Physical Sciences and Mathematics Commons^™

Application Of A Gene-Based Population Dynamics Model To The Optimal Egg Size Problem: Why Do Bivalve Planktotrophic Eggs Vary In Size?, Eric N. Powell, Jason Morson, John M. Klinck

CCPO Publications

The presumption is that egg quality influences larval survival and that egg size influences egg quality. Thus, larger eggs should be favored by selection. Counterweighing the tendency for egg size to increase is the number of eggs that can be produced if egg size remains small. We examine how egg size and egg number counterbalance in Crassostrea oysters, resulting in an average egg size near 50 mu m. Simulations imposing a diversity of ranges in larval survivorship-from little advantage for large eggs relative to small eggs to a great advantage-yield some anticipated outcomes in which genotypes generating larger eggs are …

Old Dominion University Climate Change And Sea Level Rise Initiative, Summer Update 2011, Larry P. Atkinson (Editor)

CCSLRI Newsletters

Summer 2011 Newsletter of the Old Dominion University Climate Change and Sea Level Rise Initiative

Controls On The Formation Of Algal Blooms In The Lower Chesapeake Bay And Its Tributaries, Ryan Eric Morse

OES Theses and Dissertations

Algal blooms occur seasonally in the Chesapeake Bay and its tributaries, and while the consequences of algal blooms have been qualitatively and quantitatively assessed, the causes of algal blooms and mechanisms of bloom initiation are still not well understood despite decades of research. In order to understand nutrient dynamics and other factors that promote the initiation of algal blooms, the Lafayette River, a tidal sub-estuary of Chesapeake Bay that experiences seasonal algal blooms, was sampled daily in the fall of 2005. Three phytoplankton blooms (Chlorophyll a concentrations exceeding twice the average of monthly measurements from 2000-2009) occurred during this period, …

Automatic High-Fidelity 3d Road Network Modeling, Jie Wang

Computational Modeling & Simulation Engineering Theses & Dissertations

Many computer applications such as racing games and driving simulations frequently make use of 3D high-fidelity road network models for a variety of purposes. However, there are very few existing methods for automatic generation of 3D realistic road networks, especially for those in the real world. On the other hand, vast road network GIS data have been collected in the past and used by a wide range of applications, such as navigation and evaluation. A method that can automatically produce 3D high-fidelity road network models from 2D real road GIS data will significantly reduce both the labor and time needed …

Effects Of 11 Years Of Co2 Enrichment On Root Biomass And Spatial Distribution In A Florida Scrub-Oak Ecosystem, Rachel Eilenfield Schroeder

Biological Sciences Theses & Dissertations

A Florida (USA) scrub-oak ecosystem was exposed to elevated atmospheric CO₂ in open-top chambers from 1996-2007. Minirhizotrons and ground-penetrating radar (GPR) were used to measure fine root (< 2 mm diameter) and coarse root (> 5 mm diameter) biomass, respectively. After 11 years of CO₂ enrichment, there was a trend of greater total root biomass under elevated CO₂. Fine root biomass exhibited a pattern of recovery and steady state throughout the study, with significant CO₂ stimulation observed only after disturbance. Greater root biomass under elevated CO₂ during recovery periods could result in greater carbon inputs belowground, alteration of the soil carbon …

The Nature, Origin And Preservation Of Amide Organic Nitrogen In Organic Matter, Georgina Anne Mckee

Chemistry & Biochemistry Theses & Dissertations

Past studies have found much of nonliving sedimentary/aqueous nitrogen-containing organic matter (NCOM) is composed of amides, assumed to be peptides/proteins. Their lability calls into question their survival, and several hypotheses have been suggested to explain this. Using Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) and nuclear magnetic resonance (NMR) spectroscopy I investigated the molecular amide composition in sedimentary/aqueous systems while reassessing their preservation and formation routes.

Development of a suitable methodology is essential for successful NCOM study due to electrospray ionisation source requirements: sediment samples need to be rendered into solution. Based on NMR and FT-ICR-MS analysis, I determined …

A Framework For Dynamic Traffic Monitoring Using Vehicular Ad-Hoc Networks, Mohammad Hadi Arbabi

Computer Science Theses & Dissertations

Traffic management centers (TMCs) need high-quality data regarding the status of roadways for monitoring and delivering up-to-date traffic conditions to the traveling public. Currently this data is measured at static points on the roadway using technologies that have significant maintenance requirements. To obtain an accurate picture of traffic on any road section at any time requires a real-time probe of vehicles traveling in that section. We envision a near-term future where network communication devices are commonly included in new vehicles. These devices will allow vehicles to form vehicular networks allowing communication among themselves, other vehicles, and roadside units (RSUs) to …

Using The Web Infrastructure For Real Time Recovery Of Missing Web Pages, Martin Klein

