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Articles 4441 - 4470 of 5954

Full-Text Articles in Physical Sciences and Mathematics

Effects Of Human Disturbances On The Behavior Of Wintering Ducks, Melissa L. Pease, Robert K. Rose, Mark J. Butler Jan 2005

Effects Of Human Disturbances On The Behavior Of Wintering Ducks, Melissa L. Pease, Robert K. Rose, Mark J. Butler

Biological Sciences Faculty Publications

Human activity causes wintering waterfowl to expend energy to avoid humans at a time in their annual cycle when energy conservation is important to survival, migration, and breeding reserves. Understanding the effects of recreational activities on waterfowl is important to managing natural resource areas where migratory birds depend on wetland habitat for resting and feeding. We investigated responses of 7 species of dabbling ducks to 5 different experimental human activities, (a pedestrian, a bicyclist, a truck traveling at 2 different speeds, and an electric passenger tram). Responses of ducks depended on type of disturbance, species, and distance from disturbances. Most …

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Feeding Ecology Of Juvenile Spiny Lobster, Panulirus Interruptus, On The Pacific Coast Of Baja California Sur, Mexico, Verónica Castañeda‐Fernández‐De‐Lara, Elisa Serviere‐Zaragoza, Sergio Hernández‐Vázquez, Mark J. Butler Iv Jan 2005

Feeding Ecology Of Juvenile Spiny Lobster, Panulirus Interruptus, On The Pacific Coast Of Baja California Sur, Mexico, Verónica Castañeda‐Fernández‐De‐Lara, Elisa Serviere‐Zaragoza, Sergio Hernández‐Vázquez, Mark J. Butler Iv

Biological Sciences Faculty Publications

Many aspects of the early life history of the red lobster Panulirus interruptus are little known, including the relationship between habitat structure, food resource availability, and nutrition of juveniles. We investigated the spatial and temporal differences in food intake, diet composition, and nutritional condition of juveniles at two sites along the Pacific coast of the Baja California Peninsula (Mexico) with contrasting oceanographic and biological conditions. One site (Arvin) is located inside a protected bay, Bahia Tortugas, where the waters are cooler and temperate seagrasses and macroalgae are the dominant benthic flora. The second site (Queen) in Bahia Sebastian Vizcaino was …

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An Exercise In Forecasting Loop Current And Eddy Frontal Positions In The Gulf Of Mexico, Lie-Yauw Oey, Tal Ezer, George Forristall, C. Cooper, Steven Dimarco, S. Fan Jan 2005

An Exercise In Forecasting Loop Current And Eddy Frontal Positions In The Gulf Of Mexico, Lie-Yauw Oey, Tal Ezer, George Forristall, C. Cooper, Steven Dimarco, S. Fan

CCPO Publications

As part of a model-evaluation exercise to forecast Loop Current and Loop Current eddy frontal positions in the Gulf of Mexico, the Princeton Regional Ocean Forecast System (PROFS) is tested to forecast 14 4-week periods Aug/25/99- Sep/20/00, during which a powerful eddy, Eddy Juggernaut (Eddy-J) separated from the Loop Current and propagated southwestward. To initialize each forecast, PROFS assimilates satellite sea surface height (SSH) anomaly and temperature (SST) by projecting them into subsurface density using a surface/subsurface correlation that is a function of the satellite SSH anomaly. The closest distances of the forecast fronts from seven fixed stations in the …

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Cluster Issue On Microplasmas, Kurt H. Becker, J. Gary Eden, Karl H. Schoenbach Jan 2005

Cluster Issue On Microplasmas, Kurt H. Becker, J. Gary Eden, Karl H. Schoenbach

Bioelectrics Publications

Atmospheric-pressure diffuse discharge plasmas are susceptible to instabilities and, in particular, to arcing (the glow-to-arc transition). Some of the most promising approaches to ‘stabilizing’ atmospheric-pressure plasmas are based on the recognition that arc formation can be avoided when the plasmas are generated and maintained in spatially constricted geometries with dimensions from tens to hundreds of microns. Known as microplasmas or microdischarges, these weakly-ionized discharges represent a new and fascinating realm of plasma science in which several scientific issues, such as the potential breakdown of pd scaling and the role of boundary-based phenomena, come to the fore. In contrast to ‘macroplasmas’ …

