Physical Sciences and Mathematics Commons^™

Modeling Correlated Data Via Copulas, Panfeng Liang

Open Access Theses & Dissertations

Copulas are widely used to model the dependency structure among components of multi- variate data sets. Elliptical copulas, such as Gaussian copula, are most popular copulas being used since many data sets follow elliptical distributions or meta-elliptical distribu- tions (Fang et al. (2002)). However, today's approaches and software packages require us to assume the specific category, such as Gaussian or Student's T, of the elliptical cop- ula before estimating it. In this Thesis, we will propose a Bayesian method using Markov chain Monte Carlo (MCMC) methods to estimate the density function of elliptical copulas without specifying it is the copula …

Combination Of Resampling Based Lasso Feature Selection And Ensembles Of Regularized Regression Models, Abhijeet R. Patil

Open Access Theses & Dissertations

In high-dimensional data, the performance of various classiers is largely dependent on the selection of important features. Most of the individual classiers using existing feature selection (FS) methods do not perform well for highly correlated data. Obtaining important

features using the FS method and selecting the best performing classier is a challenging task in high throughput data. In this research, we propose a combination of resampling based least absolute shrinkage and selection operator (LASSO) feature selection (RLFS)

and ensembles of regularized regression models (ERRM) capable of handling data with the high correlation structures. The ERRM boosts the prediction accuracy with …

Dust Storms And The Dispersal Of Aquatic Invertebrates In The Chihuahuan Desert Ecoregion, Jose Rivas Jr.

Open Access Theses & Dissertations

The Chihuahuan Desert surrounding El Paso, Texas is one of the most intense sources of dust in the Western Hemisphere. Within this vast desert are ephemeral wetlands with micrometazoan propagules contained within their sediment egg banks. Dispersal of aquatic microinvertebrates between habitats is vital for the success of their populations. Passive dispersal of the propagules provides an escape mechanism from unfavorable conditions. Upon desiccation of these habitats, windstorms can potentially transport propagules mixed within entrained sediments across regional scales. To study this process, I collected falling sediment from 91 windstorms, with 59 samples collected at the University of Texas at …

Near Room Temperature Magnetocaloric Materials For Magnetic Refrigeration, Eduardo Martinez Teran

Open Access Theses & Dissertations

Magnetic refrigeration (MR) is a cooling process based on the magnetocaloric effect (MCE) that is present to some extent in all magnetic materials, and the ones in which this effect is more appreciable are called magnetocaloric materials (MCM). The implementation of new designs and materials for the construction of cooling systems is a must do, being essential that these improved designs will reduce the environmental impact and increase the efficiency of their predecessors. In this thesis, the magnetocaloric effect theory is presented from a thermodynamic point of view and also the synthesis and study to a new Heusler alloy (MnFe2Ga) …

Code Smells Quantification: A Case Study On Large Open Source Research Codebase, Swapnil Singh Chauhan

Open Access Theses & Dissertations

Research software has opened up new pathways of discovery in many and diverse disciplines. The research software is developed under unique budgetary and schedule constraints. The developers are often untrained transient workforce of graduate students and postdocs. As a result, the software quality hinders its sustainability beyond the immediate research goals. More importantly, the prevalent reward structures favor contributions in terms of research articles and systematically undervalues research code contributions. As a result, researchers and funding agencies do not allocate appropriate efforts or resources to the development, sustenance, and dissemination of research codebases. At the same time, there are no …

Formulation And Implementation Of Iterative Method For Generating Spatially-Variant Lattices, Manuel Fernando Martinez

Open Access Theses & Dissertations

The use of a matrix-free, memory-efficient approach to generate large-scale spatially variant lattices (SVL) was explored. A matrix-free iterative SVL generation algorithm was formulated and then implemented with a tremendous memory reduction observed. The algorithm consists of solving first-order central finite-differences along the entirety of the problem space point-by-point to obtain the grating phase function Φ(𝑠⃗) to which all desired spatially variant lattice properties are applied to. The algorithm was studied to identify key areas of data and task parallelism to exploit in heterogeneous computing systems consisting of clusters of central processing units (CPU) and graphics processing units (GPU) combinations. …

Precipitation And Transformation Of Iron-Sulfide Nanoparticles In Low-Temperature Aqueous Environment: Effects Of Reactant Iron And Sulfide Sources, Ezequiel A. Moreno Flores

