Physical Sciences and Mathematics Commons^™

Chemistry Department Newsletter 2014, Ken Overway

Chemistry Department Newsletters

This document contains a summary of news and events from the chemistry department from the 2013-2014 academic year.

The Periodical Fall 2014, Southern Adventist University

the Periodical – Chemistry Department Newsletter

Volume 1, issue 2 of the Periodical includes articles about Brent Hamstra accepting the Chair position, a student missions feature, Chemistry Club news, pictures of the department's Candyland decorations for National Chemistry Week, an alumni spotlight, and listing of December 2014 graduates.

Laboratory Measurements Of Contact Freezing By Dust And Bacteria At Temperatures Of Mixed-Phase Clouds, Joseph Niehaus, John Becker, Alexander Kostinski, Will Cantrell

Department of Physics Publications

Laboratory measurements of freezing by aerosol particles in contact mode are presented. The fraction of particles catalyzing freezing is quantified for three mineral dusts and three strains of bacteria. This is the most comprehensive such dataset to date for temperatures greater than −20°C, relevant for warm, mixed-phase clouds. For Arizona Test Dust, feldspar, or rhyolitic ash, more than 10³ particles are required to initiate a freezing event at −20°C in the contact mode. At −15°C, more than 10⁵ particles are required. An ice-negative strain of Pseudomonas fluorescens is an order of magnitude more effective than the mineral dusts …

Regulating Signal Enhancement With Coordination-Coupled Deprotonation Of A Hydrazone Switch, Justin T. Foy, Debdas Ray, Ivan Aprahamian

Dartmouth Scholarship

Proton relay plays an important role in many biocatalytic pathways. In order to mimic such processes in the context of molecular switches, we developed coordination-coupled deprotonation (CCD) driven signaling and signal enhancement sequences. This was accomplished by using the zinc(ii)-initiated CCD of a hydrazone switch to instigate an acid catalyzed imine bond hydrolysis that separates a quencher from a fluorophore thus leading to emission amplification. Because CCD is a reversible process, we were able to show that the catalysis can be regulated and turned “on” and “off” using a metalation/demetalation cycle.

Fall 2014

Scientia

CSH progress notes; Alumna entrepreneur finds success at the intersection of chemistry and law; Lions, lycopods and laboratories: CSH students thrive in summer internships; Fielding a team for a mission to Mars; Professor Craig Klugman on the medical humanities; Lab Notes

Low Voltage Electrowetting Device And Method For Making Same, Yuguang Cai, Xiaoning Zhang

Chemistry Faculty Patents

An electrowetting device includes a substrate having a first face, a charged adhesion layer immobilized on the first face of the substrate and a dielectric layer bound to the charged adhesion layer. An unbound ionic liquid phase contacts the dielectric layer.

Polymorphism In Myristoylpalmitoylphosphatidylcholine., Stephanie Tristram-Nagle, Yisrael Isaacson, Yulia Lyatskaya, Yufeng Liu, Kay Brummond, John Katsaras, John Nagle

Prof. Stephanie Tristram-Nagle Ph.D.

This study focuses on the mixed-chain lipid myristoylpalmitoylphosphatidylcholine (MPPC) near full hydration. The lipid, synthesized according to the procedure of (Mason et al., 1981a, has a low degree of acyl chain migration. When MPPC is temperature-jumped (T-jumped) from the L alpha phase (T = 38 degrees C) to T = 20 degrees C or below, a subgel phase forms; this formation takes less than 1 h at a temperature below T = 12 degrees C. The subgel remains stable up to T = 29 degrees C. When MPPC is T-jumped from the L alpha phase to T = 24 degrees …

Collaborative Chemical Information Literacy: Is It "Scholarly?", Barbara C. Harvey

Barbara C. Harvey

This symposium illustrates a collaborative classroom activity that incorporates information literacy into an introductory chemistry course. The primary learning outcomes of the activity are to understand the peer-review process, knowing how to locate original research articles based on “clues” in a general news article, and how to differentiate between popular and scholarly periodicals. Students work in small groups in a highly-collaborative classroom setting. Each group is given a recent chemistry-related news item, and must determine how and where to find the original research article the news item is based on. Emphasis is placed on identifying original, peer-reviewed research publications. Each …

A Novel Dual Allosteric Activation Mechanism Of Escherichia Coli Adp-Glucose Pyrophosphorylase: The Role Of Pyruvate, Matías D. Asención Diez, Mabel C. Aleanzi, Alberto A. Iglesias, Miguel Ballicora

