Physical Sciences and Mathematics Commons^™

Deep Learning For Digitized Histology Image Analysis, Sudhir Sornapudi

Doctoral Dissertations

“Cervical cancer is the fourth most frequent cancer that affects women worldwide. Assessment of cervical intraepithelial neoplasia (CIN) through histopathology remains as the standard for absolute determination of cancer. The examination of tissue samples under a microscope requires considerable time and effort from expert pathologists. There is a need to design an automated tool to assist pathologists for digitized histology slide analysis. Pre-cervical cancer is generally determined by examining the CIN which is the growth of atypical cells from the basement membrane (bottom) to the top of the epithelium. It has four grades, including: Normal, CIN1, CIN2, and CIN3. In …

Symmetry-Breaking In The Multi-Photon Ionization Dynamics Of Oriented Atoms, Aruma Handi Nishshanka Chandrajith De Silva

Doctoral Dissertations

“Laser cooling and trapping, femtosecond light creation, and coincident electron and ion momentum imaging was combined in a world-wide unique experimental setup. These state-of-the-art techniques were used to control atomic systems and analyze the few-body quantum dynamics in multi-photon ionization of lithium. An all-optical, near-resonant laser atom trap (AOT) was developed to prepare a lithium gas at milli-Kelvin temperatures. The atoms can be resonantly excited to the state 2² P_3/2(ml = +1) with a high degree of polarization and are used as a target to study atomic multi-photon ionization in the field of an intense laser source …

Secure Blockchains For Cyber-Physical Systems, Matthew Edward Wagner

Doctoral Dissertations

“Blockchains are a data structure used to perform state agreement in a distributed system across an entire network. One unique trait of blockchains is the lack of a centralized trusted third-party to control the system. This prevents a corrupted trusted third party from being able to control the entire blockchain. All nodes can reach agreement in an untrusted network where nodes do not need to trust one another to believe the accuracy of the information stored. Two main issues occur when trying to apply this technology to other applications: verifiability and scalability. In previous blockchain architectures, there is no way …

Development Of A Modeling Algorithm To Predict Lean Implementation Success, Richard Charles Barclay

Doctoral Dissertations

”Lean has become a common term and goal in organizations throughout the world. The approach of eliminating waste and continuous improvement may seem simple on the surface but can be more complex when it comes to implementation. Some firms implement lean with great success, getting complete organizational buy-in and realizing the efficiencies foundational to lean. Other organizations struggle to implement lean. Never able to get the buy-in or traction needed to really institute the sort of cultural change that is often needed to implement change. It would be beneficial to have a tool that organizations could use to assess their …

Fuzzy Logistic Regression For Detecting Differential Dna Methylation Regions, Tarek M. Bubaker Bennaser

Doctoral Dissertations

“Epigenetics is the study of changes in gene activity or function that are not related to a change in the DNA sequence. DNA methylation is one of the main types of epigenetic modifications, that occur when a methyl chemical group attaches to a cytosine on the DNA sequence. Although the sequence does not change, the addition of a methyl group can change the way genes are expressed and produce different phenotypes. DNA methylation is involved in many biological processes and has important implications in the fields of biomedicine and agriculture.

Statistical methods have been developed to compare DNA methylation at …

Studying The Effects Of Various Process Parameters On Early Age Hydration Of Single- And Multi-Phase Cementitious Systems, Rachel Cook

Doctoral Dissertations

”The hydration of multi-phase ordinary Portland cement (OPC) and its pure phase derivatives, such as tricalcium silicate (C₃S) and belite (ß-C₂S), are studied in the context varying process parameters -- for instance, variable water content, water activity, superplasticizer structure and dose, and mineral additive type and particle size. These parameters are studied by means of physical experiments and numerical/computational techniques, such as: thermodynamic estimations; numerical kinetic-based modelling; and artificial intelligence techniques like machine learning (ML) models. In the past decade, numerical kinetic modeling has greatly improved in terms of fitting experimental, isothermal calorimetry to kinetic-based modelling …

A Molecular Dynamics Study Of Temperature Dependent Wetting In Alkane-Water Systems, Pauf Neupane

Doctoral Dissertations

“The wetting behavior of aqueous organic systems is of great importance in several environmental and industrial processes such as the formation and growth of atmospheric aerosols, crude oil recovery from an oil field, onsite cleaning of natural gas, and clean-up of oil spills. In this work, we employed molecular dynamics (MD) simulations to explore the temperature dependent wetting behavior of octane and nonane on water in planar interfaces as well as in nanodroplets using PYS alkane and SPC/E and TIP4P/2005 water models.

