Physical Sciences and Mathematics Commons^™

Collective Bulk And Edge Modes Through The Quantum Phase Transition In Graphene At Ν = 0, Ganpathy Murthy, Efrat Shimshoni, H. A. Fertig

Physics and Astronomy Faculty Publications

Undoped graphene in a strong, tilted magnetic field exhibits a radical change in conduction upon changing the tilt angle, which can be attributed to a quantum phase transition from a canted antiferromagnetic (CAF) to a ferromagnetic (FM) bulk state at filling factor ν = 0. This behavior signifies a change in the nature of the collective ground state and excitations across the transition. Using the time-dependent Hartree-Fock approximation, we study the collective neutral (particle-hole) excitations in the two phases, both in the bulk and on the edge of the system. The CAF has gapless neutral modes in the bulk, whereas …

The Effects Of Thermal Procedure On Transformation Temperature, Crystal Structure And Microstructure Of Cu-Al-Co Shape Memory Alloy, Y. Aydoğdu, M. Kök, F. Dağdelen, A. Aydoğdu, Ali S. Turabi, Haluk E. Karaca

Mechanical Engineering Faculty Publications

The purpose of this study is to investigate the effects of different thermal procedures of the Cu-Al-Co shape memory alloy on its crystal structure, transformation temperature and microstructure. The alloys were subjected to a heat treatment and then cooling was applied at four different conditions. After the thermal process, XRD, DSC, optical microscopy and micro-hardness measurements were carried out. The experimental studies showed that crystal structure, microstructure and transformation temperature of Cu-Al-Co alloy were changed from the cooling conditions.

Experimental Genome-Wide Determination Of Rna Polyadenylation In Chlamydomonas Reinhardtii, Stephen A. Bell, Chi Shen, Alishea Brown, Arthur G. Hunt

Plant and Soil Sciences Faculty Publications

The polyadenylation of RNA is a near-universal feature of RNA metabolism in eukaryotes. This process has been studied in the model alga Chlamydomonas reinhardtii using low-throughput (gene-by-gene) and high-throughput (transcriptome sequencing) approaches that recovered poly(A)-containing sequence tags which revealed interesting features of this critical process in Chlamydomonas. In this study, RNA polyadenylation has been studied using the so-called Poly(A) Tag Sequencing (PAT-Seq) approach. Specifically, PAT-Seq was used to study poly(A) site choice in cultures grown in four different media types—Tris-Phosphate (TP), Tris-Phosphate-Acetate (TAP), High-Salt (HS), and High-Salt-Acetate (HAS). The results indicate that: 1. As reported before, the motif UGUAA is …

Comment On “New Limits On Intrinsic Charm In The Nucleon From Global Analysis Of Parton Distributions”, Stanley J. Brodsky, Susan Gardner

Physics and Astronomy Faculty Publications

No abstract provided.

Test Of Target Independence For Free-Free Scattering In A Nd:Yag Laser Field, Nicholas L. S. Martin, B. A. Deharak

Physics and Astronomy Faculty Publications

We report measurements of one-, two-, and three-photon processes during the elastic scattering of electrons through 90^∘ by helium, argon, and molecular-nitrogen targets, in the presence of 1.17-eV photons from a Nd:YAG laser. The incident energy of the electrons was 200 and 350 eV, and the linear polarization direction of the laser was parallel to the momentum transfer direction. Our measured free-free count rates for the three processes are target independent within the experimental uncertainties, perfectly consistent with the Kroll-Watson approximation, which assumes no interaction of the laser radiation with the target.

Composting Swine Manure From High Rise Finishing Facilities, Edwin L. Ritchey, Kim Cook

Plant and Soil Sciences Research Report

Swine production has restructured considerably in recent years with increased production on fewer farms (Key et al., 2011). Most swine production facilities manage manure in liquid form either in deep pits underneath production facilities or in lagoons adjacent to the production facilities (Key et al., 2011). This management uses water to rinse manure from the facilities, which dilutes the nutrient concentration and value of the manure. The liquid forms are applied to land through irrigation systems or by liquid manure spreaders. Liquid manure management can have some operational constraints that composting eliminates (Bernal et al., 2009). The most common issue …

Extending The Latent Multinomial Model With Complex Error Processes And Dynamic Markov Bases, Simon J. Bonner, Matthew R. Schofield, Patrik Noren, Steven J. Price