Chemistry: Faculty Publications and Other Works

Fructose-1,6-bisphosphate activates ADP-glucose pyrophosphorylase and the synthesis of glycogen in Escherichia coli. Here, we show that although pyruvate is a weak activator by itself, it synergically enhances the fructose-1,6-bisphosphate activation. They increase the enzyme affinity for each other, and the combination increases Vmax, substrate apparent affinity, and decreases AMP inhibition. Our results indicate that there are two distinct interacting allosteric sites for activation. Hence, pyruvate modulates E. coli glycogen metabolism by orchestrating a functional network of allosteric regulators. We postulate that this novel dual activator mechanism increases the evolvability of ADP-glucose pyrophosphorylase and its related metabolic control.

Development And Application Of Explicitly Correlated Wave Function Based Methods For The Investigation Of Optical Properties Of Semiconductor Nanomaterials, Jennifer Mary Elward

Dissertations - ALL

Semiconductor nanoparticles, or quantum dots (QDs), are well known to have very unique optical and electronic properties. These properties can be controlled and tailored as a function of several influential factors, including but not limited to the particle size and shape, effect of composition and heterojunction as well as the effect of ligand on the particle surface. This customizable nature leads to extensive experimental and theoretical research on the capabilities of these quantum dots for many application purposes.

However, in order to be able to understand and thus further the development of these materials, one must first understand the fundamental …

College Of Science And Mathematics Newsletter, Summer 2014, College Of Science And Mathematics, Wright State University

College of Science and Mathematics Newsletters

This 9 page newsletter discusses various happenings within the College of Science and Mathematics. It begins with a letter from the dean, and continues on with news, events, alumni news, and other community news.

Nanocarbon Immobilized Membrane For Separation And Analysis, Madhuleena Bhadra

Dissertations

Membrane processes classically cover a wide range of applications associated with various aspects of separation and purification. Over the last few years, membrane based processes have received much interest due to their compact and modular architecture, low energy consumption and cost effective separation. With the development of diverse nanomaterials which can serve as nanosorbents, or provide specific morphology for selective solute transport, recent years have witnessed the emergence of nanocarbon based membranes that can address some of the limitations of conventional membrane processes and make feasible the next generation of breakthroughs.

The objective of this research is the exploration of …

Characterization And Optimization Of Extraction Chromatography Resins For Rapid Separations For Safeguard And Nuclear Forensics Purposes, Audrey Roman

UNLV Theses, Dissertations, Professional Papers, and Capstones

In this work, extraction chromatography resins, DGA and UTEVA, were characterized under various conditions in order to identify novel rapid separations for safeguards and nuclear forensic purposes. For safeguards purposes, mixed matrices containing some of the largest components found in used fuel and either Am, Pu, or U were characterized on DGA and UTEVA resins in order to determine any effects from the addition of these constituents. Results indicated that 5 M HNO₃ would be an optimal loading condition due to the consistent actinide adsorption in the presence of the additional used fuel components. Investigations of varying the anion …

Syntheses Of Precursors To Fluorine-18 Labeled Pet Imaging Agents, Lindsay B. Boling

Chancellor’s Honors Program Projects

No abstract provided.

Case Study Of A Successful Educational Partnership: University Of Illinois At Urbana-Champaign And The Illinois Mathematics And Science Academy, Dave Devol

Faculty Publications & Research

This article describes partnerships between an NCSSSMST member institution and a research university and the use of student-generated survey data as a means of both professional self-reflection and asking further questions. As a chemist, I have been trained to write in the style of scientists, and in fact I teach a course at the Illinois Mathematics and Science Academy on the methods of science and scientific writing. This article is intentionally not written in a scientific style; rather is written to convey a story of how a partnership between institutions naturally progressed into my current area of research into motivational …

College Of Science And Mathematics Newsletter, Spring 2014, College Of Science And Mathematics, Wright State University

College of Science and Mathematics Newsletters

This 9 page newsletter discusses various happenings within the College of Science and Mathematics. It begins with a letter from the dean, and continues on with news, events, alumni news, and other community news.

