Physical Sciences and Mathematics Commons^™

Water Current, Volume 56, No. 2, Summer 2024

Water Current Newsletter

No abstract provided.

Torus Surgery, Fibrations, Multisections, And Spun 4-Manifolds, Nicholas Paul Meyer

Dissertations and Doctoral Documents from University of Nebraska-Lincoln, 2023–

A compact n-manifold X is fibered if it is a fiber bundle where the fiber F and base space B are manifolds. Fibered manifolds are particularly nice, as they are essentially classified by their monodromy maps. Two common examples of 4-dimensional fibered manifolds are surface bundles over surfaces and 3-manifold bundles over the circle.

The main focus of this dissertation is to investigate fibered 4-manifolds whose boundaries are the 3-torus and how these manifolds glue together to give new closed, fibered 4-manifolds. In particular, suppose W is diffeomorphic to S¹ × E_Y (K) where Y …

Nonlocal Frameworks For Nonlinear Conservation Laws And Advection-Diffusion Processes, Anh Thuong Vo

Dissertations and Doctoral Documents from University of Nebraska-Lincoln, 2023–

Conservation laws are fundamental principles that play an important role in modeling various phenomena in physics, chemistry, and biology. However, their limitations, such as the development of shocks despite smooth initial conditions, are well known. The nonlocal model framework can be used to overcome these challenges. Nonlocal frameworks utilize integral operators that mimic differential operators but also incorporate long-range interactions within a finite horizon. This approach not only allows for non-smooth solutions, but also provides flexibility in modeling different phenomena. This study investigates the convergence of nonlocal divergence operators, defined with a general flux density function, to their classical counterparts. …

Exploring Producers' Willingness To Pay For Ecosystem Services: Three Essays On Soil Health, Location Preferences, And Cover Crop Adoption, Kaouter Essakkat

Dissertations and Doctoral Documents from University of Nebraska-Lincoln, 2023–

This dissertation comprises three essays: one assessing Midwest producers' willingness-to-pay (WTP) for soil health-enhancing ecosystem services (ES), another examining the impact of policy implementation locations on WTP, and a third identifying factors influencing producers' adoption of cover crops (CC).

The first essay pioneers the understanding of agricultural producers’ valuation of soil health-associated ES amid growing concerns of soil degradation due to agricultural intensification. Using a discrete choice experiment, this study assesses producers’ WTP for a policy that incentivizes ES provision, specifically improved water quality, carbon sequestration, and enhanced crop yield. Surveying producers across Iowa, Kansas, and Nebraska, our results show …

A Study Of Electron- And Photon-Induced Dissociative Electron Attachment To Molecules And Within Anion-Molecule Clusters, Mahmudul Hasan

Dissertations and Doctoral Documents from University of Nebraska-Lincoln, 2023–

Dissociative electron attachment (DEA) is a resonant process in which a molecule captures a low-energy electron, forming a transient negative ion (TNI). Subsequently, this unstable TNI fragments into a stable anion and one or more neutral fragments. DEA is crucial in various phenomena, ranging from atmospheric and radiation chemistry to processes occurring in plasmas, and is particularly significant in the context of radiation-induced damage to biological molecules. This study uses different experimental methods to better understand the fragmentation in molecular anions forming through dissociative photoexcitation and electron attachment. We have developed an experimental apparatus for dissociative photoexcitation studies. This apparatus …

Development Of A Rule-Based Monitoring System For Autonomous Heavy Equipment Safety, Amirpooya Shirazi

Department of Construction Engineering and Management: Dissertations, Theses, and Student Research

Roadway construction work zones are constantly exposed to interactions among construction equipment, workers, and vehicles. Furthermore, ensuring safety in these areas is considered a challenging task due to the complexity of the environment. As shown in the rising trend of fatal accidents in roadway work zones, current OSHA regulations in construction safety are insufficient in effectively detecting unsafe situations and mitigating the risks. Furthermore, best practices, such as internal traffic control planning (ITCP), exhibit critical limitations requiring continuous monitoring of active work zones as well as adjustments to the site coordination plans due to the dynamic nature of work zone …

My Ai Companion: An Examination Of The Removal Of Erotic Role Play From Replika Through User Discussion On Reddit, Chelsee M. Allen