Open Access Theses & Dissertations

Iron sulfide nanoparticles assume an important role within a wide range of geological settings as indicators of redox environmental conditions and elemental cycling mechanisms. Initial precipitates of iron sulfide are exclusively nanoscale sized in low temperature aqueous conditions and have been reported to go through diverse morphological and phase transformations, possibly leading to the ultimate deposits of pyrite in geologic records of various times. A systematic understanding of how the early-stage nanoparticles of iron sulfide may develop into more crystalline iron sulfide forms is still lacking however. The major goal for this study was to illuminate the effects of the …

Seismic Analysis Of The 30 July 1972 Sitka Earthquake Aftershocks, Stress Drop Of Aftershocks In Cook Strait, New Zealand Following The 2013 Cook Strait And Lake Grassmere And 2016 Kaikoura Earthquakes, And 2d Seismic Tomography In The Brady Hot Springs Geothermal Site, Nevada, Juan Alejandro Ochoa Chavez

Open Access Theses & Dissertations

The 1972 Mw 7.6 Sitka earthquake is the largest earthquake to have occurred along the Alaska portion of the Queen Charlotte fault (QCF) in historic time. The QCF system forms the plate boundary between the Pacific and North American plates within southeastern Alaska and has accumulated enough slip since 1972 to produce a comparable sized event in the near future. Thus, it is important to better understand the controls on the rupture process of the 1972 mainshock and its aftershocks. Following the mainshock the U.S. Geological Survey installed a network of 11 portable seismographs that recorded over 200 aftershocks of …

Synthesis, Characterization And Antibacterial Properties Of Silver(I) N-(4-Pyridyl) Benzamide Complexes With Varying Conterions, Mauro J. Ruiz

Open Access Theses & Dissertations

Organic semiconductor materials composed of - stacking aromatic compounds have been under intense investigation for their potential uses in flexible electronics and other advanced technologies. Herein we report a new family of seven - stacking compounds of Silver(I) N-(4-pyridyl) Benzamide with varying counterions, namely [Ag(NPBA)2]X, where NPBA is N-(4-pyridyl) Benzamine, X = NO3- (1), ClO4- (2), CF3SO3- (3), PF6- (4), BF4- (5), CH3PhSO3- (6), and PhSO3- (7), which form extended - stacking networks in one-dimensional (1D), 2D and 3D directions in the crystalline solid-state via the phenyl moiety, with average inter-ring distances of 3.823 Å. Interestingly, the counterions that contain …

Investigation Into The Effects Of Copper Based Nanoparticles On Sugarcane (Saccharum Officinarium) And Zucchini (Cucurbita Pepo), Carlos Tamez

Open Access Theses & Dissertations

The widespread use of copper-based nanomaterials has been accompanied by an increasing interest to understand their potential risks. Due to high surface area to volume properties, nanomaterials are more reactive than their bulk counterparts. Copper nanoparticles are used in numerous products, and could enter the environment through their synThesis or incidental use. It is essential to understand the effects of nanoparticles on edible crops by performing both short-term and long-term experiments at relevant exposure concentrations. In order to evaluate biochemical and physiological effects crops, sugarcane and zucchini, were grown in soil amended with: Kocide 3000 (copper-based fungicide), nano-sized CuO (nCuO), …

Exploring Dynamic Triggering Of Earthquakes Within The United States & Quaternary Faulting And Urban Seismic Hazards In The El Paso Metropolitan Area, Richard Alexander Alfaro-Diaz

Open Access Theses & Dissertations

Technological advances in combination with the onslaught of data availability allow for large seismic data streams to automatically and systematically be recorded, processed, and stored. Here, we develop an automated approach to identify small, local earthquakes within these large continuous seismic data records. Our aim is to automate the process of detecting small seismic events triggered by a distant large earthquake, recorded at a single station. Specifically, we apply time-domain short-term average (STA) to long-term average (LTA) ratio algorithms to three-component data to create a catalog of detections. We remove some of the false detections by requiring the detection be …

Urban Water Demand In Arid-Regions: Modeling And Forecasting Climatic And Economic Effects, Tallen Ashley Capt

Open Access Theses & Dissertations

Water demand is an ever-growing concern for many municipalities around the world and understanding the driving forces of demand is critical to ensure sustainability. The goal of this research was to develop mechanistic models of urban water demand that could be used as decision support tools for regional water managers. This Dissertation research focused on modeling water consumption in El Paso, Texas at the daily and annual time scale for use in a long-term forecast. The Dissertation is divided into three major chapters: the first two chapters describe independent models on (1) meteorological and (2) economic effects, respectively. The third …