For planar interfaces, we found unusual wetting behavior of octane and nonane on SPC/E water, but generally not …

Seismic Behavior Of Composite Bridge Columns, Mohanad M. Abdulazeez

Doctoral Dissertations

“This study investigates experimentally and numerically the seismic behavior of large-scale hollow-core fiber-reinforced polymer-concrete-steel (HC-FCS) innovative bridge columns as a sustainable approach to endure and rapidly recover from natural disasters such as earthquakes. The HC-FCS column consisted of a concrete shell sandwiched between an outer fiber-reinforced polymer (GFRP) tube and an inner steel tube to provided continuous confinement for the concrete shell along with the height of the column. The columns have a slender inner steel tube with diameter-to-thickness (D_s/t_s) ratios ranged between 85 to 254. Each steel tube was embedded into the footing, while the …

Effect Of Subsurface Microseismicity On The Motion Of Surrounding Dispersed Droplets -- Data, Chao Zeng, Wen Deng

Effect of Subsurface Microseismicity on the Motion of Surrounding Dispersed Droplets – Data

Spreadsheet - Data plotted in Figure 4 and Figure 5

Supporting information

Decoupled Finite Element Methods For General Steady Two-Dimensional Boussinesq Equations, Lioba Boveleth

Masters Theses

"This work presents two kinds of decoupled finite element methods for the steady natural convection problem in two dimensions. Firstly, the standard Galerkin finite element method is derived in detail stating algorithms needed for the realization in MATLAB. A numerical example verifies the error convergence. Secondly, using iteration, the Boussinesq equations are decoupled into the Navier-Stokes equations and a parabolic problem. The resulting problems are solved either in parallel or sequentially. Finally, the same numerical example as before is used to confirm the convergence and analyze the methods in terms of iteration performance. In addition to a higher flexibility and …

Aquatic Plants And Their Application To Successful Floating Treatment Wetlands, Katherine May Mazanec

Masters Theses

“This research aims to mitigate eutrophication of freshwater habitats affected by urban stormwater runoff. Two highly impacted urban ponds near the Missouri S&T campus in Rolla were the focus of this research on the application of floating treatment wetlands (FTWs). An FTW consists of a man-made floating mat that is planted with emergent or floating macrophytes. The plants grow on the mat and their roots extend into the water column below the mat. Plant tissues, especially roots in direct contact with the water, take up nutrients, act as biofilm growth sites, and may facilitate precipitation of nutrients. With urbanization, ponds …

Evaluation Of The Symbiotic Relation Between Endophyte And Poplar Trees Exposed To Landfill Leachate, Catalina Vega Hurtado

Masters Theses

“The contamination of soil and groundwater from leachate leakage from landfill has turned, nowadays, into a global public issue. One of the main concerns about this pollutant is the potential threat to human and ecosystem health. The current research studied endophyte bacteria in association with poplar trees (Populus sp.), as a method of bioremediation of landfill leachates. The objective of the project was to identify treatment strategies that may improve plant performance (survival rates, plant fitness, and degradation efficacy) with the purpose of being implemented in phytoremediation plots, aimed to intercept and treat landfill leachate, before the contamination of watershed. …

Nanodiamonds And Carbon Nano-Onions Ceramic Composites And Their Applications, Ibrahim Munkaila Abdullahi

Masters Theses

"Luminescent nanodiamonds are photostable non-blinking fluorescent biocompatible, non-toxic, functional Zable materials made from high-pressure high temperature (HPHT) microcrystalline diamonds. For long, the scientific community has been investigating for a clean, efficient and cost-effective technique to reduce the size of fluorescent microcrystalline diamond into nanodiamonds. Their color center, responsible for the fluorescent properties are crucial for their applications, including biomedical imaging, nano sensing, quantum computing etc, and therefore should not be affected significantly by the method of size reduction applied. A novel size reduction technique that is based on explosive fragmentation was developed and the corresponding fragmented diamonds obtained were characterized …

