Physical Sciences and Mathematics Commons^™

Increasing 18f-Fdg Pet/Ct Capabilities In Radiotherapy For Lung And Esophageal Cancer Via Image Feature Analysis, Jasmine Alexandria Oliver

USF Tampa Graduate Theses and Dissertations

Positron Emission Tomography (PET) is an imaging modality that has become increasingly beneficial in Radiotherapy by improving treatment planning (1). PET reveals tumor volumes that are not well visualized on computed tomography CT or MRI, recognizes metastatic disease, and assesses radiotherapy treatment (1). It also reveals areas of the tumor that are more radiosensitive allowing for dose painting - a non-homogenous dose treatment across the tumor (1). However, PET is not without limitations. The quantitative unit of PET images, the Standardized Uptake Value (SUV), is affected by many factors such as reconstruction algorithm, patient weight, and tracer uptake time (2). …

Novel Techniques In Chemical Ecology To Examine Life Histories In Fishes, Orian Tzadik

USF Tampa Graduate Theses and Dissertations

Diet and movements in fishes are often logistically challenging to study. Trace element and stable isotope analyses have advanced these fields considerably, but are still constrained by methodological impediments, such as the tendency towards lethal sampling. Studying endangered fishes is particularly challenging as representative samples are difficult to obtain. However, the information gained from such studies is often critical to the recovery of endangered fishes as knowledge of life history attributes has the potential to greatly influence the success of management strategies.

I tested the viability of using fin rays in fishes as a non-lethal approach to study diet and …

Acropora Habitat Evaluation And Restoration Site Selection Using A Species Distribution Modeling Approach, Katherine Wirt Ames

USF Tampa Graduate Theses and Dissertations

While populations of nearly all stony coral species along the Florida reef tract have exhibited decline, the most notable decline has occurred in the once-dominant acroporid species (Acropora cervicornis, A. palmata). Both species were listed in 2006 as threatened under the Endangered Species Act. This listing, combined with their continued decline, has resulted in large-scale restoration efforts throughout Florida and the Western Caribbean. Currently, there is little to no information regarding spatial prioritization of sites for these restoration efforts. The primary objective of this dissertation was to utilize species distribution modeling, informed by existing data from the …

Modeling And Survival Analysis Of Breast Cancer: A Statistical, Artificial Neural Network, And Decision Tree Approach, Venkateswara Rao Mudunuru

USF Tampa Graduate Theses and Dissertations

Survival analysis today is widely implemented in the fields of medical and biological sciences, social sciences, econometrics, and engineering. The basic principle behind the survival analysis implies to a statistical approach designed to take into account the amount of time utilized for a study period, or the study of time between entry into observation and a subsequent event. The event of interest pertains to death and the analysis consists of following the subject until death. Events or outcomes are defined by a transition from one discrete state to another at an instantaneous moment in time. In the recent years, research …

Optimizing Protocols For Carbohydrate Nmr Chemical Shift Computations, Michael Trent Kemp

USF Tampa Graduate Theses and Dissertations

The spectroscopic analysis of cellulose is experimentally challenging while computationally accessible with recent developments in NMR code. However, prior to using density functional theory to calculate the NMR chemical shifts of cellulose, smaller, sugar-like molecule systems need to be benchmarked against experimental values. The quantum mechanical / molecular mechanical (QM/MM) calculations presented herein utilize six test systems: ethanol, pyridine, pyrrolidine, pyrrole, myo-inositol and scyllo-inositol in conjunction with the reference tetramethylsilane used to scale the calculated isotropic shielding tensors to relative chemical shifts. The effect of solvent on calculated NMR chemical shifts has also been investigated with regard to quantity of …

Glycine N-Acyltransferase-Like 3 Is Responsible For Long-Chain N-Acylglycine Formation In N18Tg2 Cells, Kristen A Jeffries, Daniel R Dempsey, Emma K Farrell, Ryan L Anderson, Gabrielle J Garbade, Tatyana S Gurina, Imran Gruhonjic, Carly A Gunderson, David J Merkler

Chemistry Faculty Publications

Long-chain fatty acid amides are signaling lipids found in mammals and other organisms; however, details of the metabolic pathways for the N-acylglycines and primary fatty acid amides (PFAMs) have remained elusive. Heavy-labeled precursor and subtraction lipidomic experiments in mouse neuroblastoma N18TG2 cells, a model cell line for the study of fatty acid amide metabolism, establish the biosynthetic pathways for the N-acylglycines and the PFAMs. We provide evidence that the N-acylglycines are formed by a long-chain specific glycine-conjugating enzyme, glycine N-acyltransferase-like 3 (GLYATL3). siRNA knockdown of GLYATL3 in the N18TG2 cells resulted in a decrease in the levels of the N-acylglycines …

