Physical Sciences and Mathematics Commons^™

Permafrost Landscape History Shapes Fluvial Chemistry, Ecosystem Carbon Balance, And Potential Trajectories Of Future Change, Scott Zolkos, Suzanne E. Tank, Steven V. Kokelj, Robert G. Striegl, Sarah Shakil, Carolina Voigt, Oliver Sonnentag, William L. Quinton, Edward A.G. Schuur, Donatella Zona, Peter M. Lafleur, Ryan C. Sullivan, Masahito Ueyama, David Billesbach, David Cook, Elyn R. Humphreys, Philip Marsh

Daugherty Water for Food Global Institute: Faculty Publications

Intensifying permafrost thaw alters carbon cycling by mobilizing large amounts of terrestrial substrate into aquatic ecosystems. Yet, few studies have measured aquatic carbon fluxes and constrained drivers of ecosystem carbon balance across heterogeneous Arctic landscapes. Here, we characterized hydrochemical and landscape controls on fluvial carbon cycling, quantified fluvial carbon fluxes, and estimated fluvial contributions to ecosystem carbon balance across 33 watersheds in four ecoregions in the continuous permafrost zone of the western Canadian Arctic: unglaciated uplands, ice-rich moraine, and organic-rich lowlands and till plains. Major ions, stable isotopes, and carbon speciation and fluxes revealed patterns in carbon cycling across ecoregions …

Combining Phenotypic And Genomic Data To Improve Prediction Of Binary Traits, Diego Jarquin, Arkaprava Roy, Bertrand S. Clarke, Subhashis Ghosal

Department of Statistics: Faculty Publications

Plant breeders want to develop cultivars that outperform existing genotypes. Some characteristics (here ‘main traits’) of these cultivars are categorical and difficult to measure directly. It is important to predict the main trait of newly developed genotypes accurately. In addition to marker data, breeding programs often have information on secondary traits (or ‘phenotypes’) that are easy to measure. Our goal is to improve prediction of main traits with interpretable relations by combining the two data types using variable selection techniques. However, the genomic characteristics can overwhelm the set of secondary traits, so a standard technique may fail to select any …

Computing Rational Powers Of Monomial Ideals, Pratik Dongre, Benjamin Drabkin, Josiah Lim, Ethan Partida, Ethan Roy, Dylan Ruff, Alexandra Seceleanu, Tingting Tang

Department of Mathematics: Faculty Publications

This paper concerns fractional powers of monomial ideals. Rational powers of a monomial ideal generalize the integral closure operation as well as recover the family of symbolic powers. They also highlight many interesting connections to the theory of convex polytopes. We provide multiple algorithms for computing the rational powers of a monomial ideal. We also introduce a mild generalization allowing real powers of monomial ideals. An important result is that given any monomial ideal I, the function taking a real number to the corresponding real power of I is a step function which is left continuous and has rational …

Using Electrochemical Oxidation To Remove Pfas In Simulated Investigation-Derivedwaste (Idw): Laboratory And Pilot-Scale Experiments, Amy Yanagida, Elise Webb, Clifford E. Harris, Mark Christenson, Steven Comfort

School of Natural Resources: Faculty Publications

Repeated use of aqueous firefighting foams at military aircraft training centers has contaminated groundwater with per and polyfluorinated alkyl substances (PFAS). To delineate the extent of PFAS contamination, numerous site investigations have occurred, which have generated large quantities of investigation-derived wastes (IDW). The commonly used treatment of incinerating PFAS-tainted IDW is costly, and was recently suspended by the Department of Defense. Given long-term IDW storage in warehouses is not sustainable, our objective was to use electrochemical oxidation to degrade PFAS in contaminated water and then scale the technology toward IDW treatment. This was accomplished by conducting a series of laboratory …

Flint Michigan Drinking Water Crisis, J. David Aiken

Cornhusker Economics

Briefly covers the Flint, Michigan drinking water crisis including providing some background, a timeline of events, and key takeaways from the perspective of public policy.

This article was originally prepared for distribution to students in Aiken's AECN 357 environmental and natural resources law course.

