Physical Sciences and Mathematics Commons^™

Fractionation And Characterization Of Lignin Streams From Unique High-Lignin Content Endocarp Feedstocks, Wenqi Li, Kirtley Amos, Mi Li, Yunqiao Pu, Seth Debolt, Arthur J. Ragauskas, Jian Shi

Biosystems and Agricultural Engineering Faculty Publications

Background: Lignin is a promising source of building blocks for upgrading to valuable aromatic chemicals and materials. Endocarp biomass represents a non-edible crop residue in an existing agricultural setting which cannot be used as animal feed nor soil amendment. With significantly higher lignin content and bulk energy density, endo-carps have significant advantages to be converted into both biofuel and bioproducts as compared to other biomass resources. Deep eutectic solvent (DES) is highly effective in fractionating lignin from a variety of biomass feedstocks with high yield and purity while at lower cost comparing to certain ionic liquids.

Results: In the present …

Intranasal Rapamycin Ameliorates Alzheimer-Like Cognitive Decline In A Mouse Model Of Down Syndrome, Antonella Tramutola, Chiara Lanzillotta, Eugenio Barone, Andrea Arena, Ilaria Zuliani, Luciana Mosca, Carla Blarzino, D. Allan Butterfield, Marzia Perluigi, Fabio Di Domenico

Chemistry Faculty Publications

Background: Down syndrome (DS) individuals, by the age of 40s, are at increased risk to develop Alzheimer-like dementia, with deposition in brain of senile plaques and neurofibrillary tangles. Our laboratory recently demonstrated the disturbance of PI3K/AKT/mTOR axis in DS brain, prior and after the development of Alzheimer Disease (AD). The aberrant modulation of the mTOR signalling in DS and AD age-related cognitive decline affects crucial neuronal pathways, including insulin signaling and autophagy, involved in pathology onset and progression. Within this context, the therapeutic use of mTOR-inhibitors may prevent/attenuate the neurodegenerative phenomena. By our work we aimed to rescue mTOR signalling …

Crystal Structure Of The 13-(E)-(2-Aminobenzylidene)-Parthenolide, Shobanbabu Bommagani, Narsihma R. Penthala, Sean Parkin, Peter A. Crooks

Chemistry Faculty Publications

The title compound, C₂₁H₂₅NO₃ [systematic name: (1aR,4E,7aS,8E,10aS,10bR)-8-(2-amino­benzyl­idene)-1a,5-dimethyl-2,3,6,7,7a,8,10a,10b-octa­hydro­oxireno[2′,3′:9,10]cyclo­deca­[1,2-b]furan-9(1aH)-one], was synthesized by the reaction of parthenolide [systematic name (1aR,7aS,10aS,10bS,E)-1a,5-dimethyl-8-methyl­ene-2,3,6,7,7a,8,10a,10b-octa­hydro­oxireno[2′,3′:9,10]cyclo­deca­[1,2-b]furan-9(1aH)-one] with 2-iodo­aniline via Heck reaction conditions. The mol­ecule is composed of fused ten-, five- (lactone), and three-membered (epoxide) rings. The lactone ring shows a flattened envelope-type conformation (r.m.s. deviation from planarity = 0.0477 Å), and bears a 2-amino­benzyl­idene substituent that is disordered over two conformations [occupancy …

Blood Transfusions In Preterm Infants: Changes On Perfusion Index And Intermittent Hypoxemia, Katrina T. Ibonia, Henrietta S. Bada, Philip M. Westgate, Enrique Gomez Pomar, Prasad Bhandary, Abhijit R. Patwardhan, Elie G. Abu Jawdeh

Pediatrics Faculty Publications

BACKGROUND

Red blood cell (RBC) transfusion decreases intermittent hypoxemia (IH) events beyond the first week of life. This benefit may be related to improved perfusion to the respiratory control network. Perfusion index (PI) is a perfusion measure provided by the pulse oximeter. We hypothesized that the benefit in IH after RBC transfusion is associated with an increase in PI. In addition, we assessed the value of PI and clinical measures in predicting the effect of RBC transfusion on IH.