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Absorption And Backscattering In The Beaufort And Chukchi Seas, Jian Wang, Glenn F. Cota, David A. Ruble Jan 2005

Absorption And Backscattering In The Beaufort And Chukchi Seas, Jian Wang, Glenn F. Cota, David A. Ruble

CCPO Publications

Bio-optical observations were made during August 2000 in the Beaufort and Chukchi Seas. Chlorophyll a concentration (Chl) ranged from 0.068 to 18.5 mg chl m-3. Both total particulate and phytoplankton absorption at 443 nm were closely correlated with chlorophyll concentration. Linear spectral relationships were observed for phytoplankton absorption. The chlorophyll-specific absorption of phytoplankton at 443 nm was nearly constant at 0.013 m2 (mg chl)-1, but particulate absorption due to nonpigmented particulates at 443 nm was highly variable. There was no strong correlation between chlorophyll concentration and absorption by soluble materials or nonpigmented particulates. Absorption, scattering, …

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Circulation, Mixing And The Distribution Of Remineralized Nutrients, Larry P. Atkinson, John Huthnance, Jose L. Blanco Jan 2005

Circulation, Mixing And The Distribution Of Remineralized Nutrients, Larry P. Atkinson, John Huthnance, Jose L. Blanco

CCPO Publications

No abstract provided.

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A Review Of Phytoplankton Composition Within Chesapeake Bay And Its Tidal Estuaries, Harold G. Marshall, Lubomira Burchardt, Richard Lacouture Jan 2005

A Review Of Phytoplankton Composition Within Chesapeake Bay And Its Tidal Estuaries, Harold G. Marshall, Lubomira Burchardt, Richard Lacouture

Biological Sciences Faculty Publications

Based on a continuous 20-year data base ofmonthly sampling in Chesapeake Bay and tidal regions of its major tributaries, 1454 phytoplankton taxa have been identified in these waters. They represent a diverse assemblage of species with a dominant diatom flora throughout the year, in addition to large seasonal representation by chlorophytes, cyanobacteria, cryptophytes and dinoflagellates. Included among this flora were 34 potential harmful or toxin producing species. The phytoplankton compositions associated with the seasonal successional patterns are discussed, in addition to characterizing the dominant floral relationships, with comparison to early composition records within the Bay. Several of the present day …

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Energy-Efficient Self-Organization Protocols For Sensor Networks, Qingwen Xu Jan 2005

Energy-Efficient Self-Organization Protocols For Sensor Networks, Qingwen Xu

Computer Science Theses & Dissertations

A Wireless Sensor Network (WSN, for short) consists of a large number of very small sensor devices deployed in an area of interest for gathering and delivery information. The fundamental goal of a WSN is to produce, over an extended period of time, global information from local data obtained by individual sensors. The WSN technology will have a significant impact on a wide array of applications on the efficiency of many civilian and military applications including combat field surveillance, intrusion detection, disaster management among many others. The basic management problem in the WSN is to balance the utility of the …

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Inclusive And Exclusive Compton Processes In Quantum Chromodynamics, A. Psaker Jan 2005

Inclusive And Exclusive Compton Processes In Quantum Chromodynamics, A. Psaker

Physics Theses & Dissertations

In our work, we describe two types of Compton processes. As an example of an inclusive process, we consider the high-energy photoproduction of massive muon pairs off the nucleon. We analyze the process in the framework of the QCD parton model, in which the usual parton distributions emerge as a tool to describe the nucleon in terms of quark and gluonic degrees of freedom. To study its exclusive version, a new class of phenomenological functions is required, namely, generalized parton distributions. They can be considered as a generalization of the usual parton distributions measured in deeply inelastic lepton-nucleon scattering. Generalized …

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Melting And Solidification Study Of Indium And Bismuth Nanocrystals Using Reflection High-Energy Electron Diffraction, Mohamed K. Zayed Jan 2005

Melting And Solidification Study Of Indium And Bismuth Nanocrystals Using Reflection High-Energy Electron Diffraction, Mohamed K. Zayed