Ai Protein Structure Prediction-Based Modeling And Mutagenesis Of A Protostome Receptor And Peptide Ligands Reveal Key Residues For Their Interaction, Shi-Qi Guo, Ya-Dong Li, Ping Chen, Guo Zhang, Hui-Ying Wang, Hui-Min Jiang, Wei-Jia Liu, Ju-Ping Xu, Xue-Ying Ding, Ping Fu, Ke Yu, Hai-Bo Zhou, James W. Checco, Jian Jing

Chemistry Department: Faculty Publications

The protostome leucokinin (LK) signaling system, including LK peptides and their G protein-coupled receptors, has been characterized in several species. Despite the progress, molecular mechanisms governing LK peptide–receptor interactions remain to be elucidated. Previously, we identified a precursor protein for Aplysia leucokinin-like peptides (ALKs) that contains the greatest number of amidated peptides among LK precursors in all species identified so far. Here, we identified the first ALK receptor from Aplysia, ALKR. We used cell-based IP1 activation assays to demonstrate that two ALK peptides with the most copies, ALK1 and ALK2, activated ALKR with high potencies. Other endogenous ALK-derived peptides …

Divergent Neural And Endocrine Responses In Wild-Caught And Laboratory-Bred Rattus Norvegicus, Joanna Jacob, Sally Watanabe, Jonathan Richardson, Nick Gonzales, Emily Ploppert, Garet Lahvis, Aaron Shiels, Sadie Wenger, Kelly Saverino, Janhavi Bhalerao, Brendan Crockett, Erin Burns, Olivia Harding, Krista Fischer-Stenger, Kelly Lambert

United States Department of Agriculture Wildlife Services: Staff Publications

Although rodents have represented the most intensely studied animals in neurobiological investigations for more than a century, few studies have systematically compared neural and endocrine differences between wild rodents in their natural habitats and laboratory strains raised in traditional laboratory environments. In the current study, male and female Rattus norvegicus rats were trapped in an urban setting and compared to weight-and sex-matched conspecifics living in standard laboratory housing conditions. Brains were extracted for neural assessments and fecal boli were collected for endocrine [corticosterone and dehydroepiandrosterone (DHEA)] assays. Additionally, given their role in immune and stress functions, spleen and adrenal weights …

Girls In Stem! Elementary Afterschool Six-Week Curriculum, Jess Li, Samavi Rafique

Honors Expanded Learning Clubs

No abstract provided.

Collateral Damage From Agricultural Netting To Open-Country Bird Populations In Thailand, Rongrong Angkaew, Philip D. Round, Dusit Ngoprasert, Larkin A. Powell

School of Natural Resources: Faculty Publications

Nets are used across a wide variety of food production landscapes to control avian pests typically resulting in deaths of entangled birds. However, the impact of nets on bird populations is a human–wildlife conflict that remains mostly unquantified. Here, we examined the scale of netting in the central plains of Thailand, a region dominated by ricefields, among which aquaculture ponds are increasingly interspersed. Nets/exclusion types, number of individual birds and species caught were recorded on 1312 road-survey transects (2-km length × 0.4-km width). We also interviewed 104 local farmers. The transect sampling took place in late- September 2020, and from …

Duality For Asymptotic Invariants Of Graded Families, Michael Dipasquale, Thái Thành Nguyễn, Alexandra Seceleanu

Department of Mathematics: Faculty Publications

The starting point of this paper is a duality for sequences of natural numbers which, under mild hypotheses, interchanges subadditive and superadditive sequences and inverts their asymptotic growth constants.

We are motivated to explore this sequence duality since it arises naturally in at least two important algebraic-geometric contexts. The first context is Macaulay- Matlis duality, where the sequence of initial degrees of the family of symbolic powers of a radical ideal is dual to the sequence of Castelnuovo-Mumford regularity values of a quotient by ideals generated by powers of linear forms. This philosophy is drawn from an influential paper of …

Enabling Intelligent Iots For Histopathology Image Analysis Using Convolutional Neural Networks, Mohammed H. Alali, Arman Roohi, Shaahin Angizi, Jitender S. Deogun