Department of Sociology: Dissertations, Theses, and Student Research

The development of artificial intelligence (AI) software has expanded rapidly in recent years, and thus has emerged the importance of exploring human relationships with AI chatbots. Replika, an app which uses AI to mimic human conversation, removed a function called Erotic Role Play (ERP) that allowed for sexual conversation with users’ customizable chatbots in February of 2023. This exploratory qualitative study examines the aftermath of ERP’s removal through an analysis of user interactions on Reddit. Five overarching themes emerged through the analysis of top posts to a Replika-specific subreddit, encompassing topics around mental health, stigma, coping, sex work and gendered …

Production Of The Siderophore Lysochelin In Rich Media Through Maltose-Promoted High-Density Growth Of Lysobacter Sp. 3655, Fang Zhang, Jia Liu, Lin Jiang, Yongbiao Zheng, Lingjun Yu, Liangcheng Du

Chemistry Department: Faculty Publications

Siderophores are produced by bacteria in iron-restricted conditions. However, we found maltose could induce the biosynthesis of the siderophore lysochelin in Lysobacter sp. 3655 in rich media that are not compatible with siderophore production. Maltose markedly promoted cell growth, with over 300% increase in cell density (OD₆₀₀) when LB medium was added with maltose (LBM). While lysochelin was not detectable when OD₆₀₀ in LBM was below 5.0, the siderophore was clearly produced when OD₆₀₀ reached 7.5 and dramatically increased when OD₆₀₀ was 15.0. Coincidently, the transcription of lysochelin biosynthesis genes was remarkably enhanced following the …

Cellmarkerpipe: Cell Marker Identification And Evaluation Pipeline In Single Cell Transcriptomes, Yinglu Jia, Pengchong Ma, Qiuming Yao

School of Computing: Faculty Publications

Assessing marker genes from all cell clusters can be time-consuming and lack systematic strategy. Streamlining this process through a unified computational platform that automates identification and benchmarking will greatly enhance efficiency and ensure a fair evaluation. We therefore developed a novel computational platform, cellMarkerPipe (https:// github. com/ yao- labor atory/ cellM arker Pipe), for automated cell-type specific marker gene identification from scRNA-seq data, coupled with comprehensive evaluation schema. CellMarkerPipe adaptively wraps around a collection of commonly used and state-of-the-art tools, including Seurat, COSG, SC3, SCMarker, COMET, and scGeneFit. From rigorously testing across diverse samples, we ascertain SCMarker’s overall reliable performance …

Topological Regression As An Interpretable And Efficient Tool For Quantitative Structureactivity Relationship Modeling, Ruibo Zhang, Daniel Nolte, Cesar Sanchez-Villalobos, Souparno Ghosh, Ranadip Pal

Department of Statistics: Faculty Publications

Quantitative structure-activity relationship (QSAR)modeling is a powerful tool for drug discovery, yet the lack of interpretability of commonly used QSAR models hinders their application inmolecular design.We propose a similaritybased regression framework, topological regression (TR), that offers a statistically grounded, computationally fast, and interpretable technique to predict drug responses. We compare the predictive performance of TR on 530 ChEMBL human target activity datasets against the predictive performance of deep-learning-based QSAR models. Our results suggest that our sparse TR model can achieve equal, if not better, performance than the deep learningbased QSAR models and provide better intuitive interpretation by extracting an approximate …

Cost Modeling Of Provision C.3 Green Stormwater Infrastructure Requirements For Residential Development In Concord, California, James Henry Mizutani

Department of Civil and Environmental Engineering: Dissertations, Theses, and Student Research

To assist the city of Concord in achieving its housing goals as presented in its general plan, while still meeting the stormwater discharge requirements laid out in the city’s municipal discharge permit, I worked with local developers and consultants to create a spreadsheet modeling tool that allows housing developers to estimate the total cost of green stormwater infrastructure needed to comply with local regulations.

This report contains a summary of the conditions leading to the necessity of this tool, the steps the tool takes that go beyond existing models, a description of how the model operates, instructions on how to …

Nonlinear Classifiers For Wet-Neuromorphic Computing Using Gene Regulatory Neural Network, Adrian Ratwatte, Samitha Somathilaka, Sasitharan Balasubramaniam, Assaf A. Gilad

School of Computing: Faculty Publications

The gene regulatory network (GRN) of biological cells governs a number of key functionalities that enable them to adapt and survive through different environmental conditions. Close observation of the GRN shows that the structure and operational principles resemble an artificial neural network (ANN), which can pave the way for the development of wet-neuromorphic computing systems. Genes are integrated into gene-perceptrons with transcription factors (TFs) as input, where the TF concentration relative to half-maximal RNA concentration and gene product copy number influences transcription and translation via weighted multiplication before undergoing a nonlinear activation function. This process yields protein concentration as the …

