Physical Sciences and Mathematics Commons^™

A Study Of The Dayside High-Latitude Ionospheric Electrodynamics During Extended Solar Minimum, Janelle V. Jenniges

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This research investigated how electric fields, currents, and charged particles in Earth's high-latitude ionosphere respond to changing input from the sun. The ionosphere surrounds the entire Earth, makes radio communication possible, and can significantly degrade satellite communications and geo-positioning (navigation) capabilities. Many satellites fly within the ionosphere where a solar storm can cause increased satellite drag or destroy onboard electronics. Therefore, understanding and correctly predicting the behavior of this environment is important, and the results from this research will be used to improve current ionospheric models.

A relationship between the level of magnetic activity on Earth due to changes in …

Classification Of Five-Dimensional Lie Algebras With One-Dimensional Subalgebras Acting As Subalgebras Of The Lorentz Algebra, Jordan Rozum

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Motivated by A. Z. Petrov's classification of four-dimensional Lorentzian metrics, we provide an algebraic classification of the isometry-isotropy pairs of four-dimensional pseudo-Riemannian metrics admitting local slices with five-dimensional isometries contained in the Lorentz algebra. A purely Lie algebraic approach is applied with emphasis on the use of Lie theoretic invariants to distinguish invariant algebra-subalgebra pairs. This method yields an algorithm for identifying isometry-isotropy pairs subject to the aforementioned constraints.

Factors Related To Successful Completion Of Developmental Mathematics Courses, Jason Bagley

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The goal of this research was to identify factors that contribute to students’ achievement in developmental math courses. This research collected information on several factors which have been suggested to have an effect on student achievement, particularly in developmental math courses at Utah State University, and analyzed their effects on student achievement. The literature review identified several factors that appeared related to student achievement, but many of these studies only analyzed a few factors. Very few studies have tried to analyze multiple variables together to try and identify which factors contribute most to student achievement and which observations can be …

Advancement Of Computing On Large Datasets Via Parallel Computing And Cyberinfrastructure, Ahmet Artu Yildirim

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Large datasets require high processing power to compute, high-speed network connections to transmit, or high storage capacity to archive. With the advent of the internet, many in the science community and the public at large are faced with a need to manage, store, transmit and process large datasets in an efficient fashion to create value for all concerned. By example, large environmental researchers analyze large map data to extract hydrologic information from topography. However, processing these data and other tasks is hard – sometimes impossible – in minimal resource environments such as desktop systems.

This dissertation demonstrates novel approaches and …

Cultural Entropy: A Grounded Theory Study Of Early Childhood Experiences In Nature In The Arroyo Grande Creek Watershed, Nathaniel Miles Millard

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Through support from a Quinney Fellowship and the Institute of Outdoor Recreation and Tourism in the Department of Environment and Society at Utah State University, the theory of cultural entropy emerged as an explanation for changing behavior across generations of people living in the Arroyo Grande Creek watershed. Through a trounded theory methodology data collection around early childhood experiences with nature leading towards positive civic engagement with the community, the theory of cultural entropy emerged along with a policy recommendation for reconnecting the community to the local watershed.

Lifelong residents participating in the research were found to have high levels …

The Role Of Thermospheric Neutral Winds In The Mid-Latitude Ionospheric Evening Anomalies, Levan Lomidze

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Earth's ionosphere, which is the ionized part of the upper atmosphere, plays a very important role in ground- and satellite-based radio communication and navigation. During the last half century, a considerable experimental, theoretical, and modeling effort has been directed towards understanding the physical processes that affect the variation of the ionization in the ionosphere at various spatial and temporal scales. Even though tremendous progress has been made in many directions of ionospheric research, many questions remain to be answered.

One of the intriguing features in the ionosphere is an anomalous evening enhancement that occurs over certain mid-latitude locations, where …

Geochemical Characterization Of The Mountain Home Geothermal System, Trevor Alex Atkinson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Mountain Home (MH) geothermal system of the western Snake River Plain (SRP) magmatic province was discovered in 2012 by the Snake River Geothermal Drilling Project. Artesian flowing water with a temperature of 150°C was encountered at a depth of 1745 m below ground surface (mbgs) and extensive mineralized fracture networks of pectolite-prehnite, calcite, and laumontite were discovered in the recovered core. The objectives of this study are to: 1) describe the thermal and compositional history of past geothermal fluids, and 2) compare these fluids to modern fluids in order to characterize the evolution of the MH geothermal system and …

Explicit Construction Of First Integrals For The Toda Flow On A Classical Simple Lie Algebra, Patrick Seegmiller

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Toda flow is a generalization of a dynamical system describing the interaction of particles in a one-dimensional crystal. The concepts and energy and conservation are prominent in the study of dynamical systems, and quantities which remain the same over the evolution of a system provide valuable insights into the system’s behavior. In the realm of mathematics these quantities are called first integrals, or integrals of motion. This paper provides a background for study of the Toda flow, a verification of its integrability, and programming code for finding these quantities which remain unchanged over the evolution of the system.