Forestry and Natural Resources Faculty Publications

The latent multinomial model (LMM) of Link et al. [Biometrics 66 (2010) 178–185] provides a framework for modelling mark-recapture data with potential identification errors. Key is a Markov chain Monte Carlo (MCMC) scheme for sampling configurations of the latent counts of the true capture histories that could have generated the observed data. Assuming a linear map between the observed and latent counts, the MCMC algorithm uses vectors from a basis of the kernel to move between configurations of the latent data. Schofield and Bonner [Biometrics 71 (2015) 1070–1080] shows that this is sufficient for some models within the …

Rocks To Roads To Ruin: A Brief History Of Western Kentucky’S Rock-Asphalt Industry, 1888–1957, J. Richard Bowersox

Information Circular--KGS

The history of western Kentucky’s rock-asphalt industry required substantial research of primary sources to correct the disjointed and often conflicting record published to date. Its history is checkered with characters from visionary entrepreneurs and ambitious businessmen to financial scoundrels. The earliest evidence of exploitation of bitumen resources at the surface in western Kentucky is in Native American artifacts recovered from several sites. Early settlers in the region used heavy oil and bitumen found in seeps as lubricants and wood preservatives, among other uses. The commercial value of the widespread western Kentucky rock-asphalt deposits was first recognized in the 1880’s, leading …

Effects Of Chemical Amendments To Swine Manure On Runoff Quality, Elizabeth L. Bullock, Dwayne R. Edwards, Phillip A. Moore Jr., Richard S. Gates

Biosystems and Agricultural Engineering Faculty Publications

Land-applied swine manure can be an environmental concern when runoff losses of manure constituents occur. The use of chemical amendments to mitigate these losses has been investigated for poultry litter, but materials such as swine manure have received less attention in this context, particularly at the plot scale or larger. The objective of this experiment was to evaluate the impacts of aluminum sulfate (alum; Al₂(SO₄)₃), aluminum chloride (AlCl₃), and ferric chloride (FeCl₃) addition on runoff of selected constituents of land-applied swine manure. Manure was collected from feeder pigs fed a …

Use And Evaluation Of Lidar For Mapping Sinkholes In Royal Spring Groundwater Basin, Fidele Nsonguh Tibouo

Theses and Dissertations--Earth and Environmental Sciences

This study utilizes a digital elevation model of the surface derived from high-resolution LiDAR (Light Detection and Ranging) and aerial-image technologies to map sinkholes in the Royal Spring groundwater basin. Shade-relief maps, with vertical exaggeration, were very helpful in the initial characterization of depressions. Then, aerial-photography sets were likewise helpful in identifying man-made structures such as retention basins, swimming pools, and parking lots, and to identify new sinkholes.

Field checking was necessary to further define depressions into two categories: 1.) potential sinkholes and 2.) probable sinkholes. This study had a lower success rate (50 percent) for identifying sinkholes via LiDAR …

Mobility Of Escherichia Coli Within Karst Terrains, Kentucky, Usa, Ashley M. Bandy

Theses and Dissertations--Earth and Environmental Sciences

Bacterial contamination of karst aquifers is a concern as water quality across the globe deteriorates in the face of decreasing water security. This study examined the transport and attenuation of two non-virulent isolates of Escherichia coli in relation to traditional groundwater tracers such as rhodamine WT dye and latex microspheres in two karst regions in Kentucky. Differential movement between the four tracers was observed in both epikarst and karst aquifer traces, with differences in behavior dependent on flow conditions. Attenuation was greater for the bacterial isolate containing the iha gene, compared to the isolate containing the kps gene. Microspheres of …

Denali In A Box: Analog Experiments Modeled After A Natural Setting Provide Insight On Gentle Restraining Bend Deformation, Anne M. Fendick

Theses and Dissertations--Earth and Environmental Sciences

The Mount McKinley restraining bend (MMRB) creates an ~18° left-step in the arcuate surface trace of the dextral Denali Fault in south-central Alaska. Despite being a large, crustal-scale fault, little is understood about the controls on deformation within the MMRB. Similarities between previous wet kaolin analog modeling and the MMRB suggest that the first-order deformation patterns may derive from similar mechanisms. We compare uplift patterns, localization of deformation, formation of new faults, and displacement fields from the analog model and the natural setting to assess the influence of different variables on the overall system. Despite strong rheological heterogeneity in the …

Field, Geochronologic, And Geochemical Constraints On Late Precambrian To Early Paleozoic Terrane Accretion In The Southern Appalachian Blue Ridge Province, Emma A. Larkin

