Physical Sciences and Mathematics Commons^™

Testing For The Effects Of Sediment Sorting On Detrital-Zircon Age Spectra By Sampling Multiple Bedforms In Single Fluvial Channels: Case Studies From The Wood Canyon Formation (Terreneuvian) And Stirling Quartzite (Ediacaran), Southeastern Ca, Jason Gerhard Muhlbauer

Masters Theses

Multiple bedforms were sampled from single fluvial channels in the Neoproterozoic (Ediacaran) upper member of the Stirling Quartzite and the Cambrian (Terreneuvian) middle member of the Wood Canyon Formation, southeastern California. Sampling strategy was designed to determine if sorting of detrital zircon populations by their textural properties can affect detrital-zircon age spectra in fluvial sandstones. Four samples derive from the middle member Wood Canyon Formation and two samples come from the upper member Stirling Quartzite. Sandstone samples vary in textural characteristics: grain sizes sampled range from fine to coarse sand, sorting ranges from moderately well to poorly sorted, and sampled …

Chemical Investigations Of Diabetes Mellitus, Malaria, And Castrate-Resistant Prostate Cancer, Maggie Sparks Lookadoo

Masters Theses

This work studies a variety of molecules and the systems they are involved in to further understand disease and treatment of diabetes mellitus, malaria, and castrate resistant prostate cancer. The first system studied, diabetes mellitus, involves synthesis of 5 different steroidal compounds, while the other two systems, malaria and castrate-resistant prostate cancer, apply mass spectrometric-based untargeted metabolomics to study both known metabolites and unknown spectral features.

Diabetes mellitus is a result of the dysfunction and death of islet beta cells caused by the transcription of pro-inflammatory cytokines resulting in reduced insulin secretion and uncontrollable blood glucose levels. Glucocorticoids can reduce …

Siloxane And Silane-Functionalized Polynorbornenes As Membranes For Passive Carbon Dioxide Separation, Eunice Koheun Hong

Masters Theses

In 2012, carbon dioxide (CO₂) [carbon dioxide] accounted for approximately 82% [percent] of all U.S greenhouse gas emissions.¹ These excessive CO2 levels have been attributed to climate changes that have a range of negative effects on human health and welfare.1 In an effort to decrease these emissions, polymeric membranes consisting of silane- and siloxane-functionalized norbornene units have been targeted as a potential solution for the passive separation of CO2 from other non-greenhouse gases. These substituted norbornene-based polymers were synthesized via vinyl-addition polymerization. Through a series of catalyst trials, commercially available palladium and nickel catalysts were compared along …

Rare Occurrences Of Free-Living Bacteria Belonging To Sedimenticola From Subtidal Seagrass Beds Associated With The Lucinid Clam, Stewartia Floridana, Aaron M. Goemann

Masters Theses

Lucinid clams and their sulfur-oxidizing endosymbionts comprise two compartments of a three-stage, biogeochemical relationship among the clams, seagrasses, and microbial communities in marine sediments. A population of the lucinid clam, Stewartia floridana, was sampled from a subtidal seagrass bed at Bokeelia Island Seaport in Florida to test the hypotheses: (1) S. floridana, like other lucinids, are more abundant in seagrass beds than bare sediments; (2) S. floridana gill microbiomes are dominated by one bacterial operational taxonomic unit (OTU) at a sequence similarity threshold level of 97% (a common cutoff for species level taxonomy) from 16S rRNA genes; …

Environmental Controls On The Diversity And Distribution Of Endosymbionts Associated With Phacoides Pectinatus (Bivalvia: Lucinidae) From Shallow Mangrove And Seagrass Sediments, St. Lucie County, Florida, Thomas Walters Doty

Masters Theses

Lucinid bivalves are capable of colonizing traditionally inhospitable shallow marine sediments due to metabolic functions of bacterial endosymbionts located within their gills. Because lucinids can often be the dominant sediment infauna, defining their roles in sediment and pore fluid geochemical cycling is necessary to address concerns related to changes in coastal biological diversity and to understanding the sensitivity of threatened coastal ecosystems over time. However, there has been limited research done to understand the diversity and distribution of many lucinid chemosymbiotic systems. Therefore, the goals of this thesis were to evaluate the distribution of Phacoides pectinatus and its endosymbiont communities …