Adoption Of The Sawyer Water Filter In Peru, Stephanie D. Paredes

USF Tampa Graduate Theses and Dissertations

In Peru, lack of water, sanitation, and hygiene (WASH) results in 6,600 deaths per year that represents approximately 3.9% of total deaths. Three thousand and nine hundred of these deaths were due to diarrheal diseases (Prüss-Üstün et al., 2008). Systematic reviews suggest that interventions to improve microbial quality of drinking water are successful in reducing diarrheal diseases (Fewtrell et al., 2005; Clasen et al., 2007; Fry et al., 2013). Interventions for household water treatment and safe storage to ensure safe drinking water reduce diarrhea by 31-52% (WHO/UNICEF, 2013).

The SAWYER PointONE filter, a portable and adaptable membrane filtration device as …

A Study On The Effect Of Non – Asthmatic Atopy On Pregnancy Outcomes, Ayesha Johnson

USF Tampa Graduate Theses and Dissertations

Objectives – To measure the effect of non – asthmatic atopy (NAA) on the risk of adverse pregnancy outcomes; low birth weight (LBW), small for gestational age (SGA) and preterm birth (PTB), among primiparous women 19 – 25 years of age.

Methods – Vital Statistics records from births occurring between 2004 and 2014, from approximately 60,000 primiparous women in South Carolina, aged 19 to 25 years, were linked to their Medicaid records. Maternal records were examined to determine if they had a previous diagnosis of NAA. Women with a diagnosis of NAA were frequency matched with a ratio of 1:4 …

Investigating The Determinants Of Recycling Behavior In Youth By Using Theory Of Planned Behavior., Tejaswini Gadiraju

USF Tampa Graduate Theses and Dissertations

The aim of this study is to understand the determinants that influence the youth recycling behavior intention. In other words, this study wants to know the motivations and barriers behind university students’ recycling behavior. The Theory of Planned Behavior (TPB), which provides a theoretical framework for systematically identifying the determinants of recycling behavior, is the basis for this study. Along with the TPB variables, additional predictor variables (moral norm, past experience, knowledge of how and what to recycle, knowledge of consequences, and inconvenience) that can influence behavior intentions were tested in the study. Online survey was used to collect the …

Conversion Of Landfill Gas To Liquid Hydrocarbon Fuels: Design And Feasibility Study, Ryan Alexander Kent

USF Tampa Graduate Theses and Dissertations

This paper will discuss the conversion of gas produced from biomass into liquid fuel through the combination of naturally occurring processes, which occur in landfills and anaerobic digesters, and a gas-to-liquids (GTL) facility. Landfills and anaerobic digesters produce gases (LFG) that can be converted into syngas via a Tri-reforming process and then synthesized into man-made hydrocarbon mixtures using Fischer-Tropsch synthesis. Further processing allows for the separation into liquid hydrocarbon fuels such as diesel and gasoline, as well as other middle distillate fuels. Conversion of landfill gas into liquid fuels increases their energy density, ease of storage, and open market potential …

Generalized Phase Retrieval: Isometries In Vector Spaces, Josiah Park

USF Tampa Graduate Theses and Dissertations

In this thesis we generalize the problem of phase retrieval of vector to that of multi-vector. The identification of the multi-vector is done up to some special classes of isometries in the space. We give some upper and lower estimates on the minimal number of multi-linear operators needed for the retrieval. The results are preliminary and far from sharp.

Comparison Of Urinary Pahs Among Firefighters And Asphalt Pavers, Theodore Aquino

USF Tampa Graduate Theses and Dissertations

Firefighters and asphalt pavers are exposed to polycyclic aromatic hydrocarbons (PAHs) during various work activities. The purpose of this study was to evaluate urinary PAH levels and compare these bio-monitoring levels among firefighters, asphalt pavers, and non-occupationally exposed individuals. The National Institute of Standards and Technology (NIST) urinary PAH levels were used for non-occupationally exposed controls. When compared to the NIST standard for smokers and non-smokers, firefighters demonstrated statistically significant differences in urinary concentration differences for the following metabolites: 2-OH-fluorene, 3-OH-fluorene and 1-OH-pyrene, which were lower in firefighters than the NIST mean for smokers. 1-OH-phenanthrene, 2-OH-phenanthrene and 3-OH-phenanthrene were higher …