Isolation Of Antibacterial Compounds From Artemisia Californica, Jae Eun Min

Seaver College Research And Scholarly Achievement Symposium

The Chumash Native Americans of Southern California have well-documented traditions of using plants for medicinal purposes. If a specific plant has traditionally been used by Chumash for the treatment of cuts, wounds and infections, it may contain chemicals with anti-bacterial properties. One plant that fits these criteria is Artemisia californica (coastal sage). Because of the widespread use of antibiotics over the past sixty years bacteria are evolving greater resistance to known antibiotics, but unfortunately the rate of antibiotic discovery has diminished during the past twenty years. Therefore, novel and effective antibiotics are essential for the continued treatment of bacterial infections. …

Systems And Methods For Diagnosis And Monitoring Of Bacteria-Related Conditions, Sylvia Daunert, Sapna K. Deo, Patrizia Pacini, Anjali Kumari Struss, Harohalli Shashidhar, Deborah R. Auer Flomenhoft, Nilesh Raut

Chemistry Faculty Patents

The presently-disclosed subject matter provides systems, methods, and kits for diagnosing and/or monitoring a bacteria-related condition of interest in a subject by providing a cell sensing system, each system containing a reporter molecule capable of detecting binding of a quorum sensing molecule and capable of generating a detectable signal.

Gene And Protein Sequence Optimization For High-Level Production Of Fully Active And Aglycosylated Lysostaphin In Pichia Pastoris, Hongliang Zhao, Kristina Blazanovic, Yoonjoo Choi, Chris Bailey-Kellogg, Karl E. Griswold

Dartmouth Scholarship

Lysostaphin represents a promising therapeutic agent for the treatment of staphylococcal infections, in particular those of methicillin-resistant Staphylococcus aureus (MRSA). However, conventional expression systems for the enzyme suffer from various limitations, and there remains a need for an efficient and cost-effective production process to facilitate clinical translation and the development of nonmedical applications. While Pichia pastoris is widely used for high-level production of recombinant proteins, there are two major barriers to the production of lysostaphin in this industrially relevant host: lack of expression from the wild-type lysostaphin gene and aberrant glycosylation of the wild-type protein sequence. The first barrier can …

Joule, John A. Heterocyclic Chemistry (Book Review), Jeffrey H. Glans

Jeffrey H. Glans

Book review by Jeffrey H. Glans. Joule, John A. and Keith Mills. "A Heterocyclic Chemistry. 5th ed. Wiley-Blackwell, 2010. ISBN 9781405193658 (hardcover); 9781405133005 (pbk.)

Relationship Between Altitude And Lithium In Groundwater In The United States Of America: Results Of A 1992–2003 Study, Rebekah S. Huber, Namkug Kim, Carl E. Renshaw, Perry F. Renshaw, Douglas Kondo

Dartmouth Scholarship

Therapeutic dosages of lithium are known to reduce suicide rates, which has led to investigations of confounding environmental risk factors for suicide such as lithium in groundwater. It has been speculated that this might play a role in the potential relationship between suicide and altitude. A recent study in Austria involving geospatial analysis of lithium in groundwater and suicide found lower levels of lithium at higher altitudes. Since there is no reason to suspect this correlation is universal given variation in geology, the current study set out to investigate the relationship between altitude and lithium in groundwater in the United …

College Of Science And Mathematics Newsletter, Winter 2014, College Of Science And Mathematics, Wright State University

College of Science and Mathematics Newsletters

This 8 page newsletter discusses various happenings within the College of Science and Mathematics. It begins with a letter from the dean, and continues on with news, events, alumni news, and other community news.

Enzyme-Based Nitric Oxide Releasing Thin Films And Scaffolds, Mutha Merenna Nuwan Bhagya Gunasekera

ETD Archive

Nitric oxide synthase enzyme (NOS) embedded in thin films and scaffolds, when exposed to a solution of its substrate arginine, a source of reducing equivalents, and other required ingredients of the NOS reaction, can release fluxes of nitric oxide (NO). The latter is a molecule known to counteract platelet aggregation, and thus can prevent the thrombosis cascade on the surfaces of implantable medical devices. Therefore NO antithrombogenic regimens such as active coatings and embedded scaffolds have the potential to increase the lifespan of implantable biomaterials. Layer-by-layer electrostatic adsorption allows for assembly of multi-component protein/polyelectrolytes nanostructured films. Electrospun fiber matrices may …

Science Classics, Mark Masthay

Chemistry Faculty Publications

An essay on the impact of the works in the Imprints and Impressions: Milestones in Human Progress, an exhibition of rare books from the collection of Stuart Rose. Exhibition was held Sept. 29-Nov. 9, 2014, at the University of Dayton.