Optical Characterization Of Carbon Nanotube Forests, Brian D. Wood

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Carbon nanotube forests are vertically grown tubular formations of graphene. Due to their inherent microstructure and geometry, they are ideal light absorbers over a broad spectrum, making this material an excellent absorber in applications such as radiometry, optical calibration, and stray light suppression. Samples were made with several growth conditions and substrates to provide forests of different morphologies. Optical data of these samples were gathered by taking spectroscopic reflectance and transmittance measurements in the mid-infrared spectral range. Results were correlated to the various forest morphologies. From this, the conditions necessary to maximize the absorption of the forests were found and …

Improving Reuse Of Distributed Transaction Software With Transaction-Aware Aspects, Anas Ahmad Alsobeh

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Implementing crosscutting concerns for transactions is difficult, even using Aspect-Oriented Programming Languages (AOPLs) such as AspectJ. Many of these challenges arise because the context of a transaction-related crosscutting concern consists of loosely-coupled abstractions like dynamically-generated identifiers, timestamps, and tentative value sets of distributed resources. Current AOPLs do not provide joinpoints and pointcuts for weaving advice into high-level abstractions or contexts, like transaction contexts. Other challenges stem from the essential complexity in the nature of the data, operations on the data, or the volume of data, and accidental complexity comes from the way that the problem is being solved, even using …

Great Salt Lake Past And Present: Elevation And Salinity Changes To Utah's Great Salt Lake From Railroad Causeway Alterations, James S. White

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Utah's Great Salt Lake contributes and estimated $1.3 billion to the local and regional economy and is a vital food-source for migratory and resident birds. In 1959, the lake was fundamentally changed with construction of an earth-filled, semi-permeable railroad causeway which splits the lake into two "arms". The only flow interaction between these two arms is through the semi-permeable causeway material, and three openings in the causeway. In 2013, two of these causeway openings were closed, and a bridge was proposed to improve flow between arms. Four bridge designs were proposed. I modeled Great Salt Lake water and salt distribution …

Analytical Comparison Of Bovine Parentage Single Nucleotide Polymorphisms, Joshua Jeffrey Dallin

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Often on cattle operations and dairy farms, where multiple bulls are exposed to cows either by live cover or artificial insemination, error can be present in parentage record keeping for breed registries or production use. Research has evolved to the integration of using single nucleotide polymorphisms (SNPs) to answer questions where cases of unknown parentage may exist. With the evolution of the research, differentiated panels have been created specifically for parentage analysis. Our objective was to complete an analytical comparison between two specific panels, a proven 88 parentage SNP panel and a recently developed 25 SNP panel. A smaller panel …

Computational Prediction And Rational Design Of Novel Clusters, Nanoparticles, And Solid State Materials, Alexander S. Ivanov

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The prediction of structure at the atomic level is one of the most fundamental challenges in materials science. Indeed, the structure is arguably the most important piece of information about a material, as it determines pretty much all properties of a material. Knowing the structure, one can analyze a large number of properties of a material, even before it is synthesized – the crucial importance of structure prediction for computational molecular design. This dissertation describes the technique of reliable theoretical predictions and presents the results on the successfully predicted unusual clusters, nanoparticles and solid state materials. The major part of …

Synthesis Of Fluorogenic Probes For Studying Biomass Degradation And Synthesis Of New Antifungal Aminoglycosides, Qian Zhang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

For the first project, a library of fifteen commercially purchased and synthetic fluorogenic probes were employed for the investigation of biomass degradation using extract of white-rot fungi. These discoveries prove that it is possible to employ fungi for selective degradation or release of hemicelluloses from biomass. This work is supported by Sun Grant Western Regional Center/DOT "Bioprospecting for Enzymes to Break Lignin-Hemicellulose Bond" ($300,000,09/01/2011-08/31/2013)

The second project is focused on synthesizing new aminoglycoside analogs and exploring the potential to revive traditional antibacterial kanamycin as new type of antifungal agents. Although aminoglycosides antibiotics are mainly used as antibacterial agents, this project …

The Onion Name System: Tor-Powered Distributed Dns For Tor Hidden Services, Jesse Victors

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Tor network is a third-generation onion router that aims to provide private and anonymous Internet access to its users. In recent years its userbase, network, and community have grown significantly in response to revelations of national and global electronic surveillance, and it remains one of the most popular anonymity networks in use today. Tor also provides access to anonymous servers known as hidden services – servers of unknown location and ownership that may provide websites, chat services, or an electronic dead drop. These hidden services can be accessed through any Tor-powered web browser but they suffer from usability challenges …