Internet-Based Data Platforms Re-Define The Distributions Of Some Large Crabronid Wasps In Arkansas (Hymenoptera: Crabronidae), David E. Bowles

Insecta Mundi

The geographic distributions of three large wasps, Sphecius speciosus (Drury), Stictia carolina Fabricius, and Stizus brevipennis Walsh (Hymenoptera: Crabronidae), occurring in Arkansas are defined using museum specimens and three internet-based data platforms. The internet-based data platforms generally provided more county location records than museum records. Using data from internet sources for easily identified species can better serve to illustrate the known distributions for some species thus making for a powerful tool elucidating distributional patterns and conservation planning.

ZooBank registration. urn:lsid:zoobank.org:pub:DCAE9192-1765-40CD-952B-0A094F413991

Plas 439: Organic Farming And Food Systems Faculty-Led Inquiry Into Reflective Scholarly Teaching Benchmark Portfolio, Christian Stephenson

UNL Faculty Course Portfolios

Organic Farming and Food Systems is a senior and graduate level course for students in the Department of Agronomy and Horticulture. This course was previously offered but has been significantly modified as I have taken on responsibility for the course. Goals for the course include student comprehension of the methods of organic and regenerative farming and the impacts of those methods on economic, environmental, and social sustainability. An additional goal is to build student competency in the evaluation of primary, secondary, and tertiary information resources and critical thinking surrounding issues in food production. Assessment for the course was through diverse …

Morphometric Analysis And Taxonomic Re-Evaluation Of Pepsis Cerberus Lucas And P. Elegans Lepeletier (Hymenoptera: Pompilidae: Pepsinae: Pepsini), Frank E. Kurczewski, Akira Shimizu, Diane H. Kiernan

Insecta Mundi

Hurd (1952) separated Pepsis cerberus Lucas from P. elegans Lepeletier (Hymenoptera: Pompilidae: Pepsinae: Pepsini) based on external morphology and biogeography. Vardy (2005) synonymized the familiar and historically well-documented P. cerberus and P. elegans, combining these Nearctic taxa with several Neotropical variants in an extremely broad definition of P. menechma Lepeletier. In doing so, Vardy (2005) breached the principle of nomenclatural stability. He ignored the prevailing usage and clearly violated articles 23.2, 23.3 and 23.9.1.2 of the ICZN (1999). Morphological differences, ecological divergence, and narrow sympatric geographic distribution of P. cerberus and P. elegans …

What Climate Change Means For Nebraska

United States Environmental Protection Agency: Publications

Nebraska’s climate is changing. In the past century, most of the state has warmed by at least one degree (F). The soil is becoming drier, and rainstorms are becoming more intense. In the coming decades, flooding is likely to increase, yet summers are likely to become increasingly hot and dry, which would reduce yields of some crops, require farmers to use more water, and amplify some risks to human health.

Our climate is changing because the earth is warming. People have increased the amount of carbon dioxide in the air by 40 percent since the late 1700s. Other heat-trapping greenhouse …

Bagging Improves The Performance Of Deep Learning-Based Semantic Segmentation With Limited Labeled Images: A Case Study Of Crop Segmentation For High-Throughput Plant Phenotyping, Yinglun Zhan, Yuzhen Zhou, Geng Bai, Yufeng Ge

Department of Statistics: Faculty Publications

Advancements in imaging, computer vision, and automation have revolutionized various fields, including field-based high-throughput plant phenotyping (FHTPP). This integration allows for the rapid and accurate measurement of plant traits. Deep Convolutional Neural Networks (DCNNs) have emerged as a powerful tool in FHTPP, particularly in crop segmentation—identifying crops from the background—crucial for trait analysis. However, the effectiveness of DCNNs often hinges on the availability of large, labeled datasets, which poses a challenge due to the high cost of labeling. In this study, a deep learning with bagging approach is introduced to enhance crop segmentation using high-resolution RGB images, tested on the …

Theory Of An Automatic Seepage Meter And Ramifications For Applications, V. A. Zlotnik, D. K. Solomon, D. P. Genereux, T. E. Gilmore, C. E. Humphrey, A. R. Mittelstet, A. V. Zlotnik

Conservation and Survey Division

No abstract provided.