Identifying Sources Of Aeolian Mineral Dust: Present And Past, Daniel R. Muhs, Joseph M. Prospero, Matthew C. Baddock, Thomas E. Gill

United States Geological Survey: Publications

Aeolian mineral dust is an important component of the Earth’s environmental systems, playing roles in the planetary radiation balance, as a source of fertilizer for biota in both terrestrial and marine realms and as an archive for understanding atmospheric circulation and paleoclimate in the geologic past. Crucial to understanding all of these roles of dust is the identification of dust sources. Here we review the methods used to identify dust sources active at present and in the past. Contemporary dust sources, produced by both glaciogenic and non-glaciogenic processes, can be readily identified by the use of Earth-orbiting satellites. These data …

The Effect Of Manipulatives On Students' Understanding Of Chemistry Concepts, Jasmine W. Banks

LSU Master's Theses

The purpose of this study was to assess the effectiveness of manipulatives on chemistry concepts. Manipulative activities were designed for four chemistry topics: Dimensional Analysis, Ionic Formulas, Molecular Shapes, and Stoichiometry. Seventy-five high school students were divided into a control or experimental group. The control group solved problems in small groups, while the experimental group used manipulatives to complete a guided activity. Students in the control group scored significantly higher on the posttest for the Dimensional Analysis and Ionic Formulas activities. There was no significant difference in the posttest scores for the Molecular Shapes and Stoichiometry posttest. While manipulatives can …

Triply Differential (E,2e) Studies Of Phenol, Silva G. Da, R. F. Neves, L. Chiari, D. B. Jones, E. Ali, Don H. Madison, C. G. Ning, K. L. Nixon, M. C. Lopes, M. J. Brunger

Physics Faculty Research & Creative Works

We have measured (e,2e) triple differential cross sections (TDCS) for the electron-impact ionisation of phenol with coplanar asymmetrical kinematics for an incident electron energy of 250 eV. Experimental measurements of the angular distribution of the slow outgoing electrons at 20 eV are obtained when the incident electron scatters through angles of -5°, -10°, and -15°, respectively. The TDCS data are compared with calculations performed within the molecular 3-body distorted wave model. In this case, a mixed level of agreement, that was dependent on the kinematical condition being probed, was observed between the theoretical and experimental results in the binary peak …

A Loose Domain Swapping Organization Confers A Remarkable Stability To The Dimeric Structure Of The Arginine Binding Protein From Thermotoga Maritima, Alessia Ruggiero, Jonathan D. Dattelbaum, Maria Staiano, Rita Berisio, Sabato D'Auria, Luigi Vitagliano

Chemistry Faculty Publications

The arginine binding protein from Thermatoga maritima (TmArgBP), a substrate binding protein (SBP) involved in the ABC system of solute transport, presents a number of remarkable properties. These include an extraordinary stability to temperature and chemical denaturants and the tendency to form multimeric structures, an uncommon feature among SBPs involved in solute transport. Here we report a biophysical and structural characterization of the TmArgBP dimer. Our data indicate that the dimer of the protein is endowed with a remarkable stability since its full dissociation requires high temperature as well as SDS and urea at high concentrations. In order to elucidate …

Stop Rotating! One Substitution Halts The B19- Motor, Francisco Cervantes-Navarro, Gerarso Martínez-Guajardo, Edison Osorio, Diego Moreno, William Tiznado, Rafael Islas, Kelling J. Donald, Gabriel Merino

Chemistry Faculty Publications

The B₁₉^- anion and other boron species have been dubbed ‘Wankel motors’ for the almost barrierless rotation of inner and outer concentric rings relative to each other in these compounds. A single substitution in B₁₉^- is shown to shut down the well-established fluxionality in the anion. A carbon atom substituted in the structure to give a neutral CB₁₈ species is shown computationally to enforce bond localization.

Specific Intracellular Uptake Of Herceptin-Conjugated Cdse/Zns Quantum Dots Into Breast Cancer Cells, Seung-Jin Han, Pierson Rathinaraj, Soo-Young Park, Young-Kyoo Kim, Joon Hyung Lee, Inn-Kyu Kang, Jong-Sik Moon, Jeffrey G. Winiarz

Chemistry Faculty Research & Creative Works

Herceptin, a typical monoclonal antibody, was immobilized on the surface of CdSe/ZnS core-shell quantum dots (QDs) to enhance their specific interactions with breast cancer cells (SK-BR3). the mean size of the core-shell quantum dots (28 nm), as determined by dynamic light scattering, increased to 86 nm after herceptin immobilization. the in vitro cell culture experiment showed that the keratin forming cancer cells (KB) proliferated well in the presence of herceptin-conjugated QDs (QD-Her, 5 nmol/mL), whereas most of the breast cancer cells (SK-BR3) had died. to clarify the mechanism of cell death, the interaction of SK-BR3 cells with QD-Her was examined …