Water Metering In Rural, Piped, Community-Managed Water Systems In The Developing World, Simona Platukyte

USF Tampa Graduate Theses and Dissertations

In the early 1990s, the United Nations (UN) recognized water as a finite resource to the entire ecosystem with an economic value that should be developed and managed based on the participatory approach using the Integrated Water Resource Management (IWRM) strategy. Many studies on water management practices have thus emerged in the developing world. Of particular interest to this work is the management of water through metering, price-setting, and rule enforcement in the rural setting in piped, community-owned water systems. There is very little published information regarding metering, enforcement experiments, and experiences in these systems. This is because metering and …

Resonant Solutions To (3+1)-Dimensional Bilinear Differential Equations, Yue Sun

USF Tampa Graduate Theses and Dissertations

In this thesis, we attempt to obtain a class of generalized bilinear differential equations in (3+1)-dimensions by D_p-operators with p = 5, which have resonant solutions. We construct resonant solutions by using the linear superposition principle and parameterizations of wave numbers and frequencies. We test different values of p in Maple computations, and generate three classes of generalized bilinear differential equations and their resonant solutions when p = 5.

On The Number Of Colors In Quandle Knot Colorings, Jeremy William Kerr

USF Tampa Graduate Theses and Dissertations

A major question in Knot Theory concerns the process of trying to determine when two knots are different. A knot invariant is a quantity (number, polynomial, group, etc.) that does not change by continuous deformation of the knot. One of the simplest invariant of knots is colorability. In this thesis, we study Fox colorings of knots and knots that are colored by linear Alexander quandles. In recent years, there has been an interest in reducing Fox colorings to a minimum number of colors. We prove that any Fox coloring of a 13-colorable knot has a diagram that uses exactly five …

West Florida Shelf Connectivity: An Exploratory Study, Amanda Sue Reinert

USF Tampa Graduate Theses and Dissertations

This Thesis explores the connectiveness of the West Florida Shelf’s various areas of economic and ecological importance by considering five case studies of varying dynamic forcing influences and time. The advection of water about the shelf moves nutrients and has a direct impact on the shelf’s ecology and the determination of whether or not the shelf will be oligotrophic at any given time or location. The case studies are analyzed both quantitatively and qualitatively after quasi-isopycnal particle trajectory calculations are completed for each. The findings support a combination of local and deep-ocean forcing being ideal for the maximum advection and …

Modeling The Construction And Evolution Of Distributed Volcanic Fields On Earth And Mars, Jacob Armstrong Richardson

USF Tampa Graduate Theses and Dissertations

Magmatism is a dominant process on Earth and Mars that has significantly modified and evolved the lithospheres of each planet by delivering magma to shallow depths and to the surface. Two common modes of volcanism are present on both Earth and Mars: central-vent dominated volcanism that creates large edifices from concentrating magma in chambers before eruptions and distributed volcanism that creates many smaller edifices on the surface through the independent ascent of individual magmatic dikes. In regions of distributed volcanism, clusters of volcanoes develop over thousands to millions of years. This dissertation explores the geology of distributed volcanism on Earth …

Modified Yttrium Hydroxide/Mc Nylon Nanocomposites And Scaling Effects In Multilayer Polyethylene Films, Jia Chen

USF Tampa Graduate Theses and Dissertations

In this thesis, monomer casting (MC) nylon was synthesized. MC nylon could replace nonferrous metals in certain applications, including gears, wheels, and other moving parts. However, compared with metals, MC nylon products have poor strength and stiffness, and crack easily, especially at low temperatures. In addition, the dimensional stability of MC nylon is poor, especially in the large casting nylon products, causing significant internal stresses due to shrinkage. Thus, MC nylon cracks easily when cast and molded. The yttrium hydroxide particles were modified by stearic acid and dispersed in the caprolactam. The polymerization time was short due to fast anionic …

Characterization Of Bacterial Diversity In Cold-Water Anthothelidae Corals, Stephanie Nichole Lawler

USF Tampa Graduate Theses and Dissertations

Cold-water corals, similar to tropical corals, contain a diverse and complex microbial landscape. Comprised of vital microscopic organisms (i.e. bacteria, viruses, archaea), the coral microbiome is a driving factor in the proliferation and survival of the coral host. Bacteria provide essential biological functions within coral holobionts, facilitating increased nutrient utilization and production of antimicrobial compounds. To date, few cold-water octocoral species have been analyzed to explore the diversity and abundance of their microbial associates. For this study, 23 samples of the family Anthothelidae were collected from Norfolk (n = 12) and Baltimore Canyons (n = 11) from the western Atlantic …