Electrical & Computer Engineering Theses & Dissertations

As technology begins to utilize nanocrystals for many chemical, biological, medical, electrical, and optoelectrical applications, there is a growing need for an understanding of their fundamental properties. The study of melting and solidification of nanocrystals is of interest to fundamental understanding of the effect of reduced size and crystal shape on the solid-liquid phase transition. Melting and solidification of as-deposited and recrystallized indium and bismuth nanocrystals were studied using reflection high-energy electron diffraction (RHEED). The nanocrystals were thermally deposited on highly oriented 002-graphite substrate at different deposition temperatures. The growth dynamics of the nanocrystals was studied using in situ RHEED …

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Exclusive Ρ0 Meson Electroproduction From Hydrogen At Clas, C. Hadjidakis, M. Guidal, M. Garçon, J.-M. Laget, E. S. Smith, M. Vanderhaeghen, G. Adams, P. Ambrozewicz, E. Anciant, M. Anghinolfi, H. Bagdasaryan, K. V. Dharmawardane, G. E. Dodge, T. A. Forest, G. Gavalian, M. Guler, C. E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, R. A. Niyazov, L. M. Qin, F. Sabatie, L. B. Weinstein, J. Yun Jan 2005

Exclusive Ρ0 Meson Electroproduction From Hydrogen At Clas, C. Hadjidakis, M. Guidal, M. Garçon, J.-M. Laget, E. S. Smith, M. Vanderhaeghen, G. Adams, P. Ambrozewicz, E. Anciant, M. Anghinolfi, H. Bagdasaryan, K. V. Dharmawardane, G. E. Dodge, T. A. Forest, G. Gavalian, M. Guler, C. E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, R. A. Niyazov, L. M. Qin, F. Sabatie, L. B. Weinstein, J. Yun

Physics Faculty Publications

The longitudinal and transverse components of the cross section for the ep → e′ pρ0 reaction were measured in Hall B at Jefferson Laboratory using the CLAS detector. The data were taken with a 4.247 GeV electron beam and were analyzed in a range of xB from 0.2 to 0.6 and of Q2 from 1.5 to 3.0 GeV2. The data are compared to a Regge model based on effective hadronic degrees of freedom and to a calculation based on Generalized Parton Distributions. It is found that, at our lowest xB values, the transverse part of the …

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Exclusive Photoproduction Of The Cascade Ξ Hyperons, H. Bagdasaryan, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, T. A. Forest, G. Gavalian, N. Guler, C. E. Hyde-Wright, A. V. Klimenko, S. E. Kuhn, L. M. Qin, L. B. Weinstein, J. Yun, Et Al., Clas Collaboration Jan 2005

Exclusive Photoproduction Of The Cascade Ξ Hyperons, H. Bagdasaryan, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, T. A. Forest, G. Gavalian, N. Guler, C. E. Hyde-Wright, A. V. Klimenko, S. E. Kuhn, L. M. Qin, L. B. Weinstein, J. Yun, Et Al., Clas Collaboration

Physics Faculty Publications

We report on the first measurement of exclusive Ξ-(1321) hyperon photoproduction in 𝛾p → K+K+Ξ- for 3.2 < E𝛾 < 3.9 GeV. The final state is identified by the missing mass in p(𝛾,K+K+)X measured with the CLAS detector at Jefferson Laboratory. We have detected a significant number of the ground state Ξ-(1321)1/2+ and have estimated the total cross section for its production. We also have strong evidence for the first excited state Ξ-(1530)3/2+. Photoproduction provides a copious source of Ξ's. We discuss the possibilities of a search for the recently proposed Ξ5- and Ξ5+ …

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Global Analysis Of Data On The Proton Structure Function G₁ And The Extraction Of Its Moments, M. Osipenko, S. Simula, W. Melnitchouk, P. Bosted, V. Burkert, E. Christy, K. Griffioen, C. Keppel, S. Kuhn, G. Ricco Jan 2005

Global Analysis Of Data On The Proton Structure Function G₁ And The Extraction Of Its Moments, M. Osipenko, S. Simula, W. Melnitchouk, P. Bosted, V. Burkert, E. Christy, K. Griffioen, C. Keppel, S. Kuhn, G. Ricco

Physics Faculty Publications

Inspired by recent measurements with the CLAS detector at Jefferson Lab, we perform a self-consistent analysis of world data on the proton structure function g1 in the range 0.17 < Q2 < 30 (GeV/c)2. We compute for the first time low-order moments of g, and study their evolution from small to large values of Q2. The analysis includes the latest data on both the unpolarized inclusive cross sections and the ratio R = σ L/σT from Jefferson Lab, as well as a new model for the transverse asymmetry A2 in the resonance region. The contributions of …