School of Computing: Faculty Publications

Medical imaging is an essential data source that has been leveraged worldwide in healthcare systems. In pathology, histopathology images are used for cancer diagnosis, whereas these images are very complex and their analyses by pathologists require large amounts of time and effort. On the other hand, although convolutional neural networks (CNNs) have produced near-human results in image processing tasks, their processing time is becoming longer and they need higher computational power. In this paper, we implement a quantized ResNet model on two histopathology image datasets to optimize the inference power consumption. We analyze classification accuracy, energy estimation, and hardware utilization …

Seasonality Of Precipitation In The Southwestern United States During The Late Pleistocene Inferred From Stable Isotopes In Herbivore Tooth Enamel, Matthew J. Kohn, Kathleen B. Springer, Jeffrey S. Pigati, Linda M. Reynard, Amanda E. Drewicz, Justin Crevier, Eric Scott

United States Geological Survey: Staff Publications

The late Pleistocene was a climatically dynamic period, with abrupt shifts between cool-wet and warmdry conditions. Increased effective precipitation supported large pluvial lakes and long-lived spring ecosystems in valleys and basins throughout the western and southwestern U.S., but the source and seasonality of the increased precipitation are debated. Increases in the proportions of C₄/(C₄+ C₃) grasses in the diets of large grazers have been ascribed both to increases in summer precipitation and lower atmospheric CO₂ levels. Here we present stable carbon and oxygen isotope data from tooth enamel of late Pleistocene herbivores recovered …

Effects Of Spatially Heterogeneous Lakeside Development On Nearshore Biotic Communities In A Large, Deep, Oligotrophic Lake, Michael F. Meyer, Ted Ozersky, Kara H. Woo, Kirill Shchapov, Aaron W. E. Galloway, Julie B. Schram, Emma J. Rosi, Daniel D. Snow, Maxim A. Timofeyev, Dmitry Yu. Karnaukhov, Matthew R. Brousil, Stephanie E. Hampton

School of Natural Resources: Faculty Publications

Sewage released from lakeside development can reshape ecological communities. Nearshore periphyton can rapidly assimilate sewage-associated nutrients, leading to increases of filamentous algal abundance, thus altering both food abundance and quality for grazers. In Lake Baikal, a large, ultra-oligotrophic, remote lake in Siberia, filamentous algal abundance has increased near lakeside developments, and localized sewage input is the suspected cause. These shifts are of particular interest in Lake Baikal, where endemic littoral biodiversity is high, lakeside settlements are mostly small, tourism is relatively high (~1.2 million visitors annually), and settlements are separated by large tracts of undisturbed shoreline, enabling investigation of heterogeneity …

Meta-Analysis Reveals Both The Promises And The Challenges Of Clinical Metabolomics, Heidi E. Roth, Robert Powers

Chemistry Department: Faculty Publications

Clinical metabolomics is a rapidly expanding field focused on identifying molecular biomarkers to aid in the efficient diagnosis and treatment of human diseases. Variations in study design, metabolomics methodologies, and investigator protocols raise serious concerns about the accuracy and reproducibility of these potential biomarkers. The explosive growth of the field has led to the recent availability of numerous replicate clinical studies, which permits an evaluation of the consistency of biomarkers identified across multiple metabolomics projects. Pancreatic ductal adenocarcinoma (PDAC) is the third-leading cause of cancer-related death and has the lowest five-year survival rate primarily due to the lack of an …

Collateral Damage: Anticoagulant Rodenticides Pose Threats To California Condors, Garth Herring, Collin A. Eagles-Smith, Rachel Wolstenholme, Alacia Welch, Chris West, Barnett A. Rattner

United States Geological Survey: Staff Publications

Anticoagulant rodenticides (ARs) are widespread environmental contaminants that pose risks to scavenging birds because they routinely occur within their prey and can cause secondary poisoning. However, little is known about AR exposure in one of the rarest avian scavengers in the world, the California condor (Gymnogyps californianus). We assessed AR exposure in California condors and surrogate turkey vultures (Cathartes aura) to gauge potential hazard to a proposed future condor flock by determining how application rate and environmental factors influence exposure. Additionally, we examined whether ARs might be correlated with prolonged blood clotting time and potential mortality …

Experimental Infection Of Brazilian Free-Tailed Bats (Tadarida Brasiliensis) With Two Strains Of Sars-Cov-2, Angela M. Bosco-Lauth, Stephanie M. Porter, Karen A. Fox, Mary E. Wood, Daniel Neubaum, Marissa Quilici

