role in mediating biological and ecological processes and can have major impacts on the distribution of habitat-forming species. Low-inflow estuaries are widespread in arid regions and during the dry season in Mediterranean climates. There is a growing need to evaluate dynamics and exchange processes in these systems and the resultant ecological linkages. We investigate the role that hydrodynamics play in shaping environmental gradients in a short and seasonally low-inflow estuary located along the central California coast. Since 2007, eelgrass meadows in Morro Bay have declined by more than 90%, representing the collapse of the major …

Scale-Invariant Geometric Data Analysis (Sigda), Marina Girgis, Max Robinson

STAR Program Research Presentations

The purpose of this research is to introduce a new data analysis method called Scale Invariant Geometric Data Analysis (SIGDA). SIGDA has been shown to be more informative than more common data analysis methods, such as Principal Component Analysis (PCA). SIGDA is used to visualize complex data sets in a way that accurately preserves data patterns and behavior. SIGDA is designed to preserve relative ratios in a numerical matrix, and the number of entries has to be more than the total number of rows and columns. Our research involved providing a simple explanation of SIGDA's mathematical process—simple enough for the …

Visualization Of Geospatial Data As An Analytical And Educational Tool, Richard A. Vu

STAR Program Research Presentations

World Wind is an open-source API developed for Java, Android, and browsers that is designed to visualize and interact with geospatial data. The Web World Wind client is composed of four major components: the HTML template, the globe, geospatial features, and application features. The template was implemented using Bootstrap and hosts the globe provided by World Wind. This globe draws its data from multiple imagery sources, including the Open Geospatial Consortium (OGC) Web Map Service and Web Map Tile Service. This enables the application to perform and visualize complex calculations with multiple types of data such as weather and terrain. …

Tof-Sims Analysis Of Plant Seed Interactions With Plant Growth-Promoting Bacteria, Tammy Pheuphong, Rachel Komorek, Xiao-Ying Yu

STAR Program Research Presentations

The use of time-of-flight secondary ion mass spectrometry (ToF-SIMS) in plant biology is a relatively unexplored and quickly developing field. The majority of research in plant SIMS involves the application of ToF-SIMS to study dried wood tissues, and only a handful of studies apply SIMS on plant stems, roots, and/or seeds. Our project provides a brief description and review of previous work using SIMS on plant stems, roots, and/or seeds, along with an emphasis on the sample preparation in each study. Additionally, the use of Brachypodium distachyon (Brachypodium) as a model system for research on grasses has also become more …

Applications Of Diels-Alder Chemistry In Polymer Synthesis, Joshua C. Stambaugh, Philip J. Costanzo, Sierra E. Gosting

STAR Program Research Presentations

Diels-Alder chemistry is utilized for a myriad of commercial applications during polymer synthesis, ranging from self-healing materials to heat responsive materials to emulsion coatings. In particular, the ability to regulate and control the amount and type of functional group linkages is key component for polymer applications. A common strategy that is employed is the use of phenolic maleimide as a dienophile during Diels-Alder synthesis to control the linkages on a polymer, which determines its properties and functionality. This summer was the beginning of a project to prepare a commercial scale, water-based emulsion floor coating/polish. The first step in this project …

Anisotropic Conductive Adhesives For Interdigitated Back Contact (Ibc) Silicon Solar Cells, Katherine M. Lohmuste, Manuel Schnabel, Maikel F.A.M. Van Hest

STAR Program Research Presentations

The current manufacturing process for solar panels using interdigitated back contact (IBC) silicon solar cells involves a multi-step metallization and interconnection process in which a substantial amount of silver is used. This work focuses on a new process using conductive adhesives (CA) which would increase efficiency and lower cost through a one-step metallization and interconnection process that combines with encapsulation using little silver and only requiring metal patterning on the back sheet or back glass. It would also not require direct metallization of the silicon, which would result in fewer defects, while increasing voltage and therefore efficiency. Silver-coated Poly(Methyl Methacrylate) …

Looking Toward The Future: The Value Of Geothermal Energy In The United States Power Market, Reilly R. Moran

STAR Program Research Presentations

States are creating renewable portfolio standards (RPSs) that require utilities to run off a certain percentage of renewables. With the new RPSs and current emission standards the dynamic of the grids energy and reliability needs are changing. Because RPSs and emission standards, utilities are procuring the cheapest renewable resources, which tend to be solar and wind. As RPSs increase over time this causes higher procurements of solar and wind. Higher procurement and increasing penetration levels of solar and wind is causing their energy values to decrease as well as some reliability concerns. While geothermal energy value will continue to stay …