Attack Detection And Mitigation In Mobile Robot Formations, Arnold Fernandes

Masters Theses

"A formation of cheap and agile robots can be deployed for space, mining, patrolling, search and rescue applications due to reduced system and mission cost, redundancy, improved system accuracy, reconfigurability, and structural flexibility. However, the performance of the formation can be altered by an adversary. Therefore, this thesis investigates the effect of adversarial inputs or attacks on a nonholonomic leader-follower-based robot formation and introduces novel detection and mitigation schemes.

First, an observer is designed for each robot in the formation in order to estimate its state vector and to compute the control law. Based on the healthy operation of the …

Strain Partitioning Across The Polochic-Motagua Fault System In Guatemala: Insight From Kinematic Modeling, Qiaoqi Sun

Masters Theses

”The Polochic-Motagua Fault System in Guatemala is the on-land segment of the sinistral transform plate boundary between the North American Plate and the Caribbean Plate. Three major seismically active strike-slip faults in this fault system pose significant earthquake threats to surrounding populated cities. The assessment of seismic hazard requires a better understanding of the kinematics of the fault system. GPS monitoring indicates that seventy-five percent of the ~20 mm/yr. plate motion is accommodated by the Motagua Fault and less than twenty-five percent is accommodated by the Polochic Fault. However, the Polochic Fault documents a lateral offset of ~132 ± 5 …

Mineral Compositions Of Meteorite Samples Alha 77005, Nwa 7397, Nwa 5480, And Ausson: Implications For Geodynamic Processes On Their Parent Bodies And Meteorite Reclassification, Kaylin Agnata Tunnell

Masters Theses

“This study investigates the major, minor, and trace element compositions of minerals from a series of meteorites which represent different stages of planetary evolution including two sample from Mars (ALHA 77005 and NWA 7397), one sample from Vesta (NWA 5480), and one ordinary chondrite (Ausson). The goal of this study is to investigate if petrogenetic tracers commonly employed to understand terrestrial samples can also be applied to extraterrestrial samples. The data presented here show that mineral trace element data allow for novel insight into the magmatic history of meteorite samples. For example, V/Sc and Fe/Mn ratios in olivine provide insight …

Magnetic Control Of Transport Of Particles And Droplets In Low Reynolds Number Shear Flows, Jie Zhang

Doctoral Dissertations

“Magnetic particles and droplets have been used in a wide range applications including biomedicine, biological analysis and chemical reaction. The manipulation of magnetic microparticles or microdroplets in microscale fluid environments is one of the most critical processes in the systems and platforms based on microfluidic technology. The conventional methods are based on magnetic forces to manipulate magnetic particles or droplets in a viscous fluid.

In contrast to conventional magnetic separation method, several recent experimental and theoretical studies have demonstrated a different way to manipulate magnetic non-spherical particles by using a uniform magnetic field in the microchannel. However, the fundamental mechanism …

Minimizing The Detrimental Effects Of Hydro-Peaking On Riverbank Instability: The Lower Osage River Case, Wesam Sameer Mohammed-Ali

Doctoral Dissertations

"The fluctuation of water level downstream from dams due to hydropower flow releases negatively affects the riverbank stability. Therefore, this research aims to examine the feasibility of using an optimization technique to mitigate the riverbank instability resulting from the outflow variation of hydropower plants. The effects of the water releases from the Bagnell Dam were investigated by computing a series of safety factors for 78 cross sections along the 81-mile stretch of the lower Osage River in relation to outflow events by using the integrated BSTEM model incorporated into the HEC-RAS model. The 1-D sediment transport and unsteady flow in …

Stabilization Dynamics Of The Ozone Molecular System, Sangeeta Sur

Doctoral Dissertations

"The observation of larger-than-expected concentrations of heavier isotopologues of ozone known as 'ozone isotopic anomaly' in the stratosphere is a mass-independent effect (in contrast to most kinetic isotope effects familiar to chemists) that is traced back to the recombination process in the formation of ozone in the Chapman cycle. Understanding the relative efficiencies (often approximated as equal for different isotopologues) of the stabilization step (some of the details of which are still a mystery) which involves energy transfer from a highly excited ozone molecule to a third body, M (argon atom in this case) to form stable ozone is a …