Mesacs: A Multi-Method Environmental Study Over The Arctic Chukchi Sea, Julio Eduardo Ceniceros

Open Access Theses & Dissertations

The Arctic environment is a dynamic part of Earth’s natural system and is currently undergoing rapid increasing air temperature and decreasing sea ice extent, leading to more open ocean waters. As open water areas become more prevalent, phytoplankton communities near the surface of the ocean can proliferate earlier in the year and are apt to reach higher concentrations by the end of the summer season. Phytoplankton biomass around the world has been known to produce a microscopic biofilm at the surface of the ocean composed of biogenic and biological particles which then become airborne and work as both cloud condensation …

Computational Studies On Perovskite-Metallofullerene Interface And Magnetic Properties Of Mn-Based Mixed Olivines, Bethuel Omutiti Khamala

Open Access Theses & Dissertations

Methyl ammonium lead halide (MAPbX3) perovskite based solar cells have recently emerged as promising class of materials for photovoltaic applications with efficiencies reaching over 22%. Designing interfaces with strong binding is vital to developing efficient, high-performing solar cells. Fullerene-based materials are widely employed as efficient electron acceptors and can serve as electron transporting layer in perovskite based solar cells. We have studied interfaces of methyl ammonium lead iodide MAPbI3 with Sc3N@C80 fullerene and Sc3N@C80PCBM fullerene derivate within the density functional formalism. Different surface terminations and orientations of the methyl ammonium are examined for binding of the fullerene layer. Our calculated …

Spectroscopic Analysis Of Calcium Oxalate Kidney Stone Inhibition By Nordihydroguaiaretic Acid (Ndga), Mahendra Subedi

Open Access Theses & Dissertations

This current study provides information regarding the inhibition of calcium oxalate type of kidney stones by the use of nordihydroguaiaretic acid (NDGA). Around 80% of kidney stones found in patients are principally made of calcium oxalate and calcium phosphate. NDGA is an antioxidant compound that is chemically extracted from the desert bush Larrea tridentata. This work is a logical continuation of a previous research, where different concentrations of Larrea tridentata extract were used for such inhibition. Size and morphological changes from a calcium oxalate monohydrate (COM) structure to a calcium oxalate dihydrate (COD) structure were previously reported.

In the current …

A Study Of Solvent Effects On The Ground And Excited States Of Endohedral Tri-Scandium Nitride C80 Fullerene Coupled With Zinc Phthalocyanine And Metal-Free Phthalocyanine Using Dft-Pcm Method, Timilsina Prasad Timlsina

Open Access Theses & Dissertations

The photovoltaic active materials composed of endohedral metafullerene and phthalocyanine derivatives are known as excellent electron donor-acceptor pairs. The tri-metallic nitride endohedral C80 fullerene exhibits high absorption coefficients in the visible region of the spectrum and has similar electron-accepting abilities as that of C60 fullerene, which can allow for higher efficiencies in OPV devices. In this study, we examine the effect of solvent on the charge transfer excitation energies of Sc3N@C80-ZnPc and Sc3N@C80-H2Pc donor-acceptor molecular complexes. Three different solvents with different polarity - water, toluene, and acetone are used. The solvent is modeled as a polarizable continuum as implemented in …

Low-Valent Synthons Of Titanium : Investigations On Structure-Reactivity Relationships, Rolando Aguilar

Open Access Theses & Dissertations

Strategies for the functionalization of abundant, small molecules into products with added value provide a powerful approach to address environmental sustainability issues. Dinitrogen (N2), and carbon oxides (CO, CO2), are examples of the ample, yet, underutilized atmospheric feedstock of nitrogen and carbon building blocks to produce a variety of chemicals. Although, potentially valuable, small molecules are inert under most conditions, and as such, their industrial activation often requires heterogeneous catalysts operated under high pressures (200 atm) and temperatures (450-600 ºC).