Exciton Dynamics And Many Body Interactions In Layered Semiconducting Materials Revealed With Non-Linear Coherent Spectroscopy, Prasenjit Dey

USF Tampa Graduate Theses and Dissertations

Atomically thin, semiconducting transition metal dichalogenides (TMDs), a special class of layered semiconductors, that can be shaped as a perfect two dimensional material, have garnered a lot of attention owing to their fascinating electronic properties which are achievable at the extreme nanoscale. In contrast to graphene, the most celebrated two-dimensional (2D) material thus far; TMDs exhibit a direct band gap in the monolayer regime. The presence of a non-zero bandgap along with the broken inversion symmetry in the monolayer limit brands semiconducting TMDs as the perfect candidate for future optoelectronic and valleytronics-based device application. These remarkable discoveries demand exploration of …

Modeling The Extent Of Virus Removal In Waste Stabilization Ponds To Support Reuse Of Wastewater, Kelly James Vannoy

USF Tampa Graduate Theses and Dissertations

Waste stabilization ponds (WSPs) are one of the most prevalent types of domestic wastewater treatment technologies employed worldwide, and global stressors such as urbanization, population growth, climate change, and water scarcity have increased the demand for reusing treated wastewater. The safe reuse of treated wastewater in agriculture can ease water scarcity, aid in food production, and reduce environmental degradation from the discharge of wastewater effluent to surface waters. The ability to predict virus concentrations in wastewater effluent is an important criterion for determining whether wastewater is suitable for discharge to the environment or for reuse in agriculture. However, many uncertainties …

Signal Enhanced Holographic Fluorescence Microscopy With Guide-Star Reconstruction, Changwon Jang, David C. Clark, Jonghyun Kim, Byoungho Lee, Myung K. Kim

Physics Faculty Publications

We propose a signal enhanced guide-star reconstruction method for holographic fluorescence microscopy. In the late 00’s, incoherent digital holography started to be vigorously studied by several groups to overcome the limitations of conventional digital holography. The basic concept of incoherent digital holography is to acquire the complex hologram from incoherent light by utilizing temporal coherency of a spatially incoherent light source. The advent of incoherent digital holography opened new possibility of holographic fluorescence microscopy (HFM), which was difficult to achieve with conventional digital holography. However there has been an important issue of low and noisy signal in HFM which slows …

Anions Govern Cell Volume: A Case Study Of Relative Astrocytic And Neuronal Swelling In Spreading Depolarization, Niklas Hübel, Ghanim Ullah

Physics Faculty Publications

Cell volume changes are ubiquitous in normal and pathological activity of the brain. Nevertheless, we know little about the dynamics of cell and tissue swelling, and the differential changes in the volumes of neurons and glia during pathological states such as spreading depolarizations (SD) under ischemic and non–ischemic conditions, and epileptic seizures. By combining the Hodgkin–Huxley type spiking dynamics, dynamic ion concentrations, and simultaneous neuronal and astroglial volume changes into a comprehensive model, we elucidate why glial cells swell more than neurons in SD and the special case of anoxic depolarization (AD), and explore the relative contributions of the two …

Production Of Biodiesel From Soybean Oil Using Supercritical Methanol, Shriyash Rajendra Deshpande

USF Tampa Graduate Theses and Dissertations

The slow yet steady expansion of the global economies, has led to an increased demand for energy and fuel, which would eventually lead to shortage of fossil fuel resources in the near future. Consequently, researchers have been investigating other fuels like biodiesel. Biodiesel refers to the monoalkyl esters which can be derived from a wide range of sources like vegetable oils, animal fats, algae lipids and waste greases. Currently, biodiesel is largely produced by the conventional route, using an acid, a base or an enzyme catalyst. Drawbacks associated with this route result in higher production costs and longer processing times. …

Interface‐Coupled Bifeo3/Bimno3 Superlattices With Magnetic Transition Temperature Up To 410 K, Eun-Mi Choi, Josée E. Kliebeuker, Thomas Fix, Jie Xiong, Christy J. Kinane, Dario Arena, Sean Langridge, Aiping Chen, Zhenxing Bi, Joon Hwan Lee, Quanix Jia, Mark G. Blamire, Judith L. Macmanus-Driscoll

Physics Faculty Publications

Enhanced magnetic transition temperatures are demonstrated in 50 nm thick (001)‐oriented (BiFeO₃)_m/(BiMnO₃)_m (BFO/BMO) superlattices (SL). Highly strained ultra‐short SLs showed a magnetic transition, T_C2, up to ≈410 K as a result of ferrimagnetic interaction between BFO/BMO. All SL showed a new ferromagnetic transtion, T_C1, of ≈150 K coming from Fe⁴⁺‐Fe⁴⁺ interaction explained by electron transfer/leakage from Fe³⁺ to Mn³⁺.