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Higher Twist Analysis Of The Proton G₁ Structure Function, M. Osipenko, W. Melnitchouk, S. Simula, P. Bosted, V. Burkert, M. E. Christy, K. Griffioen, C. Keppel, S. E. Kuhn Jan 2005

Higher Twist Analysis Of The Proton G₁ Structure Function, M. Osipenko, W. Melnitchouk, S. Simula, P. Bosted, V. Burkert, M. E. Christy, K. Griffioen, C. Keppel, S. E. Kuhn

Physics Faculty Publications

We perform a global analysis of all available spin-dependent proton structure function data, covering a large range of Q2, 1 ⩽ Q2 ⩽ 30 GeV2, and calculate the lowest moment of the g1 structure function as a function of Q2. From the Q2 dependence of the lowest moment we extract matrix elements of twist-4 operators, and determine the color electric and magnetic polarizabilities of the proton to be XE= 0.026 ± 0.015(stat) ± 0.0210.024 (sys) and XB= -0.013 ∓ 0.007(stat) ∓ 0.010 0.012(sys), respectively.

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Final Report For The Development Of The Nasa Technical Report Server (Ntrs), Michael L. Nelson Jan 2005

Final Report For The Development Of The Nasa Technical Report Server (Ntrs), Michael L. Nelson

Computer Science Faculty Publications

The author performed a variety of research, development and consulting tasks for NASA Langley Research Center in the area of digital libraries (DLs) and supporting technologies, such as the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH). In particular, the development focused on the NASA Technical Report Server (NTRS) and its transition from a distributed searching model to one that uses the OAI-PMH. The Open Archives Initiative (OAI) is an international consortium focused on furthering the interoperability of DLs through the use of "metadata harvesting". The OAI-PMH version of NTRS went into public production on April 28, 2003. Since that …

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Introduction: Data Communication And Topology Algorithms For Sensor Networks, Stephan Olariu, David Simplot-Ryl, Ivan Stojmenovic Jan 2005

Introduction: Data Communication And Topology Algorithms For Sensor Networks, Stephan Olariu, David Simplot-Ryl, Ivan Stojmenovic

Computer Science Faculty Publications

(First paragraph) We are very proud and honored to have been entrusted to be Guest Editors for this special issue. Papers were sought to comprehensively cover the algorithmic issues in the “hot” area of sensor networking. The concentration was on network layer problems, which can be divided into two groups: data communication problems and topology control problems. We wish to briefly introduce the five papers appearing in this special issue. They cover specific problems such as time division for reduced collision, fault tolerant clustering, self-stabilizing graph optimization algorithms, key pre-distribution for secure communication, and distributed storage based on spanning trees …

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Self-Assembly Of Ge Quantum Dots On Si(100)- 2×1 By Pulsed Laser Deposition, M. S. Hegazy, H. E. Elsayed-Ali Jan 2005

Self-Assembly Of Ge Quantum Dots On Si(100)- 2×1 By Pulsed Laser Deposition, M. S. Hegazy, H. E. Elsayed-Ali

Electrical & Computer Engineering Faculty Publications

Self-assembled Ge quantum dots are grown on Si(100)- 2×1 by pulsed laser deposition. The growth is studied by in situ reflection high-energy electron diffraction and postdeposition atomic force microscopy. After the completion of the wetting layer, transient hut clusters, faceted by different planes, are observed. When the height of these clusters exceeded a certain value, the facets developed into {305} planes. Some of these huts become {305}-faceted pyramids as the film mean thickness was increased. With further thickness increase, dome clusters developed on the expense of these pyramids. © 2005 American Institute of Physics. [DOI: 10.1063/1.1949285]

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Effect Of Humic Substance Photodegradation On Bacterial Growth And Respiration In Lake Water, Alexandre M. Anesio, William Granéli, George R. Aiken, David J. Kieber, Kenneth Mopper Jan 2005

Effect Of Humic Substance Photodegradation On Bacterial Growth And Respiration In Lake Water, Alexandre M. Anesio, William Granéli, George R. Aiken, David J. Kieber, Kenneth Mopper

