Physical Sciences and Mathematics Commons^™

Receiver Function Analyses Of Uturuncu Volcano, Bolivia And Vicinity, Heather Mcfarlin, Douglas Christensen, Stephen R. Mcnutt, Kevin M. Ward, Jamie Ryan, George Zandt, Glenn Thompson

School of Geosciences Faculty and Staff Publications

Uturuncu volcano, located near the borders of Chile and Bolivia in the Central Andes, has been identified as one of two volcanoes in the region with large-scale and active, yet decelerating, inflation. A large low-velocity zone named the Altiplano-Puna magma body (APMB) has been shown to feed magma to Uturuncu and is thought to be a source of the deformation occurring here. The international, multidisciplinary PLUTONS project deployed 28 broadband seismic sensors in a 90 km by 90 km region around and on Uturuncu volcano between April 2010 and October 2012. Over 800 teleseismic receiver functions have been generated and …

Calibration-Free Spectrophotometric Measurements Of Carbonate Saturation States In Seawater, Erin E. Cuyler

USF Tampa Graduate Theses and Dissertations

This work describes efforts to improve methodologies and instrumentation for investigation of the marine CO₂ system. In the first section of my thesis, a method was developed that provides simple, calibration-free measurements of seawater carbonate saturation states (Ω_spec) based solely on the use of a laboratory spectrophotometer. Measurements of pH are made in paired optical cells, one with and one without added nitric acid. The amount of added nitric acid is determined through the direct proportionality between nitrate concentration and UV absorbance. After an initial calibration, the method is calibration-free and requires no volumetric or gravimetric analyses …

A Geophysical Model For The Origin Of Volcano Vent Clusters In A Colorado Plateau Volcanic Field, Fanghui Deng, Charles B. Connor, Rocco Malservisi, Laura J. Connor, Jeremy White, Aurélie Germa, Paul H. Wetmore

School of Geosciences Faculty and Staff Publications

Variation in spatial density of Quaternary volcanic vents, and the occurrence of vent clusters, correlates with boundaries in Proterozoic crust in the Springerville volcanic field (SVF), Arizona, USA. Inverse modeling using 538 gravity measurements shows that vent clusters correlate with gradients in the gravity field due to lateral variation in crustal density. These lateral discontinuities in the crustal density can be explained by boundaries in the North American crust formed during Proterozoic accretion. Spatial density of volcanic vents is low in regions of high‐density Proterozoic crust, high in areas of relatively low density Proterozoic crust, and is greatest adjacent to …

More Than Just Empty Space: Integrated Geoarchaeological Investigations Of The Crystal River Site (8ci1) Plaza, Alexander C. Delgado

USF Tampa Graduate Theses and Dissertations

Crystal River (8CI1) is a Woodland period archaeological site on the west-central Gulf Coast of Florida, famous for its diverse suite of exotic artifacts typical of the Hopewell Interaction Sphere, as well as its monumental shell mounds which surround a central plaza. Historically, these plazas are utilized as spaces for cultural expression, daily interactions between members of the community, economic exchanges, and discourse of all types. They also serve as a symbolic space, embodying social and political relations that are critical to the formation and maintenance of cultural identity. These spaces are challenging to study using conventional archaeological techniques since …

Sustainability Of Community-Managed Rural Water Supply Systems In Amazonas, Peru: Assessing Monitoring Tools And External Support Provision, Jacob E. Mangum

USF Tampa Graduate Theses and Dissertations

Globally, there is still a large number of people without access to safe drinking water; a known health risk. In rural areas of countries like Peru, when potable water systems are built the responsibility for maintaining these systems is given to volunteer water committees. Despite its prevalence as a management model, there is a consensus that community management alone cannot ensure sustainable water service. Therefore, the overall goal of this research is to assess the sustainability of community-managed water systems in rural areas of the department of Amazonas, Peru. Specifically, this research examines two mechanisms that have been shown to …

Formation Of Carbon-Carbon And Carbon-Hetero Bonds Through Gold Catalysis, Boliang Dong

USF Tampa Graduate Theses and Dissertations

This dissertation mainly contains two parts: one is C-X (C, O, S) bond formation through gold(I) catalysis, one is new applications via gold(I/III) redox catalysis.

