Physical Sciences and Mathematics Commons^™

Evaluation Of Large‑Scale Meteorological Patterns Associated With Temperature Extremes In The Narccap Regional Climate Model Simulations, Paul C. Loikith, Duane E. Waliser, Huikyo Lee, J. David Neelin, Benjamin Lintner, Seth Mcginnis, Linda Mears, Jinwon Kim

Geography Faculty Publications and Presentations

Large-scale meteorological patterns (LSMPs) associated with temperature extremes are evaluated in a suite of regional climate model (RCM) simulations contributing to the North American Regional Climate Change Assessment Program. LSMPs are characterized through composites of surface air temperature, sea level pressure, and 500 hPa geopotential height anomalies concurrent with extreme temperature days. Six of the seventeen RCM simulations are driven by boundary conditions from reanalysis while the other eleven are driven by one of four global climate models (GCMs). Four illustrative case studies are analyzed in detail. Model fidelity in LSMP spatial representation is high for cold winter extremes near …

Stressors And Strategies For Managing Urban Water Scarcity: Perspectives From The Field, Vivek Shandas, Rosa Lehman, Kelli L. Larson, Jeremy Bunn, Heejun Chang

Urban Studies and Planning Faculty Publications and Presentations

Largely because water resource planning in the U.S. has been separated from land-use planning, opportunities for explicitly linking planning policies to water availability remain unexamined. The pressing need for better coordination between land-use planning and water management is amplified by changes in the global climate, which will place even greater importance on managing water supplies and demands than in the past. By surveying land and water managers in two urbanizing regions of the western United States—Portland, Oregon and Phoenix Arizona—we assessed the extent to which their perspectives regarding municipal water resource management align or differ. We specifically focus on characterizing …

Utilizing Humidity And Temperature Data To Advance Monitoring And Prediction Of Meteorological Drought, Ali Behrangi, Paul C. Loikith, Eric J. Fetzer, Hai M. Nguyen, Stephanie L. Granger

Geography Faculty Publications and Presentations

The fraction of land area over the Continental United States experiencing extreme hot and dry conditions has been increasing over the past several decades, consistent with expectation from anthropogenic climate change. A clear concurrent change in precipitation, however, has not been confirmed. Vapor pressure deficit (VPD), combining temperature and humidity, is utilized here as an indicator of the background atmospheric conditions associated with meteorological drought. Furthermore, atmospheric conditions associated with warm season drought events are assessed by partitioning associated VPD anomalies into the temperature and humidity components. This approach suggests that the concurrence of anomalously high temperature and low humidity …

Polymeric Porphyrins As Solar Photocatalysts, Nicholas Upton Day

Dissertations and Theses

Research concentrated on the absorption, transformation, and storage of light energy is useful for the energy challenges faced by humanity. In particular, photocatalysis using solar energy to generate useful fuels has become a primary research goal in the drive to replace fossil fuels for the future. In this dissertation it is shown that poly-tetra(4-aminophenyl)porphyrin (pTAPP) can be oxidatively polymerized using a variety of methods, including electropolymerization, chemical oxidation, and interfacial polymerization and that pTAPP has photocatalytic ability to reduce O₂ to H₂O₂ for a storable fuel.

Organic conductive polymers such as pTAPP are attractive catalysts because …

Removal Of Multiple-Tip Artifacts From Scanning Tunneling Microscope Images By Crystallographic Averaging, Jack C. Straton, Bill Moon, Taylor T. Bilyeu, Peter Moeck

Physics Faculty Publications and Presentations

Crystallographic image processing (CIP) techniques may be utilized in scanning probe microscopy (SPM) to glean information that has been obscured by signals from multiple probe tips. This may be of particular importance for scanning tunneling microscopy (STM) and requires images from samples that are periodic in two dimensions (2D). The image-forming current for double-tips in STM is derived with a slight modification of the independent-orbital approximation (IOA) to allow for two or more tips. Our analysis clarifies why crystallographic averaging works well in removing the effects of a blunt STM tip (that consists of multiple mini-tips) from recorded 2D periodic …

Design And Synthesis Of Novel Chloroquine-Based Antimalarials, Kevin Vincent Murphy

Dissertations and Theses

Malaria is an infectious, often fatal disease that afflicts nearly 200 million people every year. The disease, characterized by recurring and extreme flu-like symptoms, is caused by the protozoan parasite Plasmodium falciparum. Victims usually contract the disease through a mosquito vector. Chloroquine is a chemotherapeutic that was introduced in the 1940s. For many years the drug was the foremost treatment of malaria, being effective and producing few side effects. Unfortunately, tolerance to chloroquine developed when the parasite evolved a resistance mechanism. Newer drugs have been developed and implemented, but these medicines also show a decreasing effect with continued administration. …