Chemistry & Biochemistry Faculty Publications

This study addresses how humic substance (HS) chemical composition and photoreactivity affect bacterial growth, respiration, and growth efficiency (BGE) in lake water. Aqueous solutions of HSs from diverse aquatic environments representing different dissolved organic matter sources (autochthonous and allochthonous) were exposed to artificial solar UV radiation. These solutions were added to lake water passed through a 0.7-μm pore-size filter (containing grazer-free lake bacteria) followed by dark incubation for 5, 43, and 65 h. For the 5-h incubation, several irradiated HSs inhibited bacterial carbon production (BCP) and this inhibition was highly correlated with H2O2 photoproduction. The H2 …

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Optimization Of Ultraviolet Emission And Chemical Species Generation From A Pulsed Dielectric Barrier Discharge At Atmospheric Pressure, Xinpei Lu, Mounir Laroussi Jan 2005

Optimization Of Ultraviolet Emission And Chemical Species Generation From A Pulsed Dielectric Barrier Discharge At Atmospheric Pressure, Xinpei Lu, Mounir Laroussi

Electrical & Computer Engineering Faculty Publications

One of the attractive features of nonthermal atmospheric pressure plasmas is the ability to achieve enhanced gas phase chemistry without the need for elevated gas temperatures. This attractive characteristic recently led to their extensive use in applications that require low temperatures, such as material processing and biomedical applications. The agents responsible for the efficient plasma reactivity are the ultraviolet (UV) photons and the chemically reactive species. In this paper, in order to optimize the UV radiation and reactive species generation efficiency, the plasma was generated by a dielectric barrier discharge driven by unipolar submicrosecond square pulses. To keep the discharge …

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Beam-Helicity Asymmetries In Double-Charged-Pion Photoproduction On The Proton, H. Bagdasaryan, M. Bektasoglu, S. Bültmann, Gail Dodge, N. Guler, C. E. Hyde-Wright, H. G. Juengst, A. Klein, S. E. Kuhn, L. M. Qin, W. Roberts, F. Sabatié, S. Tkachenko, L. B. Weinstein, J. Yun, J. Zhang, Et Al., Clas Collaboration Jan 2005

Beam-Helicity Asymmetries In Double-Charged-Pion Photoproduction On The Proton, H. Bagdasaryan, M. Bektasoglu, S. Bültmann, Gail Dodge, N. Guler, C. E. Hyde-Wright, H. G. Juengst, A. Klein, S. E. Kuhn, L. M. Qin, W. Roberts, F. Sabatié, S. Tkachenko, L. B. Weinstein, J. Yun, J. Zhang, Et Al., Clas Collaboration

Physics Faculty Publications

Beam-helicity asymmetries for the two-pion-photoproduction reaction 𝛾⃗p → p π+π- have been studied for the first time in the resonance region for center-of-mass energies between 1.35 and 2.30 GeV. The experiment was performed at Jefferson Lab with the CEBAF Large Acceptance Spectrometer using circularly polarized tagged photons incident on an unpolarized hydrogen target. Beam-helicity-dependent angular distributions of the final-state particles were measured. The large cross-section asymmetries exhibit strong sensitivity to the kinematics and dynamics of the reaction. The data are compared with the results of various phenomenological model calculations, and show that these models currently do not …

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Predicted Properties Of Microhollow Cathode Discharges In Xenon, J. P. Boeuf, L. C. Pitchford, K. H. Schoenbach Jan 2005

Predicted Properties Of Microhollow Cathode Discharges In Xenon, J. P. Boeuf, L. C. Pitchford, K. H. Schoenbach

Bioelectrics Publications

A fluid model has been developed and used to help clarify the physical mechanisms occurring in microhollow cathode discharges (MHCD). Calculated current-voltage (I-V) characteristics and gas temperatures in xenon at 100 Torr are presented. Consistent with previous experimental results in similar conditions, we find a voltage maximum in the I-V characteristic. We show that this structure reflects a transition between a low-current, abnormal discharge localized inside the cylindrical hollow cathode to a higher-current, normal glow discharge sustained by electron emission from the outer surface of the cathode. This transition, due to the geometry of …

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Simulations Of Nanopore Formation And Phosphatidylserine Externalization In Lipid Membranes Subjected To A High-Intensity, Ultrashort Electric Pulse, Q. Hu, R. P. Joshi, K. H. Schoenbach Jan 2005