United States Department of Agriculture Wildlife Services: Staff Publications

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is presumed to have originated from wildlife and shares homology with other bat coronaviruses. Determining the susceptibility of North American bat species to SARS-CoV-2 is of utmost importance for making decisions regarding wildlife management, public health, and conservation. In this study, Brazilian free-tailed bats (Tadarida brasiliensis) were experimentally infected with two strains of SARS-CoV-2 (parental WA01 and Delta variant), evaluated for clinical disease, sampled for viral shedding and antibody production, and analyzed for pathology. None of the bats (n = 18) developed clinical disease associated with infection, shed infectious virus, or …

Limited Rigor In Studies Of Raptor Mortality And Mitigation At Wind Power Facilities, Tara J. Conkling, Christopher J.W. Mcclure, Sandra Cuadros, Scott R. Loss, Todd E. Katzner

United States Geological Survey: Staff Publications

Wind power is an expanding source of renewable energy. However, there are ecological challenges related to wind energy generation, including collisions of wildlife with turbines. Lack of rigor, and variation in study design, together limit efforts to understand the broad-scale effects of wind power infrastructure on wildlife populations. It is not clear, however, whether these types of limitations apply to groups of birds such as raptors that are particularly vulnerable to negative effects of wind energy. We reviewed 672 peer-reviewed publications, unpublished reports, and citations from 321 wind facilities in 12 countries to evaluate methods used to monitor and mitigate …

Long-Term Effect Of A Gnrh-Based Immunocontraceptive On Feral Cattle In Hong Kong, Rebecca Pinkham, Ka-Kei Koon, Jason To, Jason Chan, Flavie Vial, Matt Gomm, Douglas C. Eckery, Giovanna Massei

United States Department of Agriculture Wildlife Services: Staff Publications

Increasing human-wildlife conflicts worldwide are driving the need for multiple solutions to reducing “problem” wildlife and their impacts. Fertility control is advocated as a non-lethal tool to manage free-living wildlife and in particular to control iconic species. Injectable immunocontraceptives, such as GonaCon, stimulate the immune system to produce antibodies against the gonadotrophin-releasing hormone (GnRH), which in turn affects the release of reproductive hormones in mammals. Feral cattle (Bos indicus or Bos taurus) in Hong Kong are an iconic species whose numbers and impacts on human activities have increased over the last decade. Previous studies have proven that a …

Long-Term Effect Of A Gnrh-Based Immunocontraceptive On Feral Cattle In Hong Kong, Rebecca Pinkham, Ka-Kei Koon, Jason To, Jason Chan, Flavie Vial, Matt Gomm, Douglas C. Eckery, Giovanna Massei

United States Department of Agriculture Wildlife Services: Staff Publications

Increasing human-wildlife conflicts worldwide are driving the need for multiple solutions to reducing “problem” wildlife and their impacts. Fertility control is advocated as a non-lethal tool to manage free-living wildlife and in particular to control iconic species. Injectable immunocontraceptives, such as GonaCon, stimulate the immune system to produce antibodies against the gonadotrophin-releasing hormone (GnRH), which in turn affects the release of reproductive hormones in mammals. Feral cattle (Bos indicus or Bos taurus) in Hong Kong are an iconic species whose numbers and impacts on human activities have increased over the last decade. Previous studies have proven that a …

Evaluating The Sensitivity Of Heatwave Definitions Among North Carolina Physiographic Regions, Jagadeesh Puvvula, Azar M Abadi, Kathryn C. Conlon, Jared J. Rennie, Hunter Jones, Jesse E. Bell

School of Natural Resources: Faculty Publications

Exposure to extreme heat is a known risk factor that is associated with increased heat-related illness (HRI) outcomes. The relevance of heat wave definitions (HWDs) could change across health conditions and geographies due to the heterogenous climate profile. This study compared the sensitivity of 28 HWDs associated with HRI emergency department visits over five summer seasons (2011–2016), stratified by two physiographic regions (Coastal and Piedmont) in North Carolina. The HRI rate ratios associated with heat waves were estimated using the generalized linear regression framework assuming a negative binomial distribution. We compared the Akaike Information Criterion (AIC) values across the HWDs …