In first part, gold(I) catalysts would be introduced and their general applications, then the TA-Au species will be emphasized including the design, synthesis, characters and their application in catalysis. The applications are well developed during the past decade in our group, but here only involves three examples regarding C-C, C-O and C-S bond formations. From these effective applications, the unique stability and reactivity of TA-Au will be studied and explained, which is the reason and …

Stable Isotopes In The Eye Lenses Of Doryteuthis Plei: Exploring Natal Origins And Migratory Patterns In The Eastern Gulf Of Mexico, Brenna A. Meath

USF Tampa Graduate Theses and Dissertations

Stable isotope analysis is an emerging tool to examine trophic pathways and migratory patterns of marine organisms. Squid are widely distributed in coastal and deep water regions of the Gulf of Mexico. Stable isotope ratios of carbon and nitrogen found within cephalopod tissues can provide information on both trophic level and habitat of their food sources. More recently, ontogenetic changes in stable isotope ratios within squid eye lenses have been documented. Concentric layers of crystallin proteins are added to the lens as the squid ages; the center of the lens contains the oldest layer and the youngest layers are on …

Giovanni Badino (1953-2017), Arrigo Cigna, Paolo Forti

International Journal of Speleology

Short obituary of Giovanni Badino.

Synthesis, In Vitro Characterization And Applications Of Novel 8-Aminoquinoline Fluorescent Probes, Adonis Mcqueen

USF Tampa Graduate Theses and Dissertations

Malaria is a parasitic disease that is caused by the plasmodium parasite. Plasmodium infection has affected man for thousands of years. With advances in drug discovery over the past century, malaria has evolved to possess resistance to most mainline therapeutics. This war of drug discovery vs plasmodium evolution continues to be fought to this very day, with attempts to eradicate malaria worldwide. Frontline treatments such as chloroquine, artemisinin, and atovaquone/proguanil have all seen parasitic resistance in strains of P. vivax as well as P. falciparum. While plasmodium possesses resistance to most classes of anti-malarials, the 8-aminoquinoline (8-AQ) class has …

Healthcare It In Skilled Nursing And Post-Acute Care Facilities: Reducing Hospital Admissions And Re-Admissions, Improving Reimbursement And Improving Clinical Operations, Scott L. Hopes

USF Tampa Graduate Theses and Dissertations

Health information technology (HIT), which includes electronic health record (EHR) systems and clinical data analytics, has become a major component of all health care delivery and care management. The adoption of HIT by physicians, hospitals, post-acute care organizations, pharmacies and other health care providers has been accepted as a necessary (and recently, a government required) step toward improved quality, care coordination and reduced costs: “Better coordination of care provides a path to improving communication, improving quality of care, and reducing unnecessary emergency room use and hospital readmissions. LTPAC providers play a critical role in achieving these goals” (HealthIT.gov, 2013).

Though …

Jahani Salt Diapir, Iran: Hydrogeology, Karst Features And Effect On Surroundings Environment, Mahmoud Abirifard, Ezzat Raeisi, Mehdi Zarei, Mohammad Zare, Michal Filippi, Jiří Bruthans, Christopher J. Talbot

International Journal of Speleology

The Jahani Salt Diapir (JSD), with an area of 54 km², is an active diapir in the Simply Folded Belt of the Zagros Orogeny, in the south of Iran. Most of the available studies on this diapir are focused on tectonics. The hydrogeology, schematic model of flow direction and hydrochemical effects of the JSD on the adjacent water resources are lacking, and thus, are the focus of this study. The morphology of the JSD was reevaluated by fieldwork and using available maps. The physicochemical characteristics of the springs and hydrometric stations were also measured. The vent of the …

Martian Cave Air-Movement Via Helmholtz Resonance, Kaj E. Williams, Timothy N. Titus, Chris H. Okubo, Glen E. Cushing

International Journal of Speleology

Infrasonic resonance has previously been measured in terrestrial caves by other researchers, where Helmholtz resonance has been suggested as the plausible mechanism resulting in periodic wind reversals within cave entrances. We extend this reasoning to possible Martian caves, where we examine the characteristics of four atypical pit craters (APCs) on Tharsis, suggested as candidate cave entrance locations. The results show that, for several possible cave air movement periods, we are able to infer the approximate cave volumes. The utility of inferring cave volumes for planetary cave exploration is discussed.