Computer Science Theses & Dissertations

Given the dynamic nature of the World Wide Web, missing web pages, or "404 Page not Found" responses, are part of our web browsing experience. It is our intuition that information on the web is rarely completely lost, it is just missing. In whole or in part, content often moves from one URI to another and hence it just needs to be (re-)discovered. We evaluate several methods for a \justin- time" approach to web page preservation. We investigate the suitability of lexical signatures and web page titles to rediscover missing content. It is understood that web pages change over time …

Model-Based Analyses Of Nitrogen On The Mid-Atlantic Bight Continental Shelf, Tian Tian

OES Theses and Dissertations

The biogeochemistry of continental shelf systems is an important, but poorly quantified, component of the global cycling of nitrogen and carbon. In this study, simulations obtained from a one-dimensional (ID) biogeochemical model developed for the Middle Atlantic Bight (MAB) portion of the U.S. eastern continental shelf were analyzed to investigate nitrogen cycling processes. The 1D model included lower trophic level interactions and was forced by advective fields obtained from a corresponding three-dimensional biogeochemical model. Taylor and target diagram analyses, which compared in situ measurements of sea surface temperature (SST) and salinity, and chlorophyll and particulate organic carbon (POC) derived from …

Insights Into Chemical Structure Changes Of Kerogen From Bituminous Coal In Response To Dike Intrusions Investigated By Advanced Solid-State 13C Nmr, Yuan Li

Chemistry & Biochemistry Theses & Dissertations

Variations in the chemical structures of kerogens From highly volatile bituminous coal located near two igneous dike intrusions in the Illinois Basin were examined in detail by advanced solid-state ¹³C nuclear magnetic resonance (NMR) spectroscopy. Spectral-editing techniques were used to identify specific functional groups. Direct polarization was used to quantify different functional groups. ¹H-¹³C two- dimensional heteronuclear NMR was used to examine connectivities and proximities, and ¹H-¹³C long-range recoupled dipolar dephasing was used to estimate aromatic cluster sizes. With decreasing distance to dike contacts and increasing thermal maturity (vitrinite reflectance R₀ from …

Excitation-Induced Ge Quantum Dot Growth On Si(100)-2x1 By Pulsed Laser Deposition, Ali Oguz Er

Physics Theses & Dissertations

Self-assembled Ge quantum dots (QD) are grown on Si(100)-(2×1) with laser excitation during growth processes by pulsed laser deposition (PLD). In situ reflection-high energy electron diffraction (RHEED) and post-deposition atomic force microscopy (AFM) are used to study the growth dynamics and morphology of the QDs. A Q-switched Nd:YAG laser (λ = 1064 nm, 40 ns pulse width, 5 J/cm² fluence, and 10 Hz repetition rate) were used to ablate germanium and irradiate the silicon substrate. Ge QD formation on Si(100)-(2×1) with different substrate temperatures and excitation laser energy densities was studied. The excitation laser reduces the epitaxial growth temperature …

Perfectly Matched Layer Absorbing Boundary Conditions For The Discrete Velocity Boltzmann-Bgk Equation, Elena Craig

Mathematics & Statistics Theses & Dissertations

Perfectly Matched Layer (PML) absorbing boundary conditions were first proposed by Berenger in 1994 for the Maxwell's equations of electromagnetics. Since Hu first applied the method to Euler's equations in 1996, progress made in the application of PML to Computational Aeroacoustics (CAA) includes linearized Euler equations with non-uniform mean flow, non-linear Euler equations, flows with an arbitrary mean flow direction, and non-linear clavier-Stokes equations. Although Boltzmann-BGK methods have appeared in the literature and have been shown capable of simulating aeroacoustics phenomena, very little has been done to develop absorbing boundary conditions for these methods. The purpose of this work was …

Stability Analysis And Application Of A Mathematical Cholera Model, Shu Liao, Jim Wang

Mathematics & Statistics Faculty Publications

In this paper, we conduct a dynamical analysis of the deterministic cholera model proposed in [9]. We study the stability of both the disease-free and endemic equilibria so as to explore the complex epidemic and endemic dynamics of the disease. We demonstrate a real-world application of this model by investigating the recent cholera outbreak in Zimbabwe. Meanwhile, we present numerical simulation results to verify the analytical predictions.

Improving The Efficiency Of Organic Solar Cells By Varying The Material Concentration In The Photoactive Layer, Kevin Anthony Latimer

Electrical & Computer Engineering Theses & Dissertations

Polymer-fullerene bulk heterojunction solar cells have been a rapidly improving technology over the past decade. To further improve the relatively low energy conversion efficiencies of these solar cells, several modifications need to be made to the overall device structure. Emerging technologies include cells that are fabricated with interfacial layers to facilitate charge transport, and tandem structures are being introduced to harness the absorption spectrum of polymers with varying bandgap energies.