Joint Association Between Ambient Air Pollutant Mixture And Pediatric Asthma Exacerbations, Jagadeesh Puvvula, Jill A. Poole, Sandra Gonzalez, Eleanor G. Rogan, Yeongjin Gwon, Andrew C. Rorie, Linda B. Ford, Jesse E. Bell

School of Natural Resources: Faculty Publications

Background: Exposure to air pollutants is known to exacerbate asthma, with prior studies focused on associations between single pollutant exposure and asthma exacerbations. As air pollutants often exist as a complex mixture, there is a gap in understanding the association between complex air pollutant mixtures and asthma exacerbations. We evaluated the association between the air pollutant mixture (52 pollutants) and pediatric asthma exacerbations.

Method: This study focused on children (age ≤ 19 years) who lived in Douglas County, Nebraska, during 2016–2019. A seasonal- scale joint association between the outdoor air pollutant mixture adjusting for potential confounders (temperature, precipitation, …

Polarization Angle Dependence Of Vertically Propagating Radio-Frequency Signals In South Polar Ice, Davez Bensson, Ilya Kravchenko, Krishna Nivedita

Department of Physics and Astronomy: Faculty Publications

To better understand the effect of ice properties on the science reach of radio experiments designed to measure ultrahigh energy neutrinos (UHEN), we recently considered the timing and amplitude characteristics of radio-frequency (RF) signals propagating along multi-kilometer, primarily horizontal trajectories through cold Polar ice at the South Pole. That analysis indicated satisfactory agreement with a model of ice birefringence based on ice crystal (ĉ-axis) data culled from the South Pole Ice Core Experiment (SPICE). Here we explore the geometrically complementary case of signals propagating along primarily vertical trajectories, using extant data from the Askaryan Radio Array (ARA) experiment, …

Physical Vapor Transport Growth Of Antiferromagnetic Crcl3 Flakes Down To Monolayer Thickness, Jia Wang, Zahra Ahmadi, David Lujan, Jeongheon Choe, Xiaoqin Li, Jeffrey E. Shield, Xia Hong

Department of Physics and Astronomy: Faculty Publications

The van der Waals magnets CrX₃ (X = I, Br, and Cl) exhibit highly tunable magnetic properties and are promising candidates for developing novel two-dimensional (2D) magnetic devices such as magnetic tunnel junctions and spin tunneling transistors. Previous studies of CrCl₃ have mainly focused on mechanically exfoliated samples. Controlled synthesis of high quality atomically thin flakes is critical for their technological implementation but has not been achieved to date. Here, we report the growth of large CrCl3 flakes with well-defined facets down to monolayer thickness (~0.6 nm) via the physical vapor transport technique. Long stripes of tri-layer samples …

Lorentzian Polynomials, Higher Hessians, And The Hodge-Riemann Property For Codimension Two Graded Artinian Gorenstein Algebras, Pedro Macias-Marques, Chris Mcdaniel, Alexandra Seceleanu, Junzo Watanabe

Department of Mathematics: Faculty Publications

We study the Hodge-Riemann property (HRP) for graded Artinian Gorenstein (AG) algebras. We classify AG algebras in codimension two that have HRP in terms of higher Hessian matrices and positivity of Schur functions associated to certain rectangular partitions.

In this paper we introduce the Hodge Riemann property (HRP) on an arbitrary graded oriented Artinian Gorenstein (AG) algebra defined over R, and we give a criterion on the higher Hessian matrix of its Macaulay dual generator (Theorem 3.1). AG algebras can be regarded as algebraic analogues of cohomology rings (in even degrees) of complex manifolds, and the HRP is analogous to …

Biotic And Paleoceanographic Changes Across The Late Cretaceous Oceanic Anoxic Event 2 In The Southern High Latitudes (Iodp Sites U1513 And U1516, Se Indian Ocean), Maria Rose Petrizzo, Giulia Amaglio, David K. Watkins, Kenneth G. Macleod, Brian T. Huber, Takashi Hasegawa, Erik Wolfgring