Theses and Dissertations--Earth and Environmental Sciences

Xenolith-bearing orthogneiss of Amazonian affinity discovered in the Dellwood quadrangle in the Blue Ridge basement complex represents the oldest crustal component of the southern Appalachians (1.33 – 1.37 Ga: Quinn, 2012). New U-Pb zircon ages for migmatitic paragneiss of the Cartoogechaye terrane exposed in the Dellwood quadrangle reveal two unique detrital zircon age signatures that indicate either a local eastern Laurentian margin source or an exotic source. Detailed mapping, whole rock geochemistry, and U-Pb zircon geochronology were conducted to determine whether this exotic crustal component extends farther south into the Hazelwood 7.5” quadrangle. Lithological similarities exist between paragneisses in the …

Effect Of Spalled Particles Thermal Degradation On A Hypersonic Flow Field Environment, Raghava S. C. Davuluri, Huaibao Zhang, Alexandre Martin

Mechanical Engineering Faculty Publications

Two-way coupling is performed between a spallation code and a hypersonic aerothermodynamics CFD solver to evaluate the effect of spalled particles on the flow field. Time accurate solutions are computed in argon and air flow fields. A single particle simulations and multiple particles simulations are performed and studied. The results show that the carbon vapor released by spalled particles tend to change the composition of the flow field, particularly the upstream region of the shock.

A Model For Spheroid Versus Monolayer Response Of Sk-N-Sh Neuroblastoma Cells To Treatment With 15-Deoxy-Pgj2, Dorothy I. Wallace, Ann Dunham, Paula X. Chen, Michelle Chen, Milan Huynh, Evan Rheingold, Olivia F. Prosper

Mathematics Faculty Publications

Researchers have observed that response of tumor cells to treatment varies depending on whether the cells are grown in monolayer, as in vitro spheroids or in vivo. This study uses data from the literature on monolayer treatment of SK-N-SH neuroblastoma cells with 15-deoxy-PGJ₂ and couples it with data on growth rates for untreated SK-N-SH neuroblastoma cells grown as multicellular spheroids. A linear model is constructed for untreated and treated monolayer data sets, which is tuned to growth, death, and cell cycle data for the monolayer case for both control and treatment with 15-deoxy-PGJ₂. The monolayer …

The Spruce Budworm And Forest: A Qualitative Comparison Of Ode And Boolean Models, Raina Robeva, David Murrugarra

Mathematics Faculty Publications

Boolean and polynomial models of biological systems have emerged recently as viable companions to differential equations models. It is not immediately clear however whether such models are capable of capturing the multi-stable behaviour of certain biological systems: this behaviour is often sensitive to changes in the values of the model parameters, while Boolean and polynomial models are qualitative in nature. In the past few years, Boolean models of gene regulatory systems have been shown to capture multi-stability at the molecular level, confirming that such models can be used to obtain information about the system’s qualitative dynamics when precise information regarding …

Statistical Properties Of Pseudorandom Sequences, Ting Gu

Theses and Dissertations--Computer Science

Random numbers (in one sense or another) have applications in computer simulation, Monte Carlo integration, cryptography, randomized computation, radar ranging, and other areas. It is impractical to generate random numbers in real life, instead sequences of numbers (or of bits) that appear to be ``random" yet repeatable are used in real life applications. These sequences are called pseudorandom sequences. To determine the suitability of pseudorandom sequences for applications, we need to study their properties, in particular, their statistical properties. The simplest property is the minimal period of the sequence. That is, the shortest number of steps until the sequence repeats. …

Effects Of Mountaintop Removal Mining On Population Dynamics Of Stream Salamanders, Sara B. Freytag

Theses and Dissertations--Forestry and Natural Resources

Mountaintop removal mining (MTR) is a notorious stressor of stream ecosystems in the Central Appalachians. Valley fills (VF) lead to reduced occupancy, abundance, and species richness of stream salamanders. Multiple factors may be responsible for these reductions, but specifically habitat fragmentation and degradation may reduce colonization rates and increase local extinction rates. From 2013-2015, repeated counts of salamanders were conducted in stream reaches impacted by MTR/VF and compared to counts in reference reaches to answer the question: do stream salamander population dynamics differ between stream reaches impacted by MTR/VF and reference stream reaches? I also investigated dynamics of stream habitat …

It Is All About (U)Biquitin: Role Of Altered Ubiquitin-Proteasome System And Uchl1 In Alzheimer Disease, Antonella Tramutola, Fabio Di Domenico, Eugenio Barone, Marzia Perluigi, D. Allan Butterfield