Building A Data Pipeline And Machine Learning Model For Insurance Data, Connor Weyers

Honors Theses

Insurance telematics is an emerging and exciting field. It combines the advancements in GPS tracking, computational analytics, data processing, and machine learning into a useful tool to help insurance companies make the best product for their consumers. This is why National Indemnity looked to implement a telematics portion to their business processes of underwriting insurance policies and sponsored a School of Computing Senior Design project. In this report, we will first review existing solutions that been used to solve problems and subproblems similar to that we are given in this project. We then propose designs for the data pipeline and …

The Ring-Closing Reaction Of Cyclopentadiene Probed With Ultrafast X‑Ray Scattering, Lisa Huang, Lauren Bertram, Lingyu Ma, Nathan Goff, Stuart W. Crane, Asami Odate, Thomas Northey, Andrés Moreno Carrascosa, Mats Simmermacher, Sri Bhavya Muvva, Joseph D. Geiser, Matthew J. Lueckheide, Zane Phelps, Mengning Liang, Xinxin Cheng, Ruaridh Forbes, Joseph S. Robinson, Matthew J. Hayes, Felix Allum, Alice E. Green, Kenneth Lopata, Artem Rudenko, Thomas J. A. Wolf, Martin Centurion, Daniel Rolles, Michael P. Minitti, Adam Kirrander, Peter M. Weber

Martin Centurion Publications

The dynamics of cyclopentadiene (CP) following optical excitation at 243 nm was investigated by time-resolved pump−probe X-ray scattering using 16.2 keV X-rays at the Linac Coherent Light Source (LCLS). We present the first ultrafast structural evidence that the reaction leads directly to the formation of bicyclo[2.1.0]pentene (BP), a strained molecule with three- and four-membered rings. The bicyclic compound decays via a thermal backreaction to the vibrationally hot CP with a time constant of 21 ± 3 ps. A minor channel leads to ring-opened structures on a subpicosecond time scale.

Seeing Is Believing: Religious Views, Perceptions Of Pollution, And Environmental Attitudes, Katelynn (Sage) Shadoan

Department of Sociology: Dissertations, Theses, and Student Research

This study explores the intersection of religious beliefs, perceptions of pollution, and environmental attitudes among Americans. Drawing upon Lynn White's seminal argument regarding Christian theology and its implications for environmental stewardship, this research investigates the role of biblical literalism in shaping environmental attitudes, particularly among conservative Christians. Using nationally representative survey data and logistic regression models, the study examines how the perceptions of pollution moderate the effects of views of the Bible on environmental concern. The findings reveal that while perceived pollution exposure is strongly associated with environmental attitudes, it does not moderate the association between biblical literalism and environmental …

Star-Based Reachability Analysis Of Binary Neural Networks On Continuous Input, Mykhailo Ivashchenko

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

Deep Neural Networks (DNNs) have become a popular instrument for solving various real-world problems. DNNs’ sophisticated structure allows them to learn complex representations and features. However, architecture specifics and floating-point number usage result in increased computational operations complexity. For this reason, a more lightweight type of neural networks is widely used when it comes to edge devices, such as microcomputers or microcontrollers – Binary Neural Networks (BNNs). Like other DNNs, BNNs are vulnerable to adversarial attacks; even a small perturbation to the input set may lead to an errant output. Unfortunately, only a few approaches have been proposed for verifying …

5-Year Strategic Direction, 2024–2028: Institute Of Agriculture And Natural Resources, University Of Nebraska–Lincoln, Institute Of Agriculture And Natural Resources University Of Nebraska-Lincoln

Institute of Agriculture and Natural Resources: Institute Publications

IANR: Integrating Learning, Discovery, and Engagement for an Even Better Nebraska

Includes an introduction, description of the components of the Institute of Agriculture and Natural Resources at the University of Nebraska–Lincoln, the IANR pillars, stratgeic aims for 2024–2028, and a section on implementation.