STUDY DESIGN AND METHODS

We prospectively enrolled infants less than 30 weeks' gestation age. PI and oxygen saturation (SpO₂) …

Managing Risk In Grazing Operations, Christopher D. Teutsch, Kenneth H. Burdine

Kentucky Grazing Conference

Risk is an inherent part of agricultural production systems. Crane and coworkers (2013) identified five primary areas of risk in grazing operations: 1) MARKETING risk, 2) PRODUCTION risk, 3) LEGAL risk, 4) HUMAN risk, and FINANCIAL risk. These types of risk are described in the accompanying publication entitled “Controlling Risk in Grazing-Based Production Systems” by J. Parsons. This article will discuss the risk associated with “production” in grazing systems, focusing specifically on managing drought in grass based production operations.

Keys To Optimizing Profitability In Cow-Calf Production -- Rooster's Beef, 3 Generations Of Farming & Beef, William Slaton, Becky Slaton

Kentucky Grazing Conference

Rooster's Beef ultimately began with our family farm -Rocky Bluff Farm - now owned by William and Becky Slaton. It is the cattle producer for our beef sold. The farm is named after two Natural Rock Formations on our property. We have several acres of pasture and including some wooded acres. With rotational grazing and intense management, we are able to have 65 cows in a spring calving group, 15 cows in a fall calving group, 3 bulls, 13 replacement heifers, unweaned calves and 12 calves on finisher feed. We also rent ground to raise and put up our own …

Grass Finished Beef: Melding Production And Marketing [2], Todd Clark

Kentucky Grazing Conference

No abstract provided.

Grass Finished Beef: Melding Production And Marketing [1], Michael Palmer, Stacie Palmer

Kentucky Grazing Conference

Palmer Farms Beef is a family farm near Murray KY, owned by Michael and Stacie Palmer. We produce, and retail around 40 beef per year.

Turning Grass Into Cash With Small Ruminants, Kenneth Andries

Kentucky Grazing Conference

As agriculture continues to change, it is important to consider sustainability before starting or expanding any enterprise. One critical factor in any animal agriculture enterprise is controlling feeding costs. Most research indicates feeding is the largest expenses in any livestock enterprise. However, nutrition is critical to overall productivity and the income of the enterprise. Because of this, producers need to find ways to improve nutrient availability while minimizing costs to optimize production and profitability for their livestock enterprise.

Grazing Dairies: Challenges And Opportunities, Howard Straub Iii

Kentucky Grazing Conference

No abstract provided.

Considerations For Making A Profit With Stocker Cattle, Jeff Lehmkuhler

Kentucky Grazing Conference

The southeast is home to more than 7.3 million beef cows (USDA 2018). At an estimated 80% weaning rate and 20% heifer retention, the southeast region would be expected to produce more than 4.6 million feeder calves that would go to market in 2018. The cow-calf industry in the region provides an opportunity for the stocker and backgrounding operations to co-exist. Much of the land in the region is best suited for forage and pasture production, which at the current moment, provides a low cost feed for adding pounds to light weight feeder cattle. Yet, the stocker and backgrounding segments …

Measuring Profitability In Grazing Operations, Kenneth H. Burdine

Kentucky Grazing Conference

When producers make investments in extending their grazing season, they do so in order to obtain an economic benefit. These benefits usually include a reduction in the number of days that stored feed (typically hay) is fed, an increase in carry capacity or stocking rate, or an increase in production level (rates of gain, weaning weights, etc). While all of these are potential benefits of improved grazing systems, a reduction in winter feeding days is often the simplest way to start. When the grazing season is extended, winter feeding days are reduced, and this cost savings can be weighed against …

Foreword And Conference Information [2018], S. Ray Smith, Christopher D. Teutsch

Kentucky Grazing Conference

No abstract provided.