Role Of Viruses Within Metaorganisms: Ciona Intestinalis As A Model System, Brittany A. Leigh

USF Tampa Graduate Theses and Dissertations

Marine animals live and thrive in a literal sea of microorganisms, yet are often able to maintain specific associations that are largely dictated by the environment, host immunity and microbial interactions. Animal-associated microbiomes include bacteria and viruses that vastly outnumber host cells, especially in the gut environment, and are considered to be integral parts of healthy, functioning animals that act as a metaorganism. However, the processes underlying the initial establishment of these microbial communities are not very well understood. This dissertation focuses on the establishment of a well-known developmental animal model, Ciona intestinalis (sea squirt), to study the establishment and …

Enhancing The Internet Of Things Architecture With Flow Semantics, Allen Ronald Deserranno

USF Tampa Graduate Theses and Dissertations

Internet of Things (‘IoT’) systems are complex, asynchronous solutions often comprised of various software and hardware components developed in isolation of each other. These components function with different degrees of reliability and performance over an inherently unreliable network, the Internet. Many IoT systems are developed within silos that do not provide the ability to communicate or be interoperable with other systems and platforms. Literature exists on how these systems should be designed, how they should interoperate, and how they could be improved, but practice does not always consult literature.

The work brings together a proposed reference architecture for the IoT …

Statistical Analysis And Modeling Of Ovarian And Breast Cancer, Muditha V. Devamitta Perera

USF Tampa Graduate Theses and Dissertations

The objective of the present study is to investigate key aspects of ovarian and breast cancers, which are two main causes of mortality among women. Identification of the true behavior of survivorship and influential risk factors is essential in designing treatment protocols, increasing disease awareness and preventing possible causes of disease. There is a commonly held belief that African Americans have a higher risk of cancer mortality. We studied racial disparities of women diagnosed with ovarian cancer on overall and disease-free survival and found out that there is no significant difference in the survival experience among the three races: Whites, …

Veress M., 2016. Covered Karsts, Reza Khoshraftar

International Journal of Speleology

No abstract provided.

Lung Ct Radiomics: An Overview Of Using Images As Data, Samuel Hunt Hawkins

USF Tampa Graduate Theses and Dissertations

Lung cancer is the leading cause of cancer-related death in the United States and worldwide. Early detection of lung cancer can help improve patient outcomes, and survival prediction can inform plans of treatment. By extracting quantitative features from computed tomography scans of lung cancer, predictive models can be built that can achieve both early detection and survival prediction. To build these predictive models, first a detected lung nodule is segmented, then image features are extracted, and finally a model can be built utilizing image features to make predictions. These predictions can help radiologists improve cancer care.

Building predictive models based …

Catchment-Scale Alder Cover Controls Nitrogen Fixation In Boreal Headwater Streams, Daniel L. Hiatt, Caleb J. Robbins, Jeffrey A. Back, Pamela K. Kostka, Robert D. Doyle, Coowe M. Walker, Mark C. Rains, Dennis F. Whigham, Ryan S. King

School of Geosciences Faculty and Staff Publications

Alder (Alnus spp.) is a woody plant with bacterial symbionts that fix atmospheric N2into bioavailable N. We studied 12 North American boreal headwater streams spanning a steep gradient of catchment alder cover (0–27%) to test the hypothesis that increasing inputs of inorganic N associated with increasing alder cover would reduce or eliminate in-stream benthic N2 fixation. We measured N2 fixation rates, chlorophyll a, and ash-free dry mass (AFDM) of periphyton in early (May) and late (August) summer 2011. Dissolved inorganic N (DIN) concentrations, composed almost entirely of NO3/NO2-N, ranged from below detection limits to nearly 2 mg/L and …

Nuisance Flooding And Relative Sea-Level Rise: The Importance Of Present-Day Land Motion, Makan A. Karegar, Timothy H. Dixon, Rocco Malservisi, Jurgen Kusche, Simon E. Engelhart

School of Geosciences Faculty and Staff Publications

Sea-level rise is beginning to cause increased inundation of many low-lying coastal areas. While most of Earth’s coastal areas are at risk, areas that will be affected first are characterized by several additional factors. These include regional oceanographic and meteorological effects and/or land subsidence that cause relative sea level to rise faster than the global average. For catastrophic coastal flooding, when wind-driven storm surge inundates large areas, the relative contribution of sea-level rise to the frequency of these events is difficult to evaluate. For small scale “nuisance flooding,” often associated with high tides, recent increases in frequency are more clearly …