When new structures are implemented, each layer of the cell must be optimized in order for the entire device to function efficiently. The most volatile layer of these devices is …

Improving The Efficiency Of Organic Solar Cells By Varying The Material Concentration In The Photoactive Layer, Kevin Anthony Latimer

Electrical & Computer Engineering Theses & Dissertations

Polymer-fullerene bulk heterojunction solar cells have been a rapidly improving technology over the past decade. To further improve the relatively low energy conversion efficiencies of these solar cells, several modifications need to be made to the overall device structure. Emerging technologies include cells that are fabricated with interfacial layers to facilitate charge transport, and tandem structures are being introduced to harness the absorption spectrum of polymers with varying bandgap energies.

When new structures are implemented, each layer of the cell must be optimized in order for the entire device to function efficiently. The most volatile layer of these devices is …

The Effect Of An Offshore Wind Turbine Array On Circulation In An Idealized Coastal Ocean, Mahmoud Kamel

OES Theses and Dissertations

The effect of arrays of wind turbines on circulation in the coastal ocean is analyzed with a coastal numerical model applied to a shallow coastal area like the Mid Atlantic Bight (MAB). A simplified model domain is specified with a linearly deepening shelf along a straight coastline. The initial density structure is a quasi-two layer situation with a sharp thermocline. Wind stress in most of the cases is either upwelling or downwelling favorable with constant amplitude continuing after a smooth start. There are two cases where oscillating wind forcing is used. Simulations consider wind arrays having different widths, different locations …

Circulation, Vol. 16, No. 3, Center For Coastal Physical Oceanography, Old Dominion University, Larry P. Atkinson

CCPO Circulation

Spring 2011 issue of CCPO Circulation featuring article "Offshore Wind Power and Oceanography" by Larry Atkinson

Section Abstracts: Statistics

Virginia Journal of Science

Abstracts of the Statistics Section for the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011, University of Richmond, Richmond VA.

Section Abstracts: Astronomy, Mathematics And Physics With Materials Science

Virginia Journal of Science

Abstracts for the Astronomy, Mathematics, and Physics with Materials Science Section for the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011, University of Richmond, Richmond VA.

Section Abstracts: Computer Science

Virginia Journal of Science

Abstracts of the Computer Sciences Section for the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011, University of Richmond, Richmond VA.

Population Dynamics Of Sheepshead (Archosargus Probatocephalus; Walbaum 1792) In The Chesapeake Bay Region: A Comparison To Other Areas And An Assessment Of Their Current Status, Joseph Charles Ballenger

OES Theses and Dissertations

Sheepshead recently have seen an increase in fishing pressure in Virginian waters of the Chesapeake Bay. This increase in fishing pressure has led to demands to install effective management measures to protect the fishery. However, no study regarding the population dynamics, and thus potential yield, of sheepshead has been conducted north of Cape Hatteras. We addressed the need for information regarding the population dynamics of Chesapeake Bay sheepshead by investigating their age distribution, growth rate and reproductive biology. We used this information to construct yield-per-recruit models, which local management agencies may use in the formation of scientifically based management measures. …

A Penalty-Based Approach To Handling Cluster Sizing In Mobile Ad Hoc Networks, Ryan Florin

Computer Science Theses & Dissertations

In Mobile Ad Hoc Networks (MANETs) nodes are allowed to move freely which causes instability in the network. To handle this, the nodes are grouped into clusters which make the topology of the network appear more stable. In proposed algorithms, the size of these clusters has been either ignored or handled insufficiently. This Thesis proposes a penalty-based approach to handle cluster sizing in a more appropriate manner. A configurable penalty function is defined which assigns penalties to each of the possible cluster sizes. The penalty is then used in conjunction with a merge qualifier to determine if a merge is …

A Framework For Incident Detection And Notification In Vehicular Ad-Hoc Networks, Mahmoud Abuelela

Computer Science Theses & Dissertations

The US Department of Transportation (US-DOT) estimates that over half of all congestion events are caused by highway incidents rather than by rush-hour traffic in big cities. The US-DOT also notes that in a single year, congested highways due to traffic incidents cost over $75 billion in lost worker productivity and over 8.4 billion gallons of fuel. Further, the National Highway Traffic Safety Administration (NHTSA) indicates that congested roads are one of the leading causes of traffic accidents, and in 2005 an average of 119 persons died each day in motor vehicle accidents.

Recently, Vehicular Ad-hoc Networks (VANET) employing a …

Electronic Warfare By Using Unmanned Aerial Vehicles, Aydin Meric

Electrical & Computer Engineering Theses & Dissertations

Technology continues to evolve rapidly by the day. Developments in technology should be followed closely if a country wants to become more powerful. Nowadays nobody can afford to ignore the importance of Electronic Warfare and Unmanned Aerial Vehicles (UAV) in military applications. Both of them play a crucial role in military operations that they can change the course of a war.