Experimental Limestone Dissolution And Changes In Multiscale Structure Using Small- And Ultra Small- Angle Neutron Scattering, Chad Alan Novack

Masters Theses

Small angle neutron scattering (SANS), ultra-small angle neutron scattering (USANS), and backscatter electron (BSE) imaging, along with neutron computed tomography (NCT) were used in this study to experimentally quantify pore size, distribution, and connectivity of dissolved limestone geometries. Eight samples of Indiana limestone of two different initial permeabilities (2-4 mD and 70 mD ) [millidarcy] were reacted with HCl [hydrochloric acid] solutions at differing pH (2 and 4), and flow rates (0.1 and 10 cm³/min) [cubic centimeters per minute] to describe a broad range of parameters that affect limestone dissolution. NCT was first used to image the dissolution …

Long-Term Impacts Of Conservation Management Practices On Soil Carbon Storage, Stability, And Utilization Under Cotton Production In West Tennessee, Candace Brooke Wilson

Masters Theses

Biogeochemical cycling of soil carbon (C) is heavily influenced by conservation agricultural (CA) practices. This study examined SOC stability under three CA practices: reduced nitrogen (N) fertilizer application rate, cover cropping, and zero-tillage implemented for 31 years. Respiration rates measured from a 602-day incubation period were fitted to a double-pool first order exponential model of SOC decomposition. The active [respired] SOC pool showed distinct differences between applications of reduced (34N kg ha^-1 [-1]) and high fertilization rates (101N kg ha^-1) combined with tillage, and suggest that high fertilizer applications with conventional tillage allocated more C into a …

Strontium Monoxide Measurements In Methane-Air Flames, Bobby J. Wimberly

Masters Theses

The spectroscopy of alkaline earth metal compounds has been an area of active research for several decades. This is at least in part stimulated by the application of these compounds to practical areas ranging from technology to medicine. The use of these compounds in the field of pyrotechnics was the motivation for a series of flame emission spectroscopy (FES) experiments with strontium containing compounds. Specifically, strontium monoxide (SrO) is studied as a candidate radiator for the diagnostic of methane-air flames.

SrO emissions have been observed in flames with temperatures in the range of 1200-1600-K for two compounds: strontium hydroxide and …

Late Tertiary Tectonic Uplift In The Southern And Central Appalachians, Mary Sheela Biswal

Masters Theses

The exposed Appalachian Mountains extend about 2500 km from Newfoundland to Alabama with the highest peaks >2000 m above sea level. The last orogeny that affected Appalachian crust was the 325-260 Ma Alleghanian. Even with minimal erosion rates, it is highly unlikely that the Appalachians could have sustained such elevations for over 200 m.y., suggesting that recent tectonic uplift has produced today’s mountainous topography. The multiple phases of Tertiary uplift are related to poorly understood processes, but a large amount of data from today’s mountain chain and the adjacent Coastal Plain indicate the present high topography is anomalous and clearly …

Hsp-Wrap: The Design And Evaluation Of Reusable Parallelism For A Subclass Of Data-Intensive Applications, Paul R. Giblock

Masters Theses

There is an increasing gap between the rate at which data is generated by scientific and non-scientific fields and the rate at which data can be processed by available computing resources. In this paper, we introduce the fields of Bioinformatics and Cheminformatics; two fields where big data has become a problem due to continuing advances in the technologies that drives these fields: such as gene sequencing and small ligand exploration. We introduce high performance computing as a means to process this growing base of data in order to facilitate knowledge discovery. We enumerate goals of the project including reusability, efficiency, …

Preparation And Characterization Of Thermodynamically Controlled Polymer Nanocomposites, Jiadi Hou

Masters Theses

The mechanical and physical properties of polymeric materials can be greatly improved by adding nanoscale additives. To mediate the dispersion of nanoparticles in polymers, it is often necessary to modify their surfaces to prevent aggregation. While polymer nanocomposites system consisting of homopolymer-grafted nanoparticles are well understood, copolymer-functionalized nanoparticles are less well understood but provide additional ways to alter dispersion through the use of chemically different comonomers. In this thesis, polystyrene nanocomposites blended with copolymer-grafted nanoparticles were prepared and studied. The particular comonomers used were methyl methacrylate and cyclohexyl methacrylate, which provides miscibility with polystyrene. Polymers with varying comonomer ratios were …