A Chronostratigraphic Record Of Arroyo Entrenchment And Aggradation In Kanab Creek, Southern Utah, Kirk F. Townsend

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The purpose of this study is to explore the processes that lead to the formation of arroyos. Arroyos are entrenched stream channels with steep sides that form by incision into valley-fill sediment, and are common features throughout the southwest United States. Many of these systems formed during the late AD 1800s and early 1900s in one of the most significant historic geomorphic events in the region. At this time, former river floodplains were abandoned, creating terraces. This caused a decline in local water tables and associated changes in stream discharge, vegetative communities, and the ability to irrigate once fertile floodplains. …

Altitudinal Variability Of Quiet-Time Plasma Drifts In The Equatorial Ionosphere, Debrup Hui

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In the modern world, we increasingly depend on space-based systems for our communication, positioning, and navigation systems. These systems depend on electromagnetic waves propagating through the ionosphere. The ionosphere is the medium in the upper atmosphere where, due to presence of the charged atomic and molecular particles and electrons collectively known as plasma, it influences the traveling electromagnetic waves following laws of electrodynamics. Improved models for predicting space weather conditions require improved knowledge of the drifts of these plasmas in the ionosphere. This study is focused on climatology of the altitudinal variations of these plasma drifts in the equatorial latitudes. …

Statistical Dependence In Imputed High-Dimensional Data For A Colorectal Cancer Study, Anvar Suyundikov

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The research objective of this dissertation was to provide novel statistical methods to fill potential gaps in the analyses of micro-ribonucleic acid (miRNA) data, and consequently to identify the miRNAs that contribute to cancer development. Mainly, this dissertation addressed the statistical issues raised by the statistical dependence of imputed (i.e., the missing data were replaced with substituted values) miRNA data in the colorectal cancer study. This dissertation presented a modified imputation method, the weighted KNN imputation accounting for dependence, that predicted the expression levels of missing normal samples with greater imputation accuracy than other imputation methods, and had moderate power …

Pathway Pioneer: Heterogeneous Server Architecture For Scientific Visualization And Pathway Search In Metabolic Network Using Informed Search, Vipul Kantilal Oswal

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

PathwayPioneer is a website to visualize the biological models. The complex metabolic models are hard to perceive when read through text format. It is even more difficult to understand the flow of network and different subsystem or pathways. PathwayPioneer organizes different subsystems into simple graphical representation. We simplify the complex network based on subsystem and compartment. Users can do computation (flux balance analysis) through the user interface and perceive the changed model visually. Our system is one of its kind to handle large model files with quick response time.

Biologists are often interested in knowing different alternative pathways targeting a …

Multi-Scale Modeling Of Microbial Defection In The Presence Of Antibiotics, Darshan Dilip Nahar

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Limited environmental resources push life into competition. In terms of microbes, we assume that the only goal is to grow and competition means to grow faster than the peers. Organisms tend to adapt to their environmental conditions and improve their efficiency in using the common resources to grow faster. While different organisms compete they engage into various social behaviors like cooperation to work together towards a common goal, e.g., production of public goods that benefits the entire population. Hence a part of the resources at hand is dedicated to participate in cooperative activities if the cost-to-benefit ratio is less than …

Multiversejava, Vishal Sharma

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Sequenced semantics, which was first proposed in the context of temporal databases, is the semantics for the evaluation of a program on values annotated with time metadata. The time metadata records when each value is “live” (is valid or has existence). Sequenced semantics stipulates that a computation on values annotated with temporal metadata must be equivalent to, in effect, running the computation at every time point with only the values alive at that time. Sequenced semantics is challenging to program because it is more than just a re-interpretation of the run-time behavior of a program; for instance, a sequenced “if-else” …

The Kimama Core: A 6.4 Ma Record Of Volcanism, Sedimentation, And Magma Petrogenesis On The Axial Volcanic High, Snake River Plain, Id, Katherine Elizabeth Potter

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Snake River Plain (SRP) is one of the best-preserved examples of continental hotspot volcanis, with a continuous record of volcanism that extends over 16 Ma to the present. Yellowstone-Snake River Plain records the migration of plume-tail volcanism from inception at the Bruneau-Jarbridge caldera complex at 12.6 Ma to its present locus, under the Yellowstone Plateau.