Non-Abelian Quasiholes In Lattice Moore-Read States And Parent Hamiltonians, Sourav Manna, Julia Wildeboer, Germán Sierra, Anne E. B. Nielsen

Physics and Astronomy Faculty Publications

This work concerns Ising quasiholes in Moore-Read type lattice wave functions derived from conformal field theory. We commence with constructing Moore-Read type lattice states and then add quasiholes to them. By use of Metropolis Monte Carlo simulations, we analyze the features of the quasiholes, such as their size, shape, charge, and braiding properties. The braiding properties, which turn out to be the same as in the continuum Moore-Read state, demonstrate the topological attributes of the Moore-Read lattice states in a direct way. We also derive parent Hamiltonians for which the states with quasiholes included are ground states. One advantage of …

Signature Of Obliquity And Eccentricity In Soil Chronosequences, Christopher Shepard, Jon D. Pelletier, Marcel G. Schaap, Craig Rasmussen

Plant and Soil Sciences Faculty Publications

Periodic shifts in Earth's orbit alter incoming solar radiation and drive Quaternary climate cycles. However, unambiguous detection of these orbitally driven climatic changes in records of terrestrial sedimentation and pedogenesis remains poorly defined, limiting our understanding of climate change‐landscape feedbacks, impairing our interpretation of terrestrial paleoclimate proxies, and limiting linkages among pedogenesis, sedimentation, and paleoclimatic change. Using a meta‐analysis, we show that Quaternary soil ages preserved in the modern record have periodicities of 41 and 98 kyr, consistent with orbital cycles. Further, soil ages predominantly date to periods of low rates of climatic change following rapid climate shifts associated with …

Integrating Multiple Genetic Detection Methods To Estimate Population Density Of Social And Territorial Carnivores, Sean M. Murphy, Ben C. Augustine, Jennifer R. Adams, Lisette P. Waits, John J. Cox

Forestry and Natural Resources Faculty Publications

Spatial capture–recapture models can produce unbiased estimates of population density, but sparse detection data often plague studies of social and territorial carnivores. Integrating multiple types of detection data can improve estimation of the spatial scale parameter (σ), activity center locations, and density. Noninvasive genetic sampling is effective for detecting carnivores, but social structure and territoriality could cause differential detectability among population cohorts for different detection methods. Using three observation models, we evaluated the integration of genetic detection data from noninvasive hair and scat sampling of the social and territorial coyote (Canis latrans). Although precision of estimated density was …

Magnetic Ordering In A Vanadium-Organic Coordination Polymer Using A Pyrrolo[2,3-D:5,4-D']Bis(Thiazole)-Based Ligand, Yulia A. Getmanenko, Christopher S. Mullins, Vladimir N. Nesterov, Stephanie Lake, Chad Risko, Ezekiel Johnston-Halperin

Chemistry Faculty Publications

Here we present the synthesis and characterization of a hybrid vanadium-organic coordination polymer with robust magnetic order, a Curie temperature T_C of ∼110 K, a coercive field of ∼5 Oe at 5 K, and a maximum mass magnetization of about half that of the benchmark ferrimagnetic vanadium(tetracyanoethylene)_~2 (V·(TCNE)_~2). This material was prepared using a new tetracyano-substituted quinoidal organic small molecule 7 based on a tricyclic heterocycle 4-hexyl-4H-pyrrolo[2,3-d:5,4-d′]bis(thiazole) (C₆-PBTz). Single crystal X-ray diffraction of the 2,6-diiodo derivative of the parent C₆-PBTz, showed a disordered hexyl chain and …

Assessing Ecosystem Services From The Forestry-Based Reclamation Of Surface Mined Areas In The North Fork Of The Kentucky River Watershed, Kumari Gurung, Jian Yang, Lei Fang