General Formalism For Singly-Thermostated Hamiltonian Dynamics, John D. Ramshaw

Physics Faculty Publications and Presentations

A general formalism is developed for constructing modified Hamiltonian dynamical systems which preserve a canonical equilibrium distribution by adding a time evolution equation for a single additional thermostat variable. When such systems are ergodic, canonical ensemble averages can be computed as dynamical time averages over a single trajectory. Systems of this type were unknown until their recent discovery by Hoover and colleagues. The present formalism should facilitate the discovery, construction, and classification of other such systems by encompassing a wide class of them within a single unified framework. This formalism includes both canonical and generalized Hamiltonian systems in a state …

Gc/Ms Analysis Of Some Extractives From Eichhornia Crassipes, Héctor A. Fileto-Pérez, O. Miriam Rutiaga-Quiñones, Mark D. Sytsma, Isabelle M. Lorne, Wentai Luo, James F. Pankow, José G. Rutiaga-Quiñones

Environmental Science and Management Faculty Publications and Presentations

Eichhornia crassipes (water hyacinth) is an invasive weed that causes serious issues for rivers, lakes, and other reservoirs around the world, although it can be an excellent source for bioactive compounds such as phytosterols and some steroids found in many plants. In this study, water hyacinth samples from both Durango and Distrito Federal in Mexico were collected. Ascendant extracts (cyclohexane, hexane, acetone, and methanol) from their leaves, stems, and roots were analyzed. Using boron trifluoride (similar to 10% [similar to 1.3 M] in 1-butanol), all extracts were derivatized. Twenty-four derivatized samples were analyzed using a gas chromatography-mass spectrometry (GC/MS) method. …

Increased Taxonomic And Functional Similarity Does Not Increase The Trophic Similarity Of Communities, Thomas K. Pool, Julien Cucherousset, Stéphanie Boulêtreau, Sébastien Villéger, Angela L. Strecker, Gaël Grenouillet

Environmental Science and Management Faculty Publications and Presentations

Aim: Despite a long-standing research interest in the association between the biodiversity (i.e. taxonomic and functional composition) and trophic structure of communities, our understanding of the relationship remains limited. Community assembly theory predicts that niche partitioning will result in communities with a diverse array of functional traits, which in turn may facilitate a correspondingly diverse array of trophic interactions that define the trophic niche of those communities. The aim of our study is to test this prediction.

Methods: We built a database composed of functional traits and stable isotope values (δ¹³C and δ¹⁵N) for …

Dreissenid Mussel Research Priorities Workshop, Mark D. Sytsma, Stephen Phillips, Timothy D. Counihan

Center for Lakes and Reservoirs Publications and Presentations

Currently, dreissenid mussels have yet to be detected in the northwestern part of the United States and western Canada. Infestation of one of the jurisdictions within the mussel-free Pacific Northwest would likely have significant economic, soci­etal and environmental implications for the entire region. Understanding the biology and environmental tolerances of dreissenid mussels, and effectiveness of various man­agement strategies, is key to prevention.

On November 4-5, 2015, the Aquatic Bioinvasion Research and Policy Institute and the Center for Lakes and Reservoirs at Portland State University, the US Geological Survey, and the Pacific States Marine Fisheries Commission, convened a Dreissenid Mussel Research …

Convergence Of Microclimate In Residential Landscapes Across Diverse Cities In The United States, Sharon J. Hall, J Learned, Benjamin Ruddell, Kelli L. Larson, Jeannine Cavender-Bares, Neil D. Bettez, Peter M. Groffman, J. Morgan Grove, James B. Heffernan, Sarah E. Hobbie, Kristen Larson, Jennifer L. Morse, Christopher Neill, Kristen C. Nelson, Jarlath O'Neil-Dunne, Laura A. Ogden, Diane E. Pataki, William D. Pearse, Colin Polsky, Rinku Roy Chowdhury, Meredith K. Steele, Tara Trammell

Environmental Science and Management Faculty Publications and Presentations

Context The urban heat island (UHI) is a welldocumented pattern of warming in cities relative to rural areas. Most UHI research utilizes remote sensing methods at large scales, or climate sensors in single cities surrounded by standardized land cover. Relatively few studies have explored continental-scale climatic patterns within common urban microenvironments such as residential landscapes that may affect human comfort.

Objectives We tested the urban homogenization hypothesis which states that structure and function in cities exhibit ecological ‘‘sameness’’ across diverse regions relative to the native ecosystems they replaced.