Simulations Of Nanopore Formation And Phosphatidylserine Externalization In Lipid Membranes Subjected To A High-Intensity, Ultrashort Electric Pulse, Q. Hu, R. P. Joshi, K. H. Schoenbach

Bioelectrics Publications

A combined MD simulator and time dependent Laplace solver are used to analyze the electrically driven phosphatidylserine externalization process in cells. Time dependent details of nanopore formation at cell membranes in response to a high-intensity (100kV∕cm), ultrashort (10ns) electric pulse are also probed. Our results show that nanosized pores could typically be formed within about 5ns. These predictions are in very good agreement with recent experimental data. It is also demonstrated that defect formation and PS externalization in membranes should begin on the anode side. Finally, the simulations confirm that PS externalization is a nanopore facilitated event, rather than the …

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Levitation Using Microwave-Induced Plasmas, R. J. Exton, S. Popovic, G. C. Herring, M. Cooper Jan 2005

Levitation Using Microwave-Induced Plasmas, R. J. Exton, S. Popovic, G. C. Herring, M. Cooper

Physics Faculty Publications

The levitation of objects above a microwave horn is demonstrated. High-power microwave pulses generate a low-temperature, diffuse plasma on the surface of the horn window. The thermal effect of the surface plasma brings about a localized increase in the pressure and results in a vertical flow of air, thus levitating the object.

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Burial Of Terrestrial Organic Matter In Marine Sediments: A Re-Assessment, David J. Burdige Jan 2005

Burial Of Terrestrial Organic Matter In Marine Sediments: A Re-Assessment, David J. Burdige

OES Faculty Publications

Calculations based on recent observations indicate that approximately one third of the organic matter presently being buried in marine sediments may be of terrestrial origin, with the majority of this terrestrial organic matter (TOM) burial occurring in muddy, deltaic sediments. These calculations further suggest that the remineralization of terrestrial organic matter in the oceans is also much less efficient than that of marine organic matter. These two underappreciated observations have important implications in terms of our understanding of the controls on the global carbon cycle. From a paleoceanographic perspective, the results presented here also suggest that changes in TOM burial …

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The Effect Of Growth Rate, Phosphorus Concentration, And Temperature On N-2 Fixation, Carbon Fixation, And Nitrogen Release In Continuous Cultures Of Trichodesmium Ims101, Margaret R. Mulholland, Peter W. Bernhardt Jan 2005

The Effect Of Growth Rate, Phosphorus Concentration, And Temperature On N-2 Fixation, Carbon Fixation, And Nitrogen Release In Continuous Cultures Of Trichodesmium Ims101, Margaret R. Mulholland, Peter W. Bernhardt

OES Faculty Publications

With the use of continuous culture systems, rates of dinitrogen (N2) and carbon (C) fixation and nitrogen (N)- and C-based doubling times were assessed in Trichodesmium IMS101 growing exponentially at steady state dilution rates of 0.10, 0.20, and 0.33 d-1 (doubling times of 10, 5, and 3 d - within the range reported for natural populations). Rates of C fixation, N2 fixation, and N release were examined in replicate culture systems with several techniques. Biomass-specific C uptake varied little with population doubling time, but N2 fixation and N release varied markedly among treatments. Total daily …

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Demonstration Of Toxicity To Fish And To Mammalian Cells By Pfiesteria Species: Comparison Of Assay Methods And Strains, Joann M. Burkholder, Andrew S. Gordon, Peter D. Moeller, J. Mac Law, Kathryn J. Coyne, Alan J. Lewitus, John S. Ramsdell, Harold G. Marshall, Nora J. Deamer, S. Craig Cary, Jason W. Kempton, Steven L. Morton, Parke A. Rublee Jan 2005

Demonstration Of Toxicity To Fish And To Mammalian Cells By Pfiesteria Species: Comparison Of Assay Methods And Strains, Joann M. Burkholder, Andrew S. Gordon, Peter D. Moeller, J. Mac Law, Kathryn J. Coyne, Alan J. Lewitus, John S. Ramsdell, Harold G. Marshall, Nora J. Deamer, S. Craig Cary, Jason W. Kempton, Steven L. Morton, Parke A. Rublee