Antarctic Ice Sheet Slope And Aspect Based On Icesat's Repeat Orbit Measurement, L. Yuan, F. Li, S. Zhang, Surui Xie, F. Xiao, T. Zhu, Y. Zhang

School of Geosciences Student Publications

Accurate information of ice sheet surface slope is essential for estimating elevation change by satellite altimetry measurement. A study is carried out to recover surface slope of Antarctic ice sheet from Ice, Cloud and land Elevation Satellite (ICESat) elevation measurements based on repeat orbits. ICESat provides repeat ground tracks within 200 meters in cross-track direction and 170 meters in along-track direction for most areas of Antarctic ice sheet. Both cross-track and along-track surface slopes could be obtained by adjacent repeat ground tracks. Combining those measurements yields a surface slope model with resolution of approximately 200 meters. An algorithm considering elevation …

Anthropogenic Infilling Of A Bermudian Sinkhole And Its Impact On Sedimentation And Benthic Foraminifera In The Adjacent Anchialine Cave Environment, Jacquelyn N. Cresswell, Peter J. Van Hengstum, Thomas M. Iliffe, Bruce E. Williams, Gil Nolan

International Journal of Speleology

In the mid-20^th century, an inland brackish pond from Bermuda, known as Eve’s Pond, was filled with marine sediment from an adjacent coastal lagoon. At this time, an eyewitness reported “…sediment billowing out of the Green Bay Cave for days…”, which is a marine-dominated anchialine cave located proximal to the former location of Eve’s Pond (~200 m). The purpose of this study was to evaluate the potential impact of this infilling event on cave sedimentation and benthic meiofaunal communities, as proxied by the unicellular protists foraminifera that remain preserved in the sediment record. Eight sediment cores were collected from …

Differential Preservation Of Vertebrates In Southeast Asian Caves, Julien Louys, Shimona Kealy, Sue O'Connor, Gilbert J. Price, Stuart Hawkins, Ken Aplin, Yan Rizal, Jahdi Zaim, Mahirta, Daud A. Tanudirjo, Wahyu Dwijo Santoso, Ati Rati Hidayah, Agus Trihascaryo, Rachel Wood, Joseph Bevitt, Tara Clark

International Journal of Speleology

Caves have been an important source of vertebrate fossils for much of Southeast Asia, particularly for the Quaternary. Despite this importance, the mechanisms by which vertebrate remains accumulate and preserve in Southeast Asian caves has never been systematically reviewed or examined. Here, we present the results of three years of cave surveys in Indonesia and Timor-Leste, describing cave systems and their attendant vertebrate accumulations in diverse geological, biogeographical, and environmental settings. While each cave system is unique, we find that the accumulation and preservation of vertebrate remains are highly dependent on local geology and environment. These factors notwithstanding, we find …

Towards Food Service Sustainability In Suburban Environments By Optimally Locating Shared Anaerobic Digester Units, Rebecca Loraamm, Joni Downs, Robert Alonso Bair, Daniel Yeh

Suburban Sustainability

Anaerobic digestion is an effective method for reducing food waste at the consumer level. Drawbacks associated with this strategy include high construction costs for multiple digester units and limited public awareness of the method’s commercial potential. Given the large scale problem of food waste, an approach establishing community partnerships between local businesses and primary schools is offered to combat the problem of food waste. Optimizing the placement of shared digester units enabling utilization by multiple stakeholders is the suggested mitigation method. This research explores application of the p-median problem to determine the set of optimal sites for shared anaerobic digester …

The Significant Surface-Water Connectivity Of “Geographically Isolated Wetlands”, Aram J. K. Calhoun, David M. Mushet, Laurie C. Alexander, Edward S. Dekeyser, Laurie Fowler, Charles R. Lane, Megan W. Lang, Mark C. Rains, Stephen C. Richter, Susan C. Walls

School of Geosciences Faculty and Staff Publications

We evaluated the current literature, coupled with our collective research expertise, on surface-water connectivity of wetlands considered to be “geographically isolated” (sensu Tiner Wetlands 23:494–516, 2003a) to critically assess the scientific foundation of grouping wetlands based on the singular condition of being surrounded by uplands. The most recent research on wetlands considered to be “geographically isolated” shows the difficulties in grouping an ecological resource that does not reliably indicate lack of surface water connectivity in order to meet legal, regulatory, or scientific needs. Additionally, the practice of identifying “geographically isolated wetlands” based on distance from a stream can …