Methods We deployed portable micrometeorological sensors to compare air temperature and humidity …

The Rna World: 4,000,000,050 Years Old, Niles Lehman

Chemistry Faculty Publications and Presentations

The notion that molecular systems such as RNA can display a wide range of evolutionary processes in the absence of fully formed cellular life continues to gain support. Understanding how RNA can behave in an abiotic context is a key piece of our picture of how life developed and expanded on the Earth, and by proxy, elsewhere. We can study how RNA behaves in this regard through a combination of in vivo work (with small regulatory RNAs and larger catalytic RNAs alike), experimental work in the laboratory, and through powerful analytical and simulation studies. These efforts will not only grant …

Prediction: The Quintessential Model Validation Test, Wayne Wakeland

Systems Science Friday Noon Seminar Series

It is essential to objectively test how well policy models predict real world behavior. The method used to support this assertion involves the review of three SD policy models emphasizing the degree to which the model was able to fit the historical outcome data and how well model-predicted outcomes matched real world outcomes as they unfolded. Findings indicate that while historical model agreement is a favorable indication of model validity, the act of making predictions without knowing the actual data, and comparing these predictions to actual data, can reveal model weaknesses that might be overlooked when all of the available …

Geometric Approach To Convex Subdifferential Calculus, Boris S. Mordukhovich, Nguyen Mau Nam

Mathematics and Statistics Faculty Publications and Presentations

In this paper, we develop a geometric approach to convex subdifferential calculus in finite dimensions with employing some ideas of modern variational analysis. This approach allows us to obtain natural and rather easy proofs of basic results of convex subdifferential calculus in full generality and also derive new results of convex analysis concerning optimal value/marginal functions, normals to inverse images of sets under set-valued mappings, calculus rules for coderivatives of single-valued and set-valued mappings, and calculating coderivatives of solution maps to parameterized generalized equations governed by set-valued mappings with convex graphs.

Ozone Reaction With Interior Building Materials: Influence Of Diurnal Ozone Variation, Temperature And Humidity, Donghyun Rim, Elliott T. Gall, Randy L. Maddalena, William W. Nazaroff

Mechanical and Materials Engineering Faculty Publications and Presentations

Elevated tropospheric ozone concentrations are associated with increased morbidity and mortality. Indoor ozone chemistry affects human exposure to ozone and reaction products that also may adversely affect health and comfort. Reactive uptake of ozone has been characterized for many building materials; however, scant information is available on how diurnal variation of ambient ozone influences ozone reaction with indoor surfaces. The primary objective of this study is to investigate ozone-surface reactions in response to a diurnally varying ozone exposure for three common building materials: ceiling tile, painted drywall, and carpet tile. A secondary objective is to examine the effects of air …

Short-Tailed Temperature Distributions Over North America And Implications For Future Changes In Extremes, Paul C. Loikith, J. David Neelin

Geography Faculty Publications and Presentations

Some regions of North America exhibit nonnormal temperature distributions. Shorter-than-Gaussian warm tails are a special subset of these cases, with potentially meaningful implications for future changes in extreme warm temperatures under anthropogenic global warming. Locations exhibiting shorter-than-Gaussian warm tails would experience a greater increase in extreme warm temperature exceedances than a location with a Gaussian or long warm-side tail under a simple uniform warm shift in the distribution. Here we identify regions exhibiting such behavior over North America and demonstrate the effect of a simple warm shift on changes in extreme warm temperature exceedances. Some locations exceed the 95th percentile …

Effects Of Aerial Exposure On Preservation Of Low-Temperature Calothrix Biosignatures In Silica Sinter From Queen's Laundry, Yellowstone National Park, Usa, Shana Kendall

Dissertations and Theses

Mineral-depositing hydrothermal ecosystems, such as the hot springs in Yellowstone National Park, provide an unparalleled opportunity to document how microbial biosignatures form and contribute to the body of evidence indicative of the microbial inhabitants of active hot springs. Mineralization of microbial communities in silica-depositing hot springs can result in the preservation of microbial biofacies in the geologic record. To determine the effects of prolonged aerial exposure on the preservation potential of mid-to-low temperature cyanobacteria dominated microbial communities that are typically permineralized in the siliceous sinter, modern biofacies samples of such communities were collected from the active and inactive parts of …

Phase Considerations In The Gas/Particle Partitioning Of Organic Amines In The Atmosphere, James F. Pankow