There are different kinds of Electronic Warfare methods that can be applied according to the situations and any evolving circumstances. In the beginning Electronic Warfare was used mainly for defensive purposes, but these days Electronic Warfare is used for …

Video Stabilization Based On Speeded-Up Robust Features, Minqi Zhou

Electrical & Computer Engineering Theses & Dissertations

With the advancement of science and technology, portable devices using video cameras are becoming more popular. Videos captured by ordinary commercial cameras always suffer from undesired motion which results from human hand shaking and mobile platform vibration. The undesired motion would not only blur the image degrading the image quality leading to inaccurate results in automatic object recognition and tracking, but also make it difficult for people to focus on specific object regions. It is also a possibility that one may feel dizzy while watching shaky video for a long time. Many hardware and software methodologies have been developed by …

Spatially-Explicit Agent-Based Modeling Of Ecosystem Change And Epizootiological Impacts On Caribbean Spiny Lobster, Panulirus Argus, Thomas William Dolan Iii

Biological Sciences Theses & Dissertations

Agent-based models explicitly incorporate interactions and variation at the individual level, just as in the real world. As a result, agent-based models are realistic, intuitive, and generally less complex mathematically than their analytical counterparts. Their primary disadvantage is the large amount of detailed data required to construct and parameterize them. Although the use of agent-based simulation is increasing in ecology, they are highly specific, so are rarely used for development of theory. To demonstrate the flexibility and utility of this approach I developed a multi-species, agent-based, spatially-explicit model of the spiny lobster nursery of southern Florida that incorporates changing salinities, …

Synthesis Of Ald Zinc Oxide And Thin Film Materials Optimization For Uv Photodetector Applications, Kandabara Nouhoum Tapily

Electrical & Computer Engineering Theses & Dissertations

Zinc oxide (ZnO) is a direct, wide bandgap semiconductor material. It is thermodynamically stable in the wurtzite structure at ambient temperature conditions. ZnO has very interesting optical and electrical properties and is a suitable candidate for numerous optoelectronic applications such as solar cells, LEDs and UV-photodetectors. ZnO is a naturally n-type semiconductor. Due to the lack of reproducible p-type ZnO, achieving good homojunction ZnO-based photodiodes such as UV-photodetectors remains a challenge. Meanwhile, heterojunction structures of ZnO with p-type substrates such as SiC, GaN, NiO, AlGaN, Si etc. are used; however, those heterojunction diodes suffer from low efficiencies. ZnO is an …

Growth Of Alkali Antimonide Photosensitive Thin Films, George Annobil

Electrical & Computer Engineering Theses & Dissertations

The experiment performed in this research addresses the growth of an alkali antimonide photosensitive film. Research was conducted to understand and develop a growth technique for a unique vapor deposition system in a vacuum environment. Specifically, the grown film will be utilized as a photocathode, and hence quantum efficiency (QE) and photocathode lifetime measurements are conducted. The research presents the successful growth of the binary compound cesium antimonide with achieved quantum efficiency of ~0.07% at ~240V anode bias. This experimental result demonstrated that the deposition technique was reliable in producing a feasible cathode. It further allowed the verification of theoretical …

Data Aggregation And Dissemination In Vehicular Ad-Hoc Networks, Khaled Ibrahim

Computer Science Theses & Dissertations

Vehicular Ad-Hoc Networks (VANETs) are a fast growing technology that many governments and automobile manufacturers are investing in to provide not only safer and more secure roads, but also informational and entertainment-based applications for drivers. The applications developed for VANETs can be classified into multiple categories (safety, informational, entertainment). Most VANET applications, regardless of their category, depend on having certain vehicular data(vehicular speed, X position and Y position) available. Although these applications appear to use the same vehicular data, the characteristics of this data (i.e., amount, accuracy, and update rate) will vary based on the application category. For …

Computational Investigation Of The Bioactive Selenium Compounds Ebselen And Selenious Acid, Sonia Antony

Chemistry & Biochemistry Theses & Dissertations

Selenium, a toxic element, is required in trace quantities for the proper functioning of biological systems. The experimental mechanistic study of the reactions of ebselen and selenious acid is difficult due to complexity of the reaction mixtures and the presence of short-lived intermediates. Computational modeling of the reactivity of these species can give us an insight into their mechanisms, but the process is complicated by proton exchanges associated with the mechanistic steps. In gas phase modeling, this may be corrected to a certain level using the solvent assisted proton exchange (SAPE) method. SAPE is a modeling technique that mimics solvent …