Acquisition Of A 3 Min, Two-Dimensional Glacier Velocity Field With Terrestrial Radar Interferometry, Denis Voytenko, Timothy H. Dixon, David M. Holland, Ryan Cassotto, Ian M. Howat, Mark A. Fahnestock, Martin Truffer, Santiago De La Pena

School of Geosciences Faculty and Staff Publications

Outlet glaciers undergo rapid spatial and temporal changes in flow velocity during calving events. Observing such changes requires both high temporal and high spatial resolution methods, something now possible with terrestrial radar interferometry. While a single such radar provides line-of-sight velocity, two radars define both components of the horizontal flow field. To assess the feasibility of obtaining the two-dimensional (2-D) flow field, we deployed two terrestrial radar interferometers at Jakobshavn Isbrae, a major outlet glacier on Greenland's west coast, in the summer of 2012. Here, we develop and demonstrate a method to combine the line-of-sight velocity data from two synchronized …

Mantle Dynamics Beneath The Discrete And Diffuse Plate Boundaries Of The Juan De Fuca Plate: Results From Cascadia Initiative Body Wave Tomography, Joseph S. Byrnes, Douglas R. Toomey, Emilie E. E. Hooft, John Nábělek, Jochen Braunmiller

School of Geosciences Faculty and Staff Publications

We use the delay times of teleseismic S phases recorded by ocean bottom seismometers during the plate‐scale Cascadia Initiative community experiment to constrain the heterogeneity of seismic velocity structure beneath young oceanic lithosphere. Our study area covers the entire Juan de Fuca (JdF) and Gorda plates, from their creation at the JdF and Gorda Ridges to their subduction beneath the North American continent, and the entire length of the Blanco transform fault. The range of the observed Vs anomalies requires variations in the melt fraction of the asthenosphere. The data require that low Vsanomalies extend to depths of at …

Slow Slip Events In The Early Part Of The Earthquake Cycle, Nicholas K. Voss, Rocco Malservisi, Timothy H. Dixon, Marino Protti

School of Geosciences Faculty and Staff Publications

In February 2014 a Mw = 7.0 slow slip event (SSE) took place beneath the Nicoya Peninsula, Costa Rica. This event occurred 17 months after the 5 September 2012, Mw = 7.6, earthquake and along the same subduction zone segment, during a period when significant postseismic deformation was ongoing. A second SSE occurred in the middle of 2015, 21 months after the 2014 SSE and 38 months after the earthquake. The recurrence interval for Nicoya SSEs was unchanged by the earthquake. However, the spatial distribution of slip for the 2014 event differed significantly from previous events, having only …

Parts Of The Whole: Why I Teach This Subject This Way, Dorothy Wallace

Numeracy

The importance of mathematics to biology is illustrated by search data from Google Scholar. I argue that a pedagogical approach based on student research projects is likely to improve retention and foster critical thinking about mathematical modeling, as well as reinforce quantitative reasoning and the appreciation of calculus as a tool. The usual features of a course (e.g., the instructor, assessment, text, etc.) are shown to have very different purposes in a research-based course.

Lewis Carroll And Mathematical Ideals Of John Allen Paulos: Review Of Alice's Adventures In Wonderland (1865) And Through The Looking-Glass, And What Alice Found There (1871), Paul H. Grawe

Numeracy

At first blush it may seem that linking the acclaimed achievements of John Allen Paulos and the acclaimed achievements of Lewis Carroll (a.k.a. Oxford mathematics don Charles Lutwidge Dodgson) is merely an exercise in free association. Both are prestigious academic mathematicians. Both have an obvious interest in humor. Both have made it to best-seller lists.

That free association, however, is not the issue here. Instead, the issue is whether John Allen Paulos has highlighted basic questions of mathematical literacy and whether the issues that Paulos highlights do not, in fact, reflect mathematical and artistic concerns of Lewis Carroll in writing …

Rethinking The Numerate Citizen: Quantitative Literacy And Public Issues – Discussion, Kira H. Hamman

Numeracy

I dispute Erickson's claim in Numeracy 9(2), Article 4 (2016), that quantitative literacy is neither necessary nor appropriate for informed citizenship, and explore his suggestion that Hardwig's notion of epistemic dependence is more suited to the task.