Detection Of Deficiencies And Data Analysis Of Bridge Members With Deep Convolutional Neural Networks, Bennett Jackson

Department of Civil and Environmental Engineering: Dissertations, Theses, and Student Research

Concrete cracks and structural steel corrosion are two of the most common defects in bridges. Quantifying and classifying these defects provide bridge inspectors and engineers with valuable data for assessing deterioration levels. However, the bridge inspection process is typically a subjective, time intensive, and tedious task, as defects can be overlooked or in locations not easily accessible. Previous studies have investigated deep learning-based inspection methods, implementing popular models such as Mask R-CNN and U-Net. The architectures of these models offer certain advantages depending on the required task. This thesis aims to evaluate and compare Mask R-CNN and U-Net regarding their …

Understanding The Zonal Variability In Cmip6 Projections Of Sahelian Precipitation, Emmanuel Ogwuche Audu

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

The uncertainty in model projections of future precipitation across the Sahel has persisted across many generations of Earth System Models (ESMs), with some models predicting drying and others moistening across this region. These discrepancies in future projections pose a challenge for stakeholders and decision makers. Many projections of Sahel precipitation found in the ESMs participating in the sixth phase of Coupled Model Intercomparison Project (CMIP6) show a zonal dipole in precipitation trend, with moistening across the Central and Eastern Sahel and drying projected for the Western Sahel. Previous studies have connected precipitation variability across the Sahel to changes in various …

Polarimetric Radar Signatures In Significant Severe Left-Moving Supercells, Raychel Nelson

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Left-moving (LM) supercells, though rarer than right-moving (RM) supercells, may produce significant severe weather. However, there are very few existing studies on LM supercells, particularly polarimetric radar analyses. The upgrade of the nationwide Weather Surveillance Radar-1988 Doppler (WSR-88D) network to polarimetric capability and subsequent studies vastly improved understanding of RM supercells, but similar efforts have largely not been made for LM supercells. This study employs an automated polarimetric radar signature detection algorithm to examine a dataset of significant severe (hail ≥ 2.00”, wind ≥ 65 kts) LM supercells to quantify their polarimetric signatures. Comparisons are made with RM supercells to …

A Compilation, Analysis, And Categorization Of 403 Atmospheric And Climate Science Misconceptions, Haeli Leighty

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

The National Association of Geoscience Teachers (NAGT) has listed the inaccessibility of research related to misconceptions in atmospheric and climate science as a Geoscience Education Research Grand Challenge (Cervato et al. 2018). This project was a direct response to this call for research and consisted of three distinct steps: 1) data gathering, which included reviewing the literature for relevant misconception data, 2) a qualitative analysis, which included compiling, organizing, and categorizing the data collected, and 3) a quantitative analysis, which included determining the prevalence of each misconception across topic categories, demographic categories, and over time. A total of 403 misconceptions …

Effect Of Biomass Water Dynamics In Cosmic-Ray Neutron Sensor Observations: A Long-Term Analysis Of Maize-Soybean Rotation In Nebraska, Tanessa Morris

School of Natural Resources: Dissertations, Theses, and Student Research

The precise measurement of soil water content (SWC) is crucial for effective water resource management. This study utilizes the Cosmic Ray Neutron Sensor (CRNS) for area-averaged SWC measurements, emphasizing the need to consider all hydrogen sources, including the time-variable ones like plant biomass and water content. Chapter 1 presents a background on soil moisture estimation, CRNS technology, and an overview of the study. It discusses various soil moisture measurement techniques, highlights the gap in knowledge addressed by CRNS technology, explains CRNS functionality and advancements, and outlines the study's motivations and methods.

Chapter 2 reports a study conducted near Mead, Nebraska, …

Towards Sustainable Development: Civic Architecture As Material Banks, Kathleen O'Gara

Masters in Architecture Program: Theses

This thesis posed the question, “How can buildings be designed to be disassembled and reused to reduce construction and demolition waste and reduce our unsustainable reliance on raw materials?” Designing for disassembly and reuse has the potential to dramatically increase the life of building materials, thus decreasing construction and demolition waste relating to architecture. When designing with deconstruction and reuse in mind, designers must consider the next life of these materials. The thesis was further narrowed to push the adaptability of these materials by designing a structural kit of parts. The structure system is often seen as a stable and …

Public Horticulture: Process And Design Of The Lincoln Botanical Garden, Brad Kindler

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Beginning in 2012, the local non-profit, The Lincoln Botanical Garden, began organizing the conceptual design and creation of a glass conservatory within a botanical garden in Lincoln, Nebraska. These proposed urban enhancements seek to fill a gap in garden amenities in the city by providing year-round access to public horticulture programming and education.

This project, Public Horticulture: Process and Design of the Lincoln Botanical Garden, documents these efforts and makes design recommendations for a themed Glacial Erratic Garden that could be constructed within the botanical garden.

Advisors: Ellen Paparozzi and Sam Wortman