Pnnl Dark Matter Bubble Chamber, Ryan Robinson

STAR Program Research Presentations

The Pacific Northwest National Laboratory (PNNL) prototype bubble chamber is intended to address issues encountered with the current PICO dark matter search detectors and improve the functionality of future experimental designs. The PNNL bubble chamber accomplishes this with a simplified interface between the hydraulic pressure controls and the target vessel and altering the standard chamber design such that it can be easily exchanged and replaced with vessels of various sizes and materials for testing purposes. The chamber itself is a glass vessel which houses perfluorobutane and holds the target fluid above room temperature and atmospheric pressure. The target fluid becomes …

Can We Detect Undeclared Facilities In The Nuclear Fuel Cycle Using Mathematical Simulations?, Kassandra Guajardo, Lee Burke, Romarie Morales Rosado

STAR Program Research Presentations

What if there was a way to detect undeclared (Clandestine) facilities using data sets from a nuclear facility? The Statistical Modeling and Experimental Design group at the Pacific Northwest National Laboratory are developing the Modeling and Inference for Remote Sensing (MIRS) model. The model uses two deterrence scenarios within the nuclear fuel cycle to detect undeclared facilities. The two scenarios are used in an agent based nuclear fuel cycle simulator to produce the declared and undeclared feed, tails assay, and sink inventory in kilograms of Uranium. In the first scenario, natural uranium is being diverted from the conversion plant to …

Breakpoint Analysis Of Modis Vegetarian Cover Change In Southern California Deserts, Rebecca Baiman

STAR Program Research Presentations

This study applies time series breakpoint analysis to look at Moderate Resolution Imaging Spectroradiometer (MODIS) data of southern California. Past studies have looked at this desert land using Landsat data in order to analyze any changes the environment has gone through due to renewable energy development or other factors. This study develops a method for utilizing structural change models to study the DRECP land area. Focusing on breakpoints, this study found that most positive breakpoints represented years with high rainfall. Additionally, sandy washes with little vegetation did not yield any breakpoint between 2000 and 2018. This study can be used …

Quantifying The Environmental Performance Of A Stream Habitat Improvement Project, Cody Morse

Master's Theses

River restoration projects are being installed worldwide to rehabilitate degraded river habitat. Many of these projects focus on stream habitat improvement (SHI), and an estimated 60%of the 37,000 projects listed in the National River Restoration Science Synthesis Program focus on SHI for salmon and trout species. These projects frequently lack a sufficient monitoring program or account for the environmental costs associated with SHI. The present study used life cycle assessment (LCA) techniques and topographic effectiveness monitoring to quantify environmental costs on the basis of geomorphic change. This methodology was a novel approach to assessing the cost-benefit relationship of SHI. To …

Extension Of Cpe 454 Operating System, Joseph Nathaniel Arhar

Computer Science and Software Engineering

This project extended on the operating system I wrote in CPE 454 by adding additional features on top of the existing implementation. In order to implement them, I researched operating system design patterns and hardware details. I used wiki.osdev.org for most research, just like I did in CPE 454. The source code for the project is at https://github.com/josepharhar/jos.

Finding Spanning Trees In Strongly Connected Graphs With Per-Vertex Degree Constraints, Samuel Benjamin Chase

Computer Science and Software Engineering

In this project, I sought to develop and prove new algorithms to create spanning trees on general graphs with per-vertex degree constraints. This means that each vertex in the graph would have some additional value, a degree constraint d. For a spanning tree to be correct, every vertex v_i in the spanning tree must have a degree exactly equal to a degree constraint d_i. This poses an additional constraint on what would otherwise be a trivial spanning tree problem. In this paper, two proofs related to my studies will be discussed and analyzed, leading to my algorithm …

Tectonic Controls On Alluvial Fan Dissection In The El Paso Mountains, Michael Thomas Gaffney

Natural Resources Management and Environmental Sciences

The localized dissection of alluvial fans along the western El Paso Mountains is under question. A relatively minor, south dipping normal fault, previously unmentioned in scientific literature, cuts across Quaternary terraces and alluvial fans in the piedmont of the El Paso Mountains. The linear trend of footwall uplift and the pattern of stream incision into the footwall adjacent to the linear trend of footwall uplift reveal that fan dissection is a result of base level fall caused by ongoing tectonism along the El Paso fault system. The regional importance is discussed as the timing of faulting reveals relatively recent uplift …

Column Tests Of Nitrate Breakthrough Behavior In Subsurface Sediments To Understand Transport In The Root-Zone, Rebecca Sally Haworth, Emma Rose Goodwin

Natural Resources Management and Environmental Sciences

Nitrate has become an increasingly ubiquitous pollutant in surface and groundwater, posing a threat to hu- man health and ecosystems. Nitrogen is a necessary nutrient for plant growth and is limiting in many soils. As a result, farmers often add nitrogen to soil in a usable form such as nitrate, nitrite, or ammonia through the addition of fertilizer.