Border-Collision Bifurcations Of Cardiac Calcium Cycling, Jacob Michael Kahle

Masters Theses

In this thesis, we study the nonlinear dynamics of calcium cycling within a cardiac cell. We develop piecewise smooth mapping models to describe intracellular calcium cycling in cardiac myocyte. Then, border-collision bifurcations that arise in these piecewise maps are investigated. These studies are carried out using both one-dimensional and two-dimensional models. Studies in this work lead to interesting insights on the stability of cardiac dynamics, suggesting possible mechanisms for cardiac alternans. Alternans is the precursor of sudden cardiac arrests, a leading cause of death in the United States.

Installation And Alignment Of The N3he Experiment, Eric Lee Plemons

Masters Theses

The n3He experiment is designed to probe the hadronic weak interaction by measuring the parity violating asymmetry between the spin of incoming neutrons and the momentum of outgoing protons following the nuclear break up of a helium three upon absorbing a neutron. Cold neutrons from the SNS are first polarized then allowed to impact a target chamber filled with helium three where the reaction occurs. Energetic particles resulting from the nuclear breakup ionize the helium three gas and are thereby detected as currents by an array of signal wires within the target chamber. In order to make a statistics limited …

Neutrino Signatures In Terrestrial Detectors From Two- And Three-Dimensional Core-Collapse Supernovae Simulations, Tanner Brooks Devotie

Masters Theses

Core-collapse supernovae (CCSNe) are driven by neutrino emission and are the most prodigious sources of neutrinos in the Universe. Importantly, the neutrino radiation from CCSNe is emitted from deep in the explosion and can provide information about physical processes taking place in the newly-born neutron star at the heart of the event. We examine the four-flavor (i.e. ν_e, ν_e, ν_x and ν_x) [electron, muon and tau neutrinos along with their anti-matter counterparts] signature of CCSNe neutrino emission in various neutrino detector types. We use data from the multidimensional Chimera (Lentz et al., 2015) …

Determination Of Dispersal Patterns And Characterization Of Important Habitats For Lake Sturgeon Restoration In The Upper Tennessee River System, Christina Grace Saidak

Masters Theses

Lake Sturgeon, Acipenser fulvescens, are one of the slowest to reach sexual maturity and longest-lived freshwater fish species in North America. These fish are a species of special concern by the U.S. Fish and Wildlife Service, a vulnerable species by the American Fisheries Society (Jelks et al. 2008), and a threatened species in Tennessee (Chiasson et al. 1997; Williams et al. 1989). They have been reintroduced into the Upper Tennessee River system since 2000.

Since December 2013, 49 Lake Sturgeon have been implanted with ultrasonic acoustic transmitters, and 26 fixed-station receivers installed throughout the Upper Tennessee River System to …

Rapid Dissolution For Destructive Assay Of Nuclear Melt Glass, Jonathan Allen Gill

Masters Theses

This study evaluates four methods for dissolving complex glassy debris resulting from nuclear detonations. The samples of interest simulate the glassy debris generated from a nuclear detonation’s fireball coming in contact with solid masses. Each method attempts to achieve dissolution through different approaches involving either acid digestion, alkaline digestion, or molten salt fusion. Two of the four methods were modified to retain all elements of the debris or surrogate debris. This retention is critical to the proportional relationships used in identifying fuel types and designs of nuclear weapons. Analysis is conducted with an inductively coupled time of flight mass spectrometer …

Superimposed And Auxiliary Dunes Of The Northern Namib Sand Sea: A Ground-Penetrating Radar Study, Clayton K. Chandler

Theses and Dissertations

Understanding modern features allows for their use as analogues for understanding the environments of the past and even environments on other planetary bodies. This study uses Ground-Penetrating Radar (GPR) to image the near surface sedimentary structures on a large linear dune in the northern Namib Sand Sea and image the sedimentary structure of an auxiliary dune. GPR data was collected using a 200 MHz antenna with a continuous scan method and was processed by removing direct arrival, gain balancing, migration and more which produced the highest resolution imagery from this region to date. Large dune data was analyzed to determine …