Biological Sciences Faculty Publications

Toxicity and its detection in the dinoflagellate fish predators Pfiesteria piscicida and Pfiesteria shumwayae depend on the strain and the use of reliable assays. Two assays, standardized fish bioassays (SFBs) with juvenile fish and fish microassays (FMAs) with larval fish, were compared for their utility to detect toxic Pfiesteria. The comparison included strains with confirmed toxicity, negative controls (noninducible Pfiesteria strains and a related nontoxic cryptoperidiniopsoid dinoflagellate), and P. shumwayae strain CCMP2089, which previously had been reported as nontoxic. SFBs, standardized by using toxic Pfiesteria (coupled with tests confirming Pfiesteria toxin) and conditions conducive to toxicity expression, reliably detected …

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Comparison Of Phytoplankton And Autotrophic Picoplankton Populations Over A 24-Hour Period From A Pond's Surface And Subsurface Waters, Harold G. Marshall, Lubomira Burchardt, Elżbieta Wilk-Woźniak Jan 2005

Comparison Of Phytoplankton And Autotrophic Picoplankton Populations Over A 24-Hour Period From A Pond's Surface And Subsurface Waters, Harold G. Marshall, Lubomira Burchardt, Elżbieta Wilk-Woźniak

Biological Sciences Faculty Publications

Phytoplankton abundance and composition relationships within the surface layer changed over short time periods (4-6 hours) in comparison with more constant associations at 2 cm below the surface. Both strata had a diverse algal flora (>50 taxa), but no distinct neuston assemblage characterized the surface layer algal composition over the 24-hour study. The similarity between the two strata indicated the floral composition of the surface layer came from the water column algae below the surface. Chlorophytes, diatoms, cyanobacteria, and cryptophytes represented the most abundant algal categories for both strata with a total mean phytoplankton abundance of 3,566 cells ml …

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Population Dynamics Of Oryzomys Palustris And Microtus Pennsylvanicus In Virginia Tidal Marshes, Christopher P. Bloch, Robert K. Rose Jan 2005

Population Dynamics Of Oryzomys Palustris And Microtus Pennsylvanicus In Virginia Tidal Marshes, Christopher P. Bloch, Robert K. Rose

Biological Sciences Faculty Publications

Oryzomys palustris (marsh rice rat) and Microtus pennsylvanicus (meadow vole) cohabit coastal marshes in the mid-Atlantic US. Both were live-trapped for 23 months at two tidal marsh sites in Virginia to assess their demography near the margins of their distributions. In the presence of dense vegetation, population dynamics of the two species were seasonal and positively correlated, with densities declining through the winter. At the more sparsely vegetated site, densities of both species were lower, and densities of M. pennsylvanicus were negatively correlated with those of O. palustris. Patterns of reproduction differed between the species. O. palustris was reproductively …

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Phytoplankton Development Within Tidal Freshwater Regions Of Two Virginia Rivers, Usa, Harold G. Marshall, Lubomira Burchardt Jan 2005

Phytoplankton Development Within Tidal Freshwater Regions Of Two Virginia Rivers, Usa, Harold G. Marshall, Lubomira Burchardt

Biological Sciences Faculty Publications

Phytoplankton composition and the range of seasonal patterns of abundance are presented for the tidal freshwater regions in two Virginia rivers based on data accumulated monthly from 1986 through 1999. Diatoms dominated the flora during spring, summer, and fall, whereas, other taxonomic categories were more representative when the river flow rates decreased, allowing for a more stable water system and increased residency time within this tidal region during summer and early fall. This summer/fall period was associated with increased water temperatures, higher productivity rates and chlorophyll levels, increased total phytoplankton abundance and species diversity. The major components of the summer …

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The Architecture Of A Proteomic Network In The Yeast, Emad Ramadan, Christopher Osgood, Alex Pothern Jan 2005

The Architecture Of A Proteomic Network In The Yeast, Emad Ramadan, Christopher Osgood, Alex Pothern

Biological Sciences Faculty Publications

We describe an approach to clustering the yeast protein-protein inter-action network in order to identify functional modules, groups of proteins forming multi-protein complexes accomplishing various functions in the cell. We have developed a clustering method that accounts for the small-world nature of the network. The algorithm makes use of the concept of k-cores in a graph, and employs recursive spectral clustering to compute the functional modules. The computed clusters are annotated using their protein memberships into known multi-protein complexes in the yeast. We also dissect the protein interaction network into a global subnetwork of hub proteins (connected to several clusters), …

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