Chemistry Faculty Publications and Presentations

Amines in the atmosphere are of interest because of their likely role in new particle formation, and because of anthropogenic emissions of amines at post-combustion carbon capture (PCCC) facilities. A conceptual framework for considering the partitioning of a monobasic amine (Am = unprotonated "free-base form) from the gas phase to atmospheric particulate matter (PM) is presented for cases when the PM may be composed of multiple liquid phases. Three types of liquid phases are considered as being individually or simultaneously possible for absorptive uptake of atmospheric amines: w) a mostly water phase; α ) a mostly (by mass) organic phase …

Does Gender Matter? Human Elephant Conflict In Sri Lanka: A Gendered Analysis Of Human Elephant Conflict And Natural Resource Management In A Rural Sri Lankan Village, Katherine Eileen Griffin

Dissertations and Theses

This study is a gendered analysis of natural resource management at the local scale of a poor rural Sri Lankan village in a conservation buffer zone. This village experiences destruction of forests and human elephant conflict. The objective of this study is to gain an in-depth knowledge of residents' use and understandings of environmental resources, and to investigate if gender helps shape these factors. This study relies on a social sustainability conceptual framework. It tracks participation of local women and men in natural resource management, and in conservation within and outside of the Bibile community. Local nongovernmental organizations focus on …

Antimalarial Drug Discovery Using Triazoles To Overcome Chloroquine Resistance, Elias Sibhatu Tesfaselassie

Dissertations and Theses

Malaria is considered as one of the most prevalent and debilitating diseases affecting humans. Plasmodium falciparum is the most virulent form of the parasite which developed resistance to several antimalarial drugs. Chloroquine is one of the most successful antimalarials developed that is safe, effective, and cheap. However, its use has been limited due to the emergence of drug resistance. Click chemistry, particularly, the copper(I)-catalyzed reaction between azides and alkynes has shown to have a cutting-edge advantage in medicinal chemistry by its reliability, selectivity and biocompatibility.

Triazole-based antimalarials were synthesized via copper(I)-catalyzed alkyne-azide cycloaddition reaction by modifying the aliphatic chains terminal …

Diurnal And Seasonal Variations Of No, No2 And Pm2.5 Mass As A Function Of Traffic Volumes Alongside An Urban Arterial, Christine M. Kendrick, Peter Koonce, Linda A. George

Environmental Science and Management Faculty Publications and Presentations

Urban arterial corridors are landscapes that give rise to short and long-term exposures to transportation-related pollution. With high traffic volumes and a wide mix of road users, urban arterial environments are important targets for improved exposure assessment to traffic-related pollution. A common method to estimate exposure is to use traffic volumes as a proxy. The study presented here analyzes a unique yearlong dataset of simultaneous roadside air quality and traffic observations for a U.S. arterial to assess the reliability of using traffic volumes as a proxy for traffic-related exposure. Results show how the relationships of traffic volumes with NO and …

Formaldehyde From E-Cigarettes - It's Not As Simple As Some Suggest, James F. Pankow, Robert M. Strongin, David H. Peyton

Chemistry Faculty Publications and Presentations

The Authors address critics of a previously published letter to the Editor in The New England Journal of Medicine, pertaining to hidden formaldehyde in E-Cigarette aerosols and the need for future testing of their safety.

Hydrogeologic Investigation Of A Pumice Aquifer, Fremont/Winema National Forest, Oregon, Jonathan Michael Weatherford

Dissertations and Theses

The middle Holocene cataclysmic eruption of Mount Mazama blanketed Walker Rim, in south central Oregon, with 270 cm to 300 cm of pumice, causing capture of surface water systems by groundwater, stream relocation, and the formation of biologically diverse fens and seasonal wetlands. The pumice aquifer at Round Meadow, an 8.6 km² basin, hosts both a fen and seasonally ponded wetlands. The Round Meadow watershed lies within a closed basin between the upper Klamath and Deschutes river basins. As the highest meadow at Walker Rim, it is a relatively well-constrained system to study the effects of hydrological disruption.

A …

Nonstationary Internal Tides Observed Using Dual-Satellite Altimetry, Edward D. Zaron

Civil and Environmental Engineering Faculty Publications and Presentations

Dual-satellite crossover data from the Jason-2 and Cryosat-2 altimeter missions are used in a novel approach to quantify stationary and nonstationary tides from time-lagged mean square sea surface height (SSH) differences, computed for lags from 1 to 1440 h (60 days). The approach is made feasible by removing independent estimates of the stationary tide and mesoscale SSH variance, which greatly reduces the sampling error of the SSH statistics. For the semidiurnal tidal band, the stationary tidal variance is approximately 0.73 cm(2), and the nonstationary variance is about 0.33 cm(2), or 30% of the total. The temporal correlation of the nonstationary …