To this end, great efforts in synthetic inorganic chemistry have been devoted to the generation of well-defined and highly reactive …

Energy Efficiency And Fatigue Failure On Gears And Bearings For Processing Rebar Steel, Jesus Gabriel Garcia

Open Access Theses & Dissertations

Steel industry is a major emitter of air pollutants, a leading industrial consumer of water, a minor source of contaminated liquids, a massive producer of solid waste, and a significant source of CO2. The objective on this thesis work is to minimize the greenhouse gas emissions when processing steel. Gears and bearings were evaluated based on their performance when exposed to cyclic stresses. The importance for having a proper set up on rolling mills to increase efficiency for processing rebar steel has been detailed on paper. In contrast, mechanical vibration has been measured on gears and bearings to determine efficiency …

A Novel Set Of Weight Initialization Techniques For Deep Learning Architectures, Diego Aguirre

Open Access Theses & Dissertations

The importance of weight initialization when building a deep learning model is often underappreciated. Even though it is usually seen as a minor detail in the model creation cycle, this process has shown to have a strong impact on the training time of a network and the quality of the resulting model. In fact, the implications of choosing a poor initialization scheme range from leading to the creation of a poorly performing model to preventing optimization techniques (like stochastic gradient descent) from converging.

In this work, we introduce and evaluate a set of novel weight initialization techniques for deep learning …

Non Linear Optics For Materials Fabrication And Medical Instrumentation, Aurelio Paez

Open Access Theses & Dissertations

Two-photon absorption is a nonlinear optical process where two photons are absorbed by a molecule simultaneously. The probability of this quantum phenomenon is proportional to the quadratic excitation of light intensity. It has many applications in biomedical and materials research, such as two-photon fluorescence microcopy. The first project is to apply two-photon absorption induced bond cleavage in photoreactive materials for engineering 3D tissue scaffolds. The major challenge for growing thick 3D tissues is the lack of vasculature, where nutrients and oxygen can be delivered to the growing cells. Our collaborators have synthesized a novel polypeptide that is composed of 34-mer …

Quasi-Harmonic And Anharmonic Entropies In Transition Metals, Bimal K C

Open Access Theses & Dissertations

Density functional theory (DFT) employing the quasi-harmonic approximation (QHA) is a robust method for evaluating thermal properties of solids. In the case of transition metals however, the method yields high values of the thermal pressure when compared to experimental data or with more direct methods like quantum-molecular dynamics (QMD) simulations. Surprisingly, there has not been to date, a systematic study aimed at understanding the reasons for these large discrepancies, particularly at low temperature, i.e. below the Debye temperature of the solid. Using Tantalum as a test model for which a lot of experimental data exist, thermal properties were evaluated employing …

Study Of Multielectron Redox Chemistry In Bimetallic Complexes And Metal-Free Macrocycles, Nancy Rodriguez Lopez

Open Access Theses & Dissertations

Multielectron redox chemistry is fundamental for the activation of small molecules (e.g. H2O, CO2, CO, N2). Although these processes are of great importance, they are not well understood. Unravelling the mechanisms of electron transfer and its principles is essential for the design and development of efficient catalysts. Our approach towards the understanding of multielectron redox chemistry includes theoretical study of mechanistic pathways in the hydrogen evolution reaction (HER) by metal-free porphyrinoids, the study of electronic communication in non-symmetric multimetallic two-state models (D–B–A) and the tuning of the electronic properties of bimetallic systems (Mo, and Au) by ligand control.

In Chapter …

Inverse Gaussian Ornstein-Uhlenbeck Applied To Modeling High Frequency Data, Emmanuel Kofi Kusi

Open Access Theses & Dissertations

With about 226050 estimated deaths worldwide in 2010, earthquake is considered as one of the disasters that record a great number of deaths. This Thesis develops a model for the estimation of magnitude of future seismic events.

We propose a stochastic differential equation arising on the Ornstein-Uhlenbeck processes driven by Inverse Gaussian (a,b) process. Inverse Gaussian (a,b) Ornstein-Uhlenbeck processes offer analytic flexibility and provides a class of continuous time processes capable of exhibiting long memory behavior. The stochastic differential equation is applied to geophysics and financial stock market by fitting the superposed Inverse Gaussian (a,b) Ornstein-Uhlenbeck model to earthquake and …

Decision Making Under Uncertainty With Applications To Geosciences And Finance, Laxman Bokati

Open Access Theses & Dissertations

In many practical situations, we need to make a decision. In engineering, we need to decide on the best design of a system, and, for existing systems â?? on the best control strategy. In financial applications, we need to decide what is the best way to invest money. In geosciences, we need to decide whether we should explore a possible mineral deposit â?? or whether we should perform more experiments and measurements (and what exactly). In some cases, we can compute the exact consequences of each decision - e.g., if we are controlling a satellite. However, in many other cases, …

Synthesis Of Advanced Functional Nanomaterials For Sustainable Water Treatment Technologies, Md Tariqul Islam