Forestry and Natural Resources Faculty Publications

Surface mining is a major driver of land use land cover (LULC) change in many mountainous areas such as the Appalachian region. Typical reclamation practices often result in land cover dominated by grass and shrubs. Assessing ecosystem services that can be obtained from a forest landscape may help policy-makers and other stakeholders fully understand the benefits of forestry-based reclamation (FRA). The objectives of this study are to (1) identify how surface mining and reclamation changed the LULC of a watershed encompassing the north fork of the Kentucky River, (2) assess the biophysical value of four major ecosystem services under the …

Beam-Target Helicity Asymmetry E In K0Λ And K0Σ0 Photoproduction On The Neutron, D. H. Ho, R. A. Schumacher, A. D’Angelo, A. Deur, J. Fleming, C. Hanretty, T. Kageya, F. J. Klein, E. Klempt, M. M. Lowry, H. Lu, V. A. Nikonov, P. Peng, A. M. Sandorfi, A. V. Sarantsev, I. I. Strakovsky, N. K. Walford, X. Wei, R. L. Workman, K. P. Adhikari, S. Adhikari, D. Adikaram, Z. Akbar, J. Ball, L. Barion, M. Bashkanov, C. D. Bass, M. Battaglieri, I. Bedlinskiy, A. S. Biselli, Wesley P. Gohn

Physics and Astronomy Faculty Publications

We report the first measurements of the E beam-target helicity asymmetry for the γ^→ n^→ → K⁰Λ and K⁰Σ⁰ channels in the energy range 1.70 ≤ W ≤ 2.34 GeV. The CLAS system at Jefferson Lab uses a circularly polarized photon beam and a target consisting of longitudinally polarized solid molecular hydrogen deuteride with low background contamination for the measurements. The multivariate analysis method boosted decision trees is used to isolate the reactions of interest. Comparisons with predictions from the KaonMAID, SAID, and Bonn-Gatchina models are presented. These results will help separate the …

Seqothello: Querying Rna-Seq Experiments At Scale, Ye Yu, Jinpeng Liu, Xinan Liu, Yi Zhang, Eamonn Magner, Erik Lehnert, Chen Qian, Jinze Liu

Computer Science Faculty Publications

We present SeqOthello, an ultra-fast and memory-efficient indexing structure to support arbitrary sequence query against large collections of RNA-seq experiments. It takes SeqOthello only 5 min and 19.1 GB memory to conduct a global survey of 11,658 fusion events against 10,113 TCGA Pan-Cancer RNA-seq datasets. The query recovers 92.7% of tier-1 fusions curated by TCGA Fusion Gene Database and reveals 270 novel occurrences, all of which are present as tumor-specific. By providing a reference-free, alignment-free, and parameter-free sequence search system, SeqOthello will enable large-scale integrative studies using sequence-level data, an undertaking not previously practicable for many individual labs.

Effects Of Red Clover Isoflavones On Tall Fescue Seed Fermentation And Microbial Populations In Vitro, Emily A. Melchior, Jason K. Smith, Liesel G. Schneider, J. Travis Mulliniks, Gary E. Bates, Zachary D. Mcfarlane, Michael D. Flythe, James L. Klotz, Jack P. Goodman, Huihua Ji, Phillip R. Myer

Plant and Soil Sciences Faculty Publications

Negative impacts of endophyte-infected Lolium arundinaceum (Darbyshire) (tall fescue) are responsible for over $2 billion in losses to livestock producers annually. While the influence of endophyte-infected tall fescue has been studied for decades, mitigation methods have not been clearly elucidated. Isoflavones found in Trifolium pratense (red clover) have been the subject of recent research regarding tall fescue toxicosis mitigation. Therefore, the aim of this study was to determine the effect of ergovaline and red clover isoflavones on rumen microbial populations, fiber degradation, and volatile fatty acids (VFA) in an in vitro system. Using a dose of 1.10 mg × L …

Frequency-Dependent Photothermal Measurement Of Thermal Diffusivity For Opaque And Non-Opaque Materials: Application To Crystals Of Tips-Pentacene, Maryam Shahi, Joseph W. Brill