Chemistry Faculty Publications

Free radical-mediated damage to macromolecules and the resulting oxidative modification of different cellular components are a common feature of aging, and this process becomes much more pronounced in age-associated pathologies, including Alzheimer disease (AD). In particular, proteins are particularly sensitive to oxidative stress-induced damage and these irreversible modifications lead to the alteration of protein structure and function. In order to maintain cell homeostasis, these oxidized/damaged proteins have to be removed in order to prevent their toxic accumulation. It is generally accepted that the age-related accumulation of “aberrant” proteins results from both the increased occurrence of damage and the decreased efficiency …

Stratigraphic, Geochemical, And Well Log Analysis Of The Wolfcamp-D Unconventional Play In The Central Midland Basin, Texas, Patrick Thomas Ryan

Theses and Dissertations--Earth and Environmental Sciences

This M.S. thesis utilizes diverse subsurface datasets from the central Midland Basin, a recently reinvigorated petroleum producing region, to better understand the depositional history of the prospective Wolfcamp-D interval. An integrated set of methods were applied to ~320 ft of drill core from Midland County (Texas). Elemental chemostratigraphy collected via x-ray fluorescence highlights the pervasive fine-scale variability in the stratigraphy of the core, and aided in the classification of three different mudrock facies types. Organic-rich, siliceous mudrocks are cyclically interbedded with aluminum-rich mudrocks and carbonates throughout the Wolfcamp-D. Trace metal correlations with total organic carbon indicate slow bottom-water recharge from …

Salvage Brachytherapy For Biochemically Recurrent Prostate Cancer Following Primary Brachytherapy, John M. Lacy, William A. Wilson, Raevti Bole, Li Chen, Ali S. Meigooni, Randall G. Rowland, William H. St. Clair

Urology Faculty Publications

Purpose. In this study, we evaluated our experience with salvage brachytherapy after discovery of biochemical recurrence after a prior brachytherapy procedure. Methods and Materials. From 2001 through 2012 twenty-one patients treated by brachytherapy within University of Kentucky or from outside centers developed biochemical failure and had no evidence of metastases. Computed tomography (CT) scans were evaluated; patients who had an underseeded portion of their prostate were considered for reimplantation. Results. The majority of the patients in this study (61.9%) were low risk and median presalvage PSA was 3.49 (range 17.41–1.68). Mean follow-up was 61 months. At last follow-up after reseeding, …

Heavy-Oil And Bitumen Resources Of The Big Clifty Sandstone, Northeastern Grayson County And Adjacent Hardin County, Kentucky, J. Richard Bowersox

Report of Investigations--KGS

Rock asphalt (bitumen-saturated sandstone) was produced from the Big Clifty Sandstone near Tar Hill and Big Clifty in northeastern Grayson County, and at Summit in adjacent Hardin County, from 1889 to 1940. Noncommercial amounts of oil were distilled from Big Clifty rock asphalt before 1930. Resource assessments conducted throughout the area during the mid-1920's described substantial rock-asphalt deposits. Later assessments in 1951, 1965, and the early 1980's, however, overlooked the northeastern Grayson County area. A new evaluation in 2015 estimated that the historically developed area between Clifty Creek and meeting Creek, and between the Summit Fault and Eveleigh Fault Zone, …

Heavy-Oil And Bitumen Resources Of The Western Kentucky Tar Sands, J. Richard Bowersox

Report of Investigations--KGS

Heavy-oil and bitumen resources in western Kentucky are present in the Upper Mississippian Big Clifty and Hardinsburg Sandstones and Lower Pennsylvanian Kyrock and Bee Spring Sandstone Members of the Caseyville Formation in a belt extending from Logan County on the south to Breckinridge and Hardin Counties on the north.

Net oil-saturated intervals in the tar sands range from 2.5 to 4.7 m thick, largely in downthrown fault blocks in and bounding the Rough Creek Graben. Records from 1,500 wells, analysis of reservoir properties from 3,769 plugs from 135 coreholes, and bulk volume of hydrocarbon calculated in 139 surface samples were …

Earthquake Hazard Mitigation In The New Madrid Seismic Zone: Science And Public Policy, Alice M. Orton, Zhenming Wang, Lanmin Wang, Edward W. Woolery