Leonard Systems And Their Friends, Jonathan Spiewak

USF Tampa Graduate Theses and Dissertations

Let $V$ be a finite-dimensional vector space over a field $\mathbb{K}$, and let

\text{End}$(V)$ be the set of all $\mathbb{K}$-linear transformations from $V$ to $V$.

A {\em Leonard system} on $V$ is a sequence

\[(\A ;\B; \lbrace E_i\rbrace_{i=0}^d; \lbrace E^*_i\rbrace_{i=0}^d),\]

where

$\A$ and $\B $ are multiplicity-free elements of \text{End}$(V)$;

$\lbrace E_i\rbrace_{i=0}^d$ and $\lbrace E^*_i\rbrace_{i=0}^d$

are orderings of the primitive idempotents of $\A $ and $\B$, respectively; and

for $0\leq i, j\leq d$, the expressions $E_i\B E_j$ and $E^*_i\A E^*_j$ are zero when $\vert i-j\vert > 1$ and

nonzero when $\vert i-j \vert = 1$.

%

Leonard systems arise in connection …

Enhancement Of Supercapacitor Energy Storage By Leakage Reduction And Electrode Modification, Tete Tevi

USF Tampa Graduate Theses and Dissertations

Supercapacitors have emerged in recent years as a promising energy storage technology. The main mechanism of energy storage is based on electrostatic separation of charges in a region at the electrode-electrolyte interface called double layer. Various electrode materials including carbon and conducting polymers have been used in supercapacitors. Also, supercapacitors offer high life cycle and high power density among electrochemical energy storage devices. Despite their interesting features, supercapacitors present some disadvantages that limit their competitivity with other storage devices in some applications. One of those drawbacks is high self-discharge or leakage. The leakage occurs when electrons cross the double layer …

Restricted Mobility Of Specific Functional Groups Reduces Anti-Cancer Drug Activity In Healthy Cells, Murillo L. Martins, Rosanna Ignazzi, Juergen Eckert, Benjamin Watts, Ramon Kaneno, Willian F Zambuzzi, Luke Daemen, Margarida J Saeki, Heloisa N Bordallo

Chemistry Faculty Publications

The most common cancer treatments currently available are radio- and chemo-therapy. These therapies have, however, drawbacks, such as, the reduction in quality of life and the low efficiency of radiotherapy in cases of multiple metastases. To lessen these effects, we have encapsulated an anti-cancer drug into a biocompatible matrix. In-vitro assays indicate that this bio-nanocomposite is able to interact and cause morphological changes in cancer cells. Meanwhile, no alterations were observed in monocytes and fibroblasts, indicating that this system might carry the drug in living organisms with reduced clearance rate and toxicity. X-rays and neutrons were used to investigate the …

An Efficient Scheme For Numerical Solution Of Burgers’ Equation Using Quintic Hermite Interpolating Polynomials, Shelly Arora, Inderpreet Kaur

Mathematics and Statistics Faculty Publications

A numerical scheme combining the features of quintic Hermite interpolating polynomials and orthogonal collocation method has been presented to solve the well-known non-linear Burgers’ equation. The quintic Hermite collocation method (QHCM) solves the non-linear Burgers’ equation directly without converting it into linear form using Hopf–Cole transformation. Stability of the QHCM has been checked using Eucledian and Supremum norms. Numerical values obtained from QHCM are compared with the values obtained from other techniques such as orthogonal collocation method, orthogonal collocation on finite elements and pdepe solver. Numerical values have been plotted using plane and surface plots to demonstrate the results graphically. …

Image Use In Social Network Communication: A Case Study Of Tweets On The Boston Marathon Bombing, Jungwon Yoon, Eunkyung Chung

School of Information Systems and Management Faculty Publications

Introduction. This study aimed to understand how images are used in communication practices in the Twitter environment. Method. 1,428 Boston marathon bombing related Twitter messages with embedded images were collected, and content analysis was conducted. Analysis. Characteristics of image use were examined and were analysed by type of Twitter messages. Results. People used diverse types of images in Twitter messages including: direct photos, captured images, computer graphics, and maps. Depending on the content of Twitter messages, uses of images were categorised into four types: 1) to illustrate news, information, and anecdotes, 2) to disseminate visual information that cannot be provided …