A Broad Iceland Plume Associated With Two Phase Transitions At The 660 Km Discontinuity: Constraints From Receiver Functions, Dan Wang

Doctoral Dissertations

"In spite of the fact that Iceland is frequently regarded as the archetypal example of mantle plumes, the existence, depth extent, origin, dimension and excess temperature of the hypothesized plume remain enigmatic and hotly debated. The controversy mostly originates from the limited vertical resolution of seismic tomography techniques and the associated uncertainty in the depth and lateral extents of the lower wavespeed anomaly. Here we utilize a robust receiver-function-based technique to image the topography of the 410 and 660 km discontinuities bordering the mantle transition zone beneath Iceland and surrounding oceanic regions, and construct thermal and seismic wavespeed models of …

Seismological Investigations Of Lithospheric Structure Beneath The East African Rift System And The Kalahari Craton, Tuo Wang

Doctoral Dissertations

"In spite of numerous geophysical studies have been conducted in East African Rift System and Southern Africa, the structure and evolution of the crust and upper mantle are still controversial. In this study, we applied multiple seismological techniques to investigate the structure in the crust and uppermost mantle beneath the East African Rift System and Kalahari Craton in southern Africa. First, the technique of ambient noise tomography was applied to image shear wave velocity model from surface to the depth of 40 km beneath the Malawi and Luangwa rift zones. For the first time, a high-resolution 3-D shear wave velocity …

An Integrated Wellbore Stability Study To Mitigate Expensive Wellbore Instability Problems While Drilling Into Zubair Shale/Sand Sequence, Southern Iraq, Ahmed Khudhair Abbas

Doctoral Dissertations

”The Zubair Formation is the most prolific reservoir in Iraq, which is comprised of sandstones interbedded with shale sequences. Due to the weak nature of the shale sequence, the instability of a wellbore is one of the most critical challenges that continuously appears during drilling across this formation. Historically, over 90% of wellbore problems in the Zubair Formation were due to wellbore instability. Problems associated with wellbore instability, such as tight hole, shale caving, stuck logging tools along with subsequent fishing, stuck pipe, and sidetracking result in increasing the non-productive time. This non-productive time has cost an enormous amount of …

A Spectroscopic And Photometric Survey Of The W4 Hii Region And Its Young Stellar Population, Matt Wentzel-Long

Doctoral Dissertations

”The W4 HII region is home to a large number of O and B-type stars as well as the young open cluster IC 1805. OB-type produce intense photoionizing radiation and stellar winds that can induce star formation in surrounding molecular clouds and sometimes carve out large regions of decreased particle density called superbubbles. During the star- formation process, young stellar objects (YSOs) are initially surrounded by circumstellar disks made of gas and dust which naturally dissipate after several million years. The dissipation of the disk is thought to occur for a variety of reasons, including photoevaporation by the encompassed protostar …

Development Of Tools For Water Management In The Hatra Watershed (Northwestern Iraq) Using Satellite Technologies, Majid S. Mohamod

Doctoral Dissertations

“All around the world the demand for water is increasing, especially in arid and semi-arid regions, including Iraq which subject to continuous desertification that is worsening, more importantly the Jezira region in northwestern Iraq. Thus, it’s crucial to have a better strategy for water management. One of these strategies is to promote groundwater recharge for restoring the aquifer depletion. The successful groundwater recharge is limited by some potential data such as the annual water budge and precipitation measurements. The atomospheric and hydrological observations are limited by sparse population which tends to be less in arid and semi-arid regions. Therefore, an …

History Of Natural And Anthropogenic Activities In Lake Izabal, Eastern Guatemala: Using Geochemical Evidence To Record Recent Contamination, Elisandra Hernandez