Facilitating Corpus Annotation By Improving Annotation Aggregation, Paul L. Felt

Theses and Dissertations

Annotated text corpora facilitate the linguistic investigation of language as well as the automation of natural language processing (NLP) tasks. NLP tasks include problems such as spam email detection, grammatical analysis, and identifying mentions of people, places, and events in text. However, constructing high quality annotated corpora can be expensive. Cost can be reduced by employing low-cost internet workers in a practice known as crowdsourcing, but the resulting annotations are often inaccurate, decreasing the usefulness of a corpus. This inaccuracy is typically mitigated by collecting multiple redundant judgments and aggregating them (e.g., via majority vote) to produce high quality consensus …

Production And Harvest Of Microalgae In Wastewater Raceways With Resource Recycling, Alexander Colin Roberts

Master's Theses

Microalgae can be grown on municipal wastewater media to both treat the wastewater and produce feedstock for algae biofuel production. However the reliability of treatment must be demonstrated, as well as high areal algae productivity on recycled wastewater media and efficient sedimentation harvesting. This processes was studied at pilot scale in the present research.

A pilot facility was operated with nine CO₂-supplemented raceway ponds, each with a 33-m² surface area and a 0.3-m depth, continuously from March 6, 2013 through September 24, 2014. The ponds were operated as three sets of triplicates with two sets continuously fed …

A Statistical Model For The Prediction Of Dissolved Oxygen Dynamics And The Potential For Hypoxia In The Mississippi Sound And Bight, Andreas Moshogianis

Master's Theses

Hypoxia events occur when dissolved oxygen concentrations fall below the minimum threshold (dissolved oxygen concentrations < 2 mg O₂ L^-1) necessary to avoid respiratory distress among aquatic organisms. In the Mississippi Sound and Bight, hypoxia is most prevalent from late-spring through late summer. Since hypoxia events can have dramatic effects on coastal fisheries, the spatial and temporal magnitude of hypoxia presents a clear threat to the productive fisheries in the northern Gulf of Mexico. Long-term hydrographic data were collected from eight sampling stations on a monthly basis from January 2009 to December 2011 along a cross-shelf transect from the mouth of …

Modelling Water Uptake Provides A New Perspective On Grass And Tree Coexistence, Michael G. Mazzacavallo, Andrew Kulmatiski

Wildland Resources Faculty Publications

Root biomass distributions have long been used to infer patterns of resource uptake. These patterns are used to understand plant growth, plant coexistence and water budgets. Root biomass, however, may be a poor indicator of resource uptake because large roots typically do not absorb water, fine roots do not absorb water from dry soils and roots of different species can be difficult to differentiate. In a sub-tropical savanna, Kruger Park, South Africa, we used a hydrologic tracer experiment to describe the abundance of active grass and tree roots across the soil profile. We then used this tracer data to parameterize …

The Bounded Edge Coloring Problem And Offline Crossbar Scheduling, Jonathan Turner

All Computer Science and Engineering Research

This paper introduces a variant of the classical edge coloring problem in graphs that can be applied to an offline scheduling problem for crossbar switches. We show that the problem is NP-complete, develop three lower bounds bounds on the optimal solution value and evaluate the performance of several approximation algorithms, both analytically and experimentally. We show how to approximate an optimal solution with a worst-case performance ratio of 3/2 and our experimental results demonstrate that the best algorithms produce results that very closely track a lower bound.

Faster Maximium Priority Matchings In Bipartite Graphs, Jonathan Turner

All Computer Science and Engineering Research

A maximum priority matching is a matching in an undirected graph that maximizes a priority score defined with respect to given vertex priorities. An earlier paper showed how to find maximum priority matchings in unweighted graphs. This paper describes an algorithm for bipartite graphs that is faster when the number of distinct priority classes is limited. For graphs with k distinct priority classes it runs in O(kmn1/2) time, where n is the number of vertices in the graph and m is the number of edges.

A Physiologically-Based Pharmacokinetic Model For Vancomycin, Rebekah White

Undergraduate Honors Theses

Vancomycin is an antibiotic used for the treatment of systemic infections. It is given

intravenously usually every twelve or twenty-four hours. This particular drug has a

medium level of boundedness, with approximately fty percent of the drug being free

and thus physiologically eective. A physiologically-based pharmacokinetic (PBPK)

model was used to better understand the absorption, distribution, and elimination of

the drug. Using optimal parameters, the model could be used in the future to test

how various factors, such as BMI or excretion levels, might aect the concentration

of the antibiotic.