Report of Investigations--KGS

In the central United States, earthquake sources that are not well defined, long earthquake recurrence intervals, and uncertain ground-motion attenuation models have contributed to an overstatement of seismic hazard for the New Madrid Seismic Zone on the national seismic hazard maps published by the U.S. Geological Survey. A series of informal interviews in western Kentucky with local businesspersons, public officials, and other professionals in occupations associated with seismic-hazard mitigation discussed seismic-mitigation policies in relation to depressed local economy. Scientific and relative economic analysis was then performed using scenario earthquake models developed with the Federal Emergency management Agency's Hazus-MH software. The …

Development Of A Semi-Automated Methodology For Discriminating Between Natural And Manmade Seismic Events Using The Oiink Seismic Array, Paul Rodriguez Asihama

Theses and Dissertations--Earth and Environmental Sciences

Broadband waveforms from the Ozark, Indiana, Illinois, Kentucky temporary seismic array OIINK, a Flexible Array in the EarthScope project, were used to develop routines to identify and remove mine blast events from a database of local events and preserve the infrequent, small, natural earthquakes. The approach taken was to first create a database of all seismic events that were detected by the OIINK Seismic Array. False-detections, events detected from outside of the project area (approx. 302 thousand square km), and known (i.e. cataloged) local earthquake were also removed. The remaining in the database were local unknown events. During the Phase …

Injecting Liquids And Gases Deep Underground, Stephen F. Greb

Map and Chart--KGS

Every year, thousands of wells are drilled into underground reservoirs in search of water, oil, and natural gas. The gases and fluids are trapped inside tiny pores and cracks in underground reservoirs.

Mapped Karst Groundwater Basins In The Elizabethtown 30 X 60 Minute Quadrangle, James C. Currens, Robert J. Blair

Map and Chart--KGS

This map shows karst groundwater basins in the Elizabethtown 30 x 60 minute quadrangle, determined primarily by groundwater tracer studies. It can be used to quickly identify the groundwater basins and springs to which a site may drain. Major springs and the relative size of their catchment areas can be evaluated for potential as water supplies. The map also serves as a geographic index to literature on karst groundwater in the area.

Evaluating A Bystander Intervention Program On Reproductive Coercion: Using Quasi-Experimental Design Strategies To Address Methodologic Issues In Randomized Community Prevention Trials, Catherine P. Starnes

Theses and Dissertations--Epidemiology and Biostatistics

Community (or cluster) randomized trials are trials in which communities or groups of individuals (clusters) are randomized to receive the intervention of interest. Community randomized trials frequently more closely resemble a natural experiment than a randomized controlled trial (RCT) following intervention allocation. In particular, the effects of non-compliance can pose methodologic challenges in estimating the intervention effect which may require a quasiexperimental approach in order to minimize bias.

The motivating example to illustrate these issues is the Green Dot High School (GDHS) study. The GDHS study was a longitudinal, cluster-randomized controlled trial designed to assess the effectiveness of a bystander …

Use Of Laboratory Geophysical And Geotechnical Investigation Methods To Characterize Gypsum Rich Soils, Raghava A. Bhamidipati

Theses and Dissertations--Civil Engineering

Gypsum rich soils are found in many parts of the world, particularly in arid and semi-arid regions. Most gypsum occurs in the form of evaporites, which are minerals that precipitate out of water due to a high rate of evaporation and a high mineral concentration. Gypsum rich soils make good foundation material under dry conditions but pose major engineering hazards when exposed to water. Gypsum acts as a weak cementing material and has a moderate solubility of about 2.5 g/liter. The dissolution of gypsum causes the soils to undergo unpredictable collapse settlement leading to severe structural damages. The damages incur …

Lithostratigraphic And Geochemical Characterization Of The Upper Pennsylvanian ‘Wolfcamp D’ Shale, Midland Basin (Usa): Implications For Paleoenvironments And Unconventional Petroleum Reserviors, Patrick W. Baldwin

Theses and Dissertations--Earth and Environmental Sciences

An integrated stratigraphic analysis of a ~350 ft drill core from Upton County (Texas) has revealed pervasive variability of several key siliciclastic and carbonate lithofacies in vertical section, where organic-rich siliceous mudrock beds alternate with aluminum-rich mudrocks and calcareous gravity flow deposits. Sediment chemistry, especially major and trace elements derived from x-ray fluorescence, captures this variability with high sensitivity. The high frequency chemostratigraphic variability appears to be cyclic, and it is interpreted to represent the first example of deep-water Late Pennsylvanian cyclothems for the Midland Basin. Positive trace metal (Mo, Cr) correlations to total organic carbon and gamma ray response …