Physics and Astronomy Faculty Publications

We propose the use of a frequency-dependent photothermal measurement as a complement to light-flash, i.e., time-dependent, measurements to determine the through-plane thermal diffusivity of small, thin samples, e.g., semiconducting polymers and small organic molecule crystals. The analysis is extended from its previous use with some opaque conducting polymers to materials with finite absorption coefficients, such as crystals of 6,13-bis(triisopropylsilylethynyl)pentacene. Taking into account the finite absorption coefficients of the latter gives a value of diffusivity, D ≈ 0.10 mm²/s, much smaller than previously estimated and more consistent with its expected value. We also briefly discuss the effects of coating …

Liquid Phenothiazine Catholytes For Non-Aqueous Redox Flow Batteries, Susan A. Odom, Matthew D. Casselman, Aman Preet Kaur

Chemistry Faculty Patents

Highly soluble, liquid phenothiazines containing methoxy-terminated ether and oligoether substituents are disclosed with high diffusion coefficients and robust performance in electrochemical measurements, which can be synthesized in one step from commercially-available starting materials, thereby circumventing previous synthetic limitations.

All Tree Level Scattering Amplitudes In Chern-Simons Theories With Fundamental Matter, Karthik Inbasekar, Sachin Jain, Pranjal Nayak, V. Umesh

Physics and Astronomy Faculty Publications

We show that Britto-Cachazo-Feng-Witten (BCFW) recursion relations can be used to compute all tree level scattering amplitudes in terms of 2 → 2 scattering amplitude in U(N) 𝒩 = 2 Chern-Simons (CS) theory coupled to matter in the fundamental representation. As a by-product, we also obtain a recursion relation for the CS theory coupled to regular fermions, even though in this case standard BCFW deformations do not have a good asymptotic behavior. Moreover, at large N, 2 → 2 scattering can be computed exactly to all orders in ’t Hooft coupling as was done in earlier works …

Photocatalytic Activity: Experimental Features To Report In Heterogeneous Photocatalysis, Md. Ariful Hoque, Marcelo I. Guzman

Chemistry Faculty Publications

Heterogeneous photocatalysis is a prominent area of research with major applications in solar energy conversion, air pollution mitigation, and removal of contaminants from water. A large number of scientific papers related to the photocatalysis field and its environmental applications are published in different journals specializing in materials and nanomaterials. However, many problems exist in the conception of papers by authors unfamiliar with standard characterization methods of photocatalysts as well as with the procedures needed to determine photocatalytic activities based on the determination of “apparent quantum efficiencies” within a wavelength interval or “apparent quantum yields” in the case of using monochromatic …

Nonperturbatively Renormalized Glue Momentum Fraction At The Physical Pion Mass From Lattice Qcd, Yi-Bo Yang, Ming Gong, Jian Liang, Huey-Wen Lin, Keh-Fei Liu, Dimitra Pefkou, Phiala Shanahan

Physics and Astronomy Faculty Publications

We present the first nonperturbatively renormalized determination of the glue momentum fraction ⟨x⟩_g in the nucleon, based on lattice-QCD simulations at the physical pion mass using the cluster-decomposition error reduction technique. We provide the first practical strategy to renormalize the gauge energy-momentum tensor nonperturbatively in the regularization-independent momentum-subtraction (RI/MOM) scheme and convert the results to the MS¯ scheme with one-loop matching. The simulation results show that the cluster-decomposition error reduction technique can reduce the statistical uncertainty of its renormalization constant by a factor of O(300) in calculations using a typical state-of-the-art lattice volume, and the nonperturbatively …