Analysis Of Water Quality In New Jersey, Kaitlyn Scrudato

Theses, Dissertations and Culminating Projects

Numerous diseases can occur when swimming or fishing in contaminated water. It is important that the quality of water is being monitored prior to recreational activities. To model the quality of the water at any given time with available predictors, data from bodies of water across New Jersey from 1999 to 2013 was collected from the database STORET. The water quality parameters studied were Escherichia coli (E. coli) and enterococcus with the predictors as Dissolved oxygen (DO), pH, Salinity, Temperature, Total Dissolved Solids (TDS) and Total Suspended Solids (TSS). The data was broken down by habitat type. The habitat types …

Use Of Cubic B-Spline In Approximating Solutions Of Boundary Value Problems, Maria Mungia, Dambaru Bhatta

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

Here we investigate the use of cubic B-spline functions in solving boundary value problems. First, we derive the linear, quadratic, and cubic B-spline functions. Then we use the cubic B-spline functions to solve second order linear boundary value problems. We consider constant coefficient and variable coefficient cases with non-homogeneous boundary conditions for ordinary differential equations. We also use this numerical method for the space variable to obtain solutions for second order linear partial differential equations. Numerical results for various cases are presented and compared with exact solutions.

Supercnn: A Superpixelwise Convolutional Neural Network For Salient Object Detection, Shengfeng He, Rynson W.H. Lau, Wenxi Liu, Zhe Huang, Qingxiong Yang

Research Collection School Of Computing and Information Systems

Existing computational models for salient object detection primarily rely on hand-crafted features, which are only able to capture low-level contrast information. In this paper, we learn the hierarchical contrast features by formulating salient object detection as a binary labeling problem using deep learning techniques. A novel superpixelwise convolutional neural network approach, called SuperCNN, is proposed to learn the internal representations of saliency in an efficient manner. In contrast to the classical convolutional networks, SuperCNN has four main properties. First, the proposed method is able to learn the hierarchical contrast features, as it is fed by two meaningful superpixel sequences, which …

Incremental Dcop Search Algorithms For Solving Dynamic Dcop Problems, William Yeoh, Pradeep Varakantham, Xiaoxun Sun, Sven Koenig

Research Collection School Of Computing and Information Systems

Distributed constraint optimization (DCOP) problems are well-suited for modeling multi-agent coordination problems. However, it only models static problems, which do not change over time. Consequently, researchers have introduced the Dynamic DCOP (DDCOP) model to model dynamic problems. In this paper, we make two key contributions: (a) a procedure to reason with the incremental changes in DDCOPs and (b) an incremental pseudo-tree construction algorithm that can be used by DCOP algorithms such as any-space ADOPT and any-space BnB-ADOPT to solve DDCOPs. Due to the incremental reasoning employed, our experimental results show that any-space ADOPT and any-space BnB-ADOPT are up to 42% …

Active Crowdsourcing For Annotation, Shuji Hao, Chunyan Miao, Steven C. H. Hoi, Peilin Zhao

Research Collection School Of Computing and Information Systems

Crowdsourcing has shown great potential in obtaining large-scale and cheap labels for different tasks. However, obtaining reliable labels is challenging due to several reasons, such as noisy annotators, limited budget and so on. The state-of-the-art approaches, either suffer in some noisy scenarios, or rely on unlimited resources to acquire reliable labels. In this article, we adopt the learning with expert~(AKA worker in crowdsourcing) advice framework to robustly infer accurate labels by considering the reliability of each worker. However, in order to accurately predict the reliability of each worker, traditional learning with expert advice will consult with external oracles~(AKA domain experts) …

On Neighborhood Effects In Location-Based Social Networks, Thanh-Nam Doan, Freddy Chong-Tat Chua, Ee-Peng Lim

Research Collection School Of Computing and Information Systems

In this paper, we analyze factors that determine the check-in decisions of users on venues using a location-based social network dataset. Based on a Foursquare dataset constructed from Singapore-based users, we devise a stringent criteria to identify the actual home locations of a subset of users. Using these users' check-ins, we aim to ascertain the neighborhood effect on the venues visited, compared with the activity level of users. We further formulate the check-in count prediction and check-in prediction tasks. A comprehensive set of features have been defined and they encompass information from users, venues, their neighbors, and friendship networks. We …