Extractive Text Summarization With Deep Learning, Garrett G. Chan

Computer Engineering

This project explores extractive text summarization using the capabilities of Deep Learning. The goal of this project is to create an application with a neural network to take in text as its input, and create a summary that is a shorter, condensed version of the input text. This has been implemented in Python by configuring and training a neural network that takes in a vector of features that are extracted from the text using various Natural Language Processing libraries. The implementation demonstrates that we can train simple deep neural networks to successfully summarize text.

The Effect Of Endgame Tablebases On Modern Chess Engines, Christopher D. Peterson

Computer Engineering

Modern chess engines have the ability to augment their evaluation by using massive tables containing billions of positions and their memorized solutions. This report examines the importance of these tables to better understand the circumstances under which they should be used. The analysis conducted in this paper empirically examines differences in size and speed of memorized positions and their impacts on engine strength. Using this technique, situations where memorized tables improve play (and situations where they do not) are discovered.

Raymarching The Mandelbulb Fractal In Vr, Timotheus Alexander Letz

Computer Engineering

Elaborate 3D fractals, such as the mandelbulb, offer fascinating depths and structures that bear self-similarity as one zooms in closer and closer. Traditional rendering techniques focus on pre-rendering the fractal, to bypass the need for real-time display. To display and explore the mandelbulb in VR, this real-time display is needed, and can be provided through the use of “Raymarching”, a technique that allows for the rendering of scenes within the GPU. This paper explores various techniques and systems used to provide, augment, and accelerate this process.

Calibration And Limitations Of The Mg Ii Line-Based Black Hole Masses, Jong-Hak Woo, Huynh Anh N. Le, Marios Karouzos, Dawoo Park, Daesong Park, Matthew A. Malkan, Tommaso Treu, Vardha Nicola Bennert

Physics

We present single-epoch black hole mass () calibrations based on the rest-frame ultraviolet (UV) and optical measurements of Mg ii 2798 Å and Hβ 4861 Å lines and the active galactic nucleus (AGN) continuum, using a sample of 52 moderate-luminosity AGNs at z ~ 0.4 and z ~ 0.6 with high-quality Keck spectra. We combine this sample with a large number of luminous AGNs from the Sloan Digital Sky Survey to increase the dynamic range for a better comparison of UV and optical velocity and luminosity measurements. With respect to the reference based on the line dispersion of H …

Hydrologic Response To Conifer Removal And Upslope Harvest In An Encroached Montane Meadow, Noël C. Fie

Master's Theses

Meadows are crucial components to larger river watersheds because of their unique hydrologic and ecological functions. Due to climate change, over grazing, and fire suppression, conifer encroachment into meadows has accelerated. In some western regions, nearly half of all meadow habitat has been loss due to conifer encroachment. Restoration of these hydrologic systems requires tree removal. Many studies exist that address the issue of conifer encroachment in montane meadows, however, few studies focus on the role that conifer removal plays on the encroaching meadow. Furthermore, few studies exist that document the hydrologic change from conifer removal and further restoration steps, …

Deaddrop: Message Passing Without Metadata Leakage, Davis Mike Arndt

Computer Science and Software Engineering

Even when network data is encrypted, observers can make inferences about content based on collected metadata. DeadDrop is an exploratory API designed to protect the metadata of a conversation from both outside observers and the facilitating server. To do so, DeadDrop servers are passed no recipient address, instead relying upon the recipient to check for messages of their own volition. In addition, the recipient downloads a copy of every encrypted message on the server to prevent even the server from knowing to whom each message is intended. To these purposes, DeadDrop is mostly successful. However, it does not obscure all …

Heavy Flavour In Jets And Azimuthal Correlations, Patrick J. Steffanic

Physics

We studied heavy-flavor azimuthal correlations using the semi-leptonic decay channel of hard-scattered bottom quarks in proton-proton collisions at center-of-mass energies of 7 TeV. We used a mixed-event method to produce a corrected correlation that hinted at back-to-back pair production. We further studied the jets resulting from these heavy-flavor hard scatterings, and jets resulting from light-flavor and gluon scattering. We compared several kinematic variables from each of the jet populations, concluding that novel kinematic variables must be developed in order to effectively separate the jet populations.

Influencing Exploration In Actor-Critic Reinforcement Learning Algorithms, Andrew R. Gough

Master's Theses

Reinforcement Learning (RL) is a subset of machine learning primarily concerned with goal-directed learning and optimal decision making. RL agents learn based on a reward signal discovered from trial and error in complex, uncertain environments with the goal of maximizing positive reward signals. RL approaches need to scale up as they are applied to more complex environments with extremely large state spaces. Inefficient exploration methods cannot sufficiently explore complex environments in a reasonable amount of time, and optimal policies will be unrealized resulting in RL agents failing to solve an environment.

This thesis proposes a novel variant of the Actor-Advantage …