Records kept by the Snake River Plain volcanic actions include rhyolite lavas and ignimbritesm minor coeval basalts, and an overlying veneer of younger basalts. The central SRP has received comparatively little attention in the past. The Kimama core hole was drilled as part of …

Landscape Evolution Of The Needles Fault Zone, Utah, Investigated Through Chronostratigraphic And Terrain Analyses, Faye L. Geiger

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Arcing eastward from the deep gorge of Cataract Canyon on the Colorado River is a series of aligned valleys (graben) and ridges (horst). This unusual landscape has formed as subsurface salt deforms toward the river and dissolves away, causing the overlying rocks to fault, slide, and subside. Geologists have long been interested in this actively evolving area they call the Needles fault zone, because understanding its mechanics and origin may shed light on how faults work in general and similar, yet inaccessible places like offshore rift zones or even the surface of the Moon. Despite this interest, the timing and …

Automated Reverse Engineering Of Malware To Develop Network Signatures To Match With Known Network Signatures, Dan Sinema

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Illicit software that seeks to steal user information, deny service, or cause general mayhem on computer networks is often discovered after the damage has been done. The ability to discover network behavior of software before a computer network is utilized would allow administrators to protect and preserve valuable resources. Static reverse engineering is the process of discovering in a offline environment how a software application is built and how it will behave. By automating static reverse engineering, software behavior can be discovered before it is executed on client devices. Fingerprints are then built from the discovered behavior which is matched …

Implementation And Application Of The Curds And Whey Algorithm To Regression Problems, John Kidd

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

A common statistical problem is trying to predict two or more variables using a set of predictor variables. The simplest model for this situation is called multivariate linear regression. This method uses each set of predictor variables to predict each of the response variables separately. This approach seems counter-intuitive as any possible relationship between the variables being predicted is ignored.

Breiman and Friedman found a way to take advantage of relationships among the response variables to increase the accuracy of the predictions for each of the predicted variables with an algorithm they called Curds and
Whey. It uses other statistical …

Family-Wise Error Rate Control In Quantitative Trait Loci (Qtl) Mapping And Gene Ontology Graphs With Remarks On Family Selection, Garrett Saunders

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

One of the great aims of statistics, the science of collecting, analyzing, and interpreting data, is to protect against the probability of falsely rejecting an accepted claim, or hypothesis, given observed data stemming from some experiment. This is generally known as protecting against a Type I Error, or controlling the Type I Error rate. The extension of this protection against Type I Errors to the situation where thousands upon thousands of hypotheses are examined simultaneously is known as multiple hypothesis testing. This dissertation presents an improvement to an existing multiple hypothesis testing approach, the Focus Level method, specific to gene …

Gravitational Wave Astrophysics With Compact Binary Systems, Eric Addison

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Gravitational waves are ripples in the fabric of spacetime that convey information about changing gravitational fields. Large-scale detection projects are currently in operation, and more advanced detectors are being designed and built. Though we have yet to make a direct detection of a gravitational wave signal, upgrades to current detectors are expected to bring the first detections within the next year or two.

Gravitational waves will bring us information about astrophysical phenomena that is complementary to the information gained from photon-based observations (e.g., telescopes and radio receivers). One of the primary sources of gravitational waves are binary systems: two massive …

Molecular Systematics, Historical Biogeography, And Evolution Of Spider Wasps (Hymenoptera: Pompilidae), Juanita Rodriguez

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The study of the diversity and classification of any group of organisms provides a foundation for further scientific studies in ecology, evolution, and conservation. Insects are among the most diverse organisms that inhabit the planet, but knowledge of their diversity and classification is still limited. One understudied group of insects is spider wasps. These are solitary parasitoids that use one spider to lay a single egg. There are approximately 5,000 described species, and many more to be described. Unfortunately, fewer than 10 scientists worldwide study these insects. One reason the group has not been very well studied is the difficulty …

Mesoscale Deformational Features Near Outcrop Analogs Of A Reservoir-Seal Interface: Implications For Seal Failure, Santiago L. Flores

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The boundary that separates reservoir rocks from caprock seals is generally considered a flow barrier for reservoir fluids. Buoyant fluids do no flow through the caprocks because they have low permeability and molecular forces at the base of the caprock resist upward flow. Deformation at the reservoir/caprock boundary may include fractures that increase permeability and lessen the effect of the molecular forces.

The injection and storage of carbon dioxide (CO₂) in porous sandstone with effective top seals below earth’s surface is a possible solution for reducing the amount of human-created CO₂ in the atmosphere. Uplift and erosion …

Structure And Multi-Center Bonding: From Atomic Clusters To Solid Phase Materials, Timur R. Galeev

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The work presented in this dissertation has been focused on structure, stability, and chemical bonding of atomic clusters and solid-state compounds. The common thread was development of theoretical models and methods capable of interpreting bonding and hence, structures of these species. A major part of this work presents joint experimental and theoretical studies of a large series of doped boron clusters. The dissertation introduces a new theoretical tool for interpretation of bonding of solid phase materials in chemically intuitive terms of localized and multi-center bonds. Understanding how interactions between atoms in sub-nano clusters and solid-state compounds determine their structures, physical …