Doctoral Dissertations

”Water is essential for human subsistence. Stable freshwater supplies are needed as a source of food, drinking water, for transportation, recreation and economic development. Despite their recognized importance, anthropogenic activities have altered freshwater ecosystems around the world. Lake Izabal is the habitat for diverse aquatic species of flora and fauna, some of which are endemic and endangered. Its importance notwithstanding, anthropogenic activities developed in Lake Izabal’s catchment in recent years have compromised its status. This study used paleolimnological techniques to link past and recent anthropogenic activities such as mining operations and recent tilapia aquaculture. Relative abundances and concentrations of Pb, …

Predictive Geohazard Mapping Using Lidar And Satellite Imagery In Missouri And Oklahoma, Usa, Olufeyisayo B. Ilesanmi

Doctoral Dissertations

”Light Detection and Ranging (LiDAR) and satellite imagery have become the most utilized remote sensing technologies for compiling inventories of surficial geologic conditions. Point cloud data obtained from multi-spectral remote sensing methods provide a detailed characterization of the surface features, in particular, the detailed surface manifestations of underlying geologic structures. When combined, point clouds eliminate bias from visual inconsistencies and/or statistical values. This research explores the competence of point clouds derived from LiDAR and Unmanned Aerial Systems (UAS) as a predictive tool in evaluating various geohazards. It combines these data sets with other remote sensing techniques to evaluate the sensitivity …

Continuous-Flow Synthesis Of Fine Chemicals And Pharmaceutical Compounds Over Intelligent Organocatalysts With Bifunctional Reactivity, Abdo-Alslam Alwakwak

Doctoral Dissertations

“Many biological systems that utilize organic active sites to catalyze reactions under mild conditions invoke cooperative catalytic pathways, whereby two or more active sites work together to activate the reactant(s). The use of cooperative (bifunctional) catalysts and continuous flow chemistry (a reaction within the narrow channels of a micro‐ or microfluidic reactor) are commonplace in sustainable chemical transformation and attract a great deal of interest with respect to economic and environmentally-sustainable production of fine chemicals, pharmaceuticals, and agrochemicals, water treatment, as well as upgrading of biomass feedstocks. Although, some methods have been developed for immobilization of bifunctional catalysts for cooperative …

Pattern Selection Models: From Normal To Anomalous Diffusion, Hatim K. Khudhair

Doctoral Dissertations

“Pattern formation and selection is an important topic in many physical, chemical, and biological fields. In 1952, Alan Turing showed that a system of chemical substances could produce spatially stable patterns by the interplay of diffusion and reactions. Since then, pattern formations have been widely studied via the reaction-diffusion models. So far, patterns in the single-component system with normal diffusion have been well understood. Motivated by the experimental observations, more recent attention has been focused on the reaction-diffusion systems with anomalous diffusion as well as coupled multi-component systems. The objectives of this dissertation are to study the effects of superdiffusion …

System Efficient Esd Design Concept For Soft Failures, Giorgi Maghlakelidze

Doctoral Dissertations

"This research covers the topic of developing a systematic methodology of studying electrostatic discharge (ESD)-induced soft failures. ESD-induced soft failures (SF) are non-destructive disruptions of the functionality of an electronic system. The soft failure robustness of a USB3 Gen 1 interface is investigated, modeled, and improved. The injection is performed directly using transmission line pulser (TLP) with varying: pulse width, amplitude, polarity. Characterization provides data for failure thresholds and a SPICE circuit model that describes the transient voltage and current at the victim. Using the injected current, the likelihood of a SF is predicted. ESD protection by transient voltage suppressor …

Structurally And Electronically Diverse Polyanion-Based Cathode Materials For Alkali-Ion Batteries, Prashanth Sandineni

Doctoral Dissertations

”Through this investigation polyanion-based cathode materials including sulfates, phosphates, and phosphites of transition metal have been synthesized for lithium and sodium-ion batteries and their electrochemical performances were evaluated. The emphasis was on soft chemical routes to discover metastable phases which are often missed in high temperature synthesis. Iron-based compounds were the main focus of this investigation, however, concurrently a few vanadium-analogues of iron compounds were investigated to evaluate the effect of multi-electron process on achievable voltage and capacity.

This investigation resulted in the discovery of several compounds with unique crystal structures, namely AFe₃(SO₄)₂(OH)_{6 …}