Open Access Theses & Dissertations

Water is the most essential resource for the sustenance of life. Water is also necessary for agriculture, industry, household, and environmental conservation. However, due to large population growth and industrial expansion, access to clean water is becoming increasingly difficult around the world. Current water treatment technologies have not changed in over one hundred years and require a large infrastructure due to their low efficiencies and large-scale needs. In this context, the utilization of advanced functional nanomaterials and the adaptation of nanotechnology could potentially allow for miniaturizing water treatment and develop de-centralized solutions for rural areas. This Dissertation presents the design, …

Fishers' Ecological Knowledge And Stable Isotope Analysis: A Social-Ecological Systems Approach To Endangered Species Conservation, Kathryn Rose Wedemeyer-Strombel

Open Access Theses & Dissertations

Identifying developmental habitat is essential for understanding population structure and species resiliency, especially for critically endangered species. In long-lived, oceanic, migratory animals such as sea turtles, elucidating developmental grounds is particularly difficult. When data are deficient or challenging to acquire, scientists often lean towards traditional quantitative methods when a social-ecological systems approach could better provide crucial baseline data and guiding information. Fishers’ ecological knowledge (FEK), the combination of experiential and culturally transmitted knowledge, is expert knowledge and should be treated as such. In 2008, FEK led to the “rediscovery” of the critically endangered eastern Pacific (EP) population of hawksbill sea …

Interactions Of Bacterial Communities With Hydrous Sulfate Minerals In Water-Restricted Gypsic Environments: A Case Study Based In The White Sands National Monument, Brandon Nicholas Lajoie

Open Access Theses & Dissertations

Microbial communities have been commonly found to survive and thrive in arid to hyper-arid gypsic environments that are considered hostile to most other forms of life. The mechanisms through which microbes have conquered these harsh environments remain poorly understood. Here I hypothesize that the microbial communities in water-restricted gypsic settings could benefit in terms of energy and water sources via their interactions with the abundant hydrous sulfate minerals [i.e., gypsum (CaSO4·2H2O)] that build up these niches. Gypsum is of high bio-relevance because its sulfate component may be used as electron acceptor by sulfate-reducing bacteria and the crystallization water may be …

Study Of D-Electron Systems With Fermi-Lowdin Orbital Self-Interaction Correction, Prakash Mishra

Open Access Theses & Dissertations

Density Functional Theory (DFT) is one of the very popular and versatile methods for calculations to study electronic structure, and the accuracy of DFT depends on the approximation used in the exchange-correlation functional. One of the known problems with the approximation is that the widely used density functional approximations (DFA) suffer self-interaction errors. Systems with d-electrons such as transition metal oxides often show deviation of DFT predicted behavior from experimental result. SIE tends to unphysically lower the energies of fractionally occupied state which leads to deviation from piece-wise linear behavior of total energy between two integer occupations. This leads to …

Sequence Stratigraphy, Diagenesis, And Depositional Facies Of An Exposed Megaflap: Pennsylvanian Hermosa Group, Gypsum Valley Salt Wall, Paradox Basin, Colorado, Kyle Thomas Deatrick

Open Access Theses & Dissertations

Outcrop exposures mostly of the Pennsylvanian Honaker Trail Formation provide a 2 km strike-oriented view of a megaflap on the southwestern flank of the Gypsum Valley salt wall, Paradox Basin, Colorado that serves as an outcrop analog for megaflaps recently drilled unexpectedly in the Gulf of Mexico and other salt basins worldwide. The near vertical (80-90°) stratal panel comprises a 60 m thick succession of non-evaporite facies of the Pennsylvanian upper Paradox Formation, overlain by a 117 m section of cyclic shallow marine carbonates and siliciclastics of the Honaker Trail Formation. Near vertical upper Paradox and Honaker Trail strata are …

Confidence Intervals For The Expected P-Value, Emmanuel Kofi Abrefa

Open Access Theses & Dissertations

The p-value is widely used in many application fields. In common practice, a scientific finding is deemed statistically significant if its resultant p-value is less than a pre-specified significance level, for example α = 0.05, albeit many statistically significant results are not reproducible in new studies. Mixed reasons including misuses, abuses, misunderstanding and misinterpretation arouse intensive debates and conservatives around the p-value from time to time over the years. Yet no reasonable solutions have been proposed. In this research, we make efforts to close the gap by advocating the use of confidence level for the expected p-value p0. This allows …