Collision Energy Dependence Of Moments Of Net-Kaon Multiplicity Distributions At Rhic, L. Adamczyk, J. R. Adams, James K. Adkins, G. Agakishiev, M. M. Aggarwal, Z. Ahammed, N. N. Ajitanand, I. Alekseev, D. M. Anderson, R. Aoyama, A. Aparin, D. Arkhipkin, E. C. Aschenauer, M. U. Ashraf, A. Attri, G. S. Averichev, X. Bai, V. Bairathi, K. Barish, A. Behera, R. Bellwied, A. Bhasin, A. K. Bhati, P. Bhattarai, J. Bielcik, J. Bielcikova, L. C. Bland, I. G. Bordyuzhin, J. Bouchet, J. D. Brandenburg, Renee H. Fatemi, Suvarna Ramachandran

Physics and Astronomy Faculty Publications

Fluctuations of conserved quantities such as baryon number, charge, and strangeness are sensitive to the correlation length of the hot and dense matter created in relativistic heavy-ion collisions and can be used to search for the QCD critical point. We report the first measurements of the moments of net-kaon multiplicity distributions in Au+Au collisions at √s_NN=7.7, 11.5, 14.5, 19.6, 27, 39, 62.4, and 200 GeV. The collision centrality and energy dependence of the mean (M), variance (σ²), skewness (S), and kurtosis (κ) for net-kaon multiplicity distributions as well …

Quark Spins And Anomalous Ward Identity, Jian Liang, Yi-Bo Yang, Terrence Draper, Ming Gong, Keh-Fei Liu

Physics and Astronomy Faculty Publications

We calculate the intrinsic quark spin contribution to the total proton spin using overlap valence quarks on three ensembles of 2 + 1-flavor RBC/UKQCD domain-wall configurations with different lattice spacings. The lowest pion mass of the ensembles is around 171 MeV, which is close to the physical point. With overlap fermions and a topological charge derived from the overlap operator, we verify the anomalous Ward identity between nucleon states with momentum transfer. Both the connected and the disconnected insertions of the axial-vector current are calculated. For the disconnected-insertion part, the cluster-decomposition error reduction technique is utilized for the lattice with …

Measurement Of Unpolarized And Polarized Cross Sections For Deeply Virtual Compton Scattering On The Proton At Jefferson Laboratory With Clas, N. Hirlinger Saylor, B. Guegan, V. D. Burkert, L. Elouadrhiri, M. Garçon, F. X. Girod, M. Guidal, H. S. Jo, V. Kubarovsky, S. Niccolai, P. Stoler, K. P. Adhikari, S. Adhikari, Z. Akbar, M. J. Amaryan, S. Anefalos Pereira, J. Ball, I. Balossino, N. A. Baltzell, L. Barion, M. Battaglieri, V. Batourine, I. Bedlinskiy, A. S. Biselli, S. Boiarinov, W. J. Briscoe, W. K. Brooks, S. Bültmann, F. Cao, S. Carman, Wesley P. Gohn

Physics and Astronomy Faculty Publications

This paper reports the measurement of polarized and unpolarized cross sections for the ep → e′ p′ γ reaction, which is composed of deeply virtual Compton scattering (DVCS) and Bethe-Heitler (BH) processes, at an electron beam energy of 5.88 GeV at the Thomas Jefferson National Accelerator Facility using the Large Acceptance Spectrometer CLAS. The unpolarized cross sections and polarized cross section differences have been measured over broad kinematics, 0.10 < x_B < 0.58, 1.0 < Q² < 4.8GeV², and 0.09 < −t < 2.00GeV². The results are found to be consistent with previous CLAS data, and these new data are discussed in …

On Robust Colorings Of Hamming-Distance Graphs, Isaiah Harney, Heide Gluesing-Luerssen

Mathematics Faculty Publications

H_q(n, d) is defined as the graph with vertex set Zⁿ_q and where two vertices are adjacent if their Hamming distance is at least d. The chromatic number of these graphs is presented for various sets of parameters (q, n, d). For the 4-colorings of the graphs H₂(n, n − 1) a notion of robustness is introduced. It is based on the tolerance of swapping colors along an edge without destroying properness of the coloring. An explicit description of the maximally robust 4-colorings of …