A Geospatial Tool For Wetland Prioritization At The Watershed Scale, Debra Sue Blackmore, Heejun Chang

Institute for Natural Resources Publications

There is an increasing demand for assessing ecosystem functions for freshwater wetlands, especially when comparing or prioritizing among wetlands at the watershed scale. We estimated the relative potential of selected ecosystem functions for freshwater wetlands within a watershed using widely available geospatial data. We developed four functions to estimate 1) flood storage, 2) late season flow, 3) sediment retention and 4) temperature control in four pilot watersheds in Oregon (Tualatin, Coquille, Upper Grande Ronde and Sprague). These watersheds are geographically separated from each other representing diverse ecoregion environments. Spatial analysis and geographic information system (GIS) were designed for maximum re-use, …

Molecular View Modeling Of Atmospheric Organic Particulate Matter: Incorporating Molecular Structure And Co-Condensation Of Water, James F. Pankow, Marguerite Colasurdo Marks, Kelley C. Barsanti, Abdullah Mahmud, William E. Asher, Jingyi Li, Qi Ying, Shantanu H. Jathar, Michael J. Kleeman

Chemistry Faculty Publications and Presentations

Most urban and regional models used to predict levels of organic particulate matter (OPM) are based on fundamental equations for gas/particle partitioning, but make the highly simplifying, anonymized-view (AV) assumptions that OPM levels are not affected by either: a) the molecular. characteristics of the condensing organic compounds (other than simple volatility); or b) co-condensation of water as driven by non-zero relative humidity (RH) values. The simplifying assumptions have allowed parameterized chamber results for formation of secondary organic aerosol (SOA) (e.g., “two-product” (2p) coefficients) to be incorporated in chemical transport models. However, a return towards a less simplistic (and more computationally …

Coastal Sediment Elevation Change Following Anthropogenic Mangrove Clearing, Heather Lyn Hayden, Elise F. Granek

Environmental Science and Management Faculty Publications and Presentations

Coastal mangrove forests along tropical shorelines serve as an important interface between land and sea. They provide a physical buffer protecting the coastline from erosion and act as sediment “traps” catching terrestrial sediment, thus preventing smothering of subtidal coral reefs. Coastal development that removes mangrove habitat may impact adjacent nearshore coral reefs through sedimentation and nutrient loading. We examined differences in sediment elevation change between patches of open-coast intact and anthropogenically cleared red mangroves (Rhizophora mangle) on the east side of Turneffe Atoll, Belize, to quantify changes following mangrove clearing. Samples were collected over a 24 month period at five …

Climate-Suitable Planting As A Strategy For Maintaining Forest Productivity And Functional Diversity, Matthew Joshua Duveneck, Robert M. Scheller

Environmental Science and Management Faculty Publications and Presentations

Within the time frame of the longevity of tree species, climate change will change faster than the ability of natural tree migration. Migration lags may result in reduced productivity and reduced diversity in forests under current management and climate change. We evaluated the efficacy of planting climate-suitable tree species (CSP), those tree species with current or historic distributions immediately south of a focal landscape, to maintain or increase aboveground biomass, productivity, and species and functional diversity. We modeled forest change with the LANDIS-II forest simulation model for 100 years (2000–2100) at a 2-ha cell resolution and five-year time steps within …

Transients Of Platoons With Asymmetric And Different Laplacians, Ivo Herman, Dan Martinec, J. J. P. Veerman

Mathematics and Statistics Faculty Publications and Presentations

We consider an asymmetric control of platoons of identical vehicles with nearest-neighbor interaction. Recent results show that if the vehicle uses different asymmetries for position and velocity errors, the platoon has a short transient and low overshoots. In this paper we investigate the properties of vehicles with friction. To achieve consensus, an integral part is added to the controller, making the vehicle a third-order system. We show that the parameters can be chosen so that the platoon behaves as a wave equation with different wave velocities. Simulations suggest that our system has a better performance than other nearest-neighbor scenarios. Moreover, …

A Constraint Language For Static Semantic Analysis Based On Scope Graphs, Hendrik Van Antwerpen, Pierre Néron, Andrew Tolmach, Eelco Visser, Guido Wachsmuth

Computer Science Faculty Publications and Presentations

In previous work, we introduced scope graphs as a formalism for describing program binding structure and performing name resolution in an AST-independent way. In this paper, we show how to use scope graphs to build static semantic analyzers. We use constraints extracted from the AST to specify facts about binding, typing, and initialization. We treat name and type resolution as separate building blocks, but our approach can handle language constructs—such as record field access—for which binding and typing are mutually dependent.We also refine and extend our previous scope graph theory to address practical concerns including ambiguity checking and support for …