Department of Earth and Atmospheric Sciences: Faculty Publications

Oceanic Anoxic Event 2, spanning the Cenomanian/Turonian boundary (93.9 Ma), was an episode of major perturbations in the global carbon cycle. To investigate the response of biota and the paleoceanographic conditions across this event, we present data from International Ocean Discovery Program sites U1513 and U1516 in the Mentelle Basin (offshore SW Australia; paleolatitude 59°–60°S in the mid-Cretaceous) that register the first complete records of OAE 2 at southern high latitudes. Calcareous nannofossils provide a reliable bio-chronostratigraphic framework. The distribution and abundance patterns of planktonic and benthic foraminifera, radiolaria, and calcispheres permit interpretation of the dynamics of the water mass …

Bacterial Diseases Of Tilapia, Their Zoonotic Potential And Risk Of Antimicrobial Resistance, Olga L. M. Haenen, Ha Thanh Dong, Truong Dinh Hoai, Margaret Crumlish, Iddya Karunasagar, Timothy Barkham, Swaine L. Chen, Ruth Zadoks, Andreas Kiermeier, Bing Wang, Esther Garrido Gamarro, Masami Takeuchi, Mohammad Noor Amal Azma, Belén Fouz, Southeast Asian Fisheries Development Center, Zeng Wei Wei, Melba G. Bondad-Reantaso

School of Natural Resources: Faculty Publications

Tilapia culture is an important source of income and nutrition to many rural families. Since 2000, the production of tilapia increased and reached domestic and global markets. Major farmed species is Nile tilapia (Oreochromis niloticus), in earthen ponds and cage cultures. Intensification contributed to global tilapia disease outbreaks, with bacterial infections causing mortalities and morbidities, threatening sustainable production. At tilapia farms, high nutrient concentrations, water temperature and fish densities enhance bacterial growth including virulent bacterial clones and potential zoonotic bacteria. Global warming favours this. This review respectively provides a comprehensive overview of the most common and emerging bacterial …

Polynomial Growth Of Betti Sequences Over Local Rings, Luchezar L. Avramov, Alexandra Seceleanu, Zheng Yang

Department of Mathematics: Faculty Publications

We study sequences of Betti numbers (β^R_i (M)) of finite modules M over a complete intersection local ring, R. It is known that for every M the subsequence with even, respectively, odd indices i is eventually given by some polynomial in i. We prove that these polynomials agree for all R-modules if the ideal I^☐ generated by the quadratic relations of the associated graded ring of R satisfies height I^☐ ≥ codim R − 1, and that the converse holds when R is homogeneous and when codim R ≤ 4. Avramov, …

Editorial: Expansion Of The Genetic Code: Unnatural Amino Acids And Their Applications, Subhendu Sekhar Bag, Ishu Saraogi, Jiantao Guo

Chemistry Department: Faculty Publications

No abstract provided.

Low-Gain Integral Control For A Class Of Discrete-Time Lur’E Systems With Applications To Sampled-Data Control, Chris Guiver, Richard Rebarber, Stuart Townley

Department of Mathematics: Faculty Publications

We study low-gain (P)roportional (I)ntegral control of multivariate discrete-time, forced Lur’e systems to solve the output-tracking problem for constant reference signals. We formulate an incremental sector condition which is sufficient for a usual linear low-gain PI controller to achieve exponential disturbance-to-state and disturbance-to-tracking-error stability in closed-loop, for all sufficiently small integrator gains. Output tracking is achieved in the absence of exogenous disturbance (noise) terms. Our line of argument invokes a recent circle criterion for exponential incremental input-to-state stability. The discrete-time theory facilitates a similar result for a continuous-time forced Lur’e system in feedback with sampled-data low-gain integral control. The theory …

Magnetic Skyrmions Unwrapped, Alexey Kovalev

Alexey Kovalev Papers

Experiments with chiral magnets may hold the key to a better understanding of fundamental aspects of transformations between different skyrmionic states, necessary for magnetic memory and logic applications to become a reality.

With the aim of developing computing devices that operate with low power dissipation, scientists have been pursuing the idea of encoding information in magnetic states. Specifically, skyrmions, which can be thought of as whirl-like states of magnetic moments, are promising candidates for this purpose. The advantage of skyrmions lies in their topological protection, a property implying that only a ‘global’ system modification can erase a skyrmion. Realizations of …