Physical Sciences and Mathematics Commons^™

A High-Latitude, Mesophotic Cycloseris Field At 85 M Depth Off Rapa Nui (Easter Island), Bert W. Hoeksema, Javier Sellanes, Erin E. Easton

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Published records of mesophotic zooxanthellate corals from Rapa Nui (Easter Island) are rare and so far based only on dredged specimens and observations during scuba dives (Wells 1972, Glynn et al. 2003, 2007). During recent remotely operated vehicle (ROV) surveys off Rapa Nui (March 2016), a large and dense aggregation of zooxanthellate Cycloseris corals (Scleractinia: Fungiidae) with a density of approximately 500 ind m−2 was discovered (27°08΄55˝S, 109°26΄46˝W) on black sand in a depth range of approximately 79–85 m (Panels A, B). A few corals were overturned, exposing their white (azooxanthellate) undersides and sutures along which self-fragmentation took place (Panel …

Elf3 Is An Antagonist Of Oncogenic-Signalling-Induced Expression Of Emt-Tf Zeb1, D Liu, Y Skomorovska, J Song, E Bowler, R Harris, R Ravasz, S Bai, Marzieh Ayati, K Tamai, Mehmet Koyuturk

Computer Science Faculty Publications and Presentations

Background: Epithelial-to-mesenchymal transition (EMT) is a key step in the transformation of epithelial cells into migratory and invasive tumour cells. Intricate positive and negative regulatory processes regulate EMT. Many oncogenic signalling pathways can induce EMT, but the specific mechanisms of how this occurs, and how this process is controlled are not fully understood.

Methods: RNA-Seq analysis, computational analysis of protein networks and large-scale cancer genomics datasets were used to identify ELF3 as a negative regulator of the expression of EMT markers. Western blotting coupled to siRNA as well as analysis of tumour/normal colorectal cancer panels was used to …

Full Tilt: Universal Constructors For General Shapes With Uniform External Forces, Jose Balanza-Martinez, Austin Luchsinger, David Caballero, Rene Reyes, Angel A. Cantu, Robert Schweller, Luis Angel Garcia, Tim Wylie

Computer Science Faculty Publications and Presentations

We investigate the problem of assembling general shapes and patterns in a model in which particles move based on uniform external forces until they encounter an obstacle. In this model, corresponding particles may bond when adjacent with one another. Succinctly, this model considers a 2D grid of “open” and “blocked” spaces, along with a set of slidable polyominoes placed at open locations on the board. The board may be tilted in any of the 4 cardinal directions, causing all slidable polyominoes to move maximally in the specified direction until blocked. By successively applying a sequence of such tilts, along with …

Measuring, Mapping And Quantifying The Effects Of Trust And Informal Communication On Transboundary Collaboration In The Great Lakes Fisheries Policy Network, Andrew M. Song, Owen Temby, Dongkyu Kim, Angel Saavedra Cisneros, Gordon M. Hickey

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Ecosystem-based management of fisheries and other transboundary natural resources require a number of organizations across jurisdictions to exchange knowledge, coordinate policy goals and engage in collaborative activities. Trust, as part of social capital, is considered a key mechanism facilitating the coordination of such inter-organizational policy networks. However, our understanding of multi-dimensional trust as a theoretical construct and an operational variable in environmental and natural resource management has remained largely untested. This paper presents an empirical assessment of trust and communication measures applied to the North American Great Lakes fisheries policy network. Using a scale-based method developed for this purpose, we …

Kinetic Pathways Of Topology Simplification By Type-Ii Topoisomerases In Knotted Supercoiled Dna, Riccardo Ziraldo, Andreas Hanke, Stephen D. Levene

Physics and Astronomy Faculty Publications and Presentations

The topological state of covalently closed, double-stranded DNA is defined by the knot type $K$ and the linking-number difference $\\Delta Lk$ relative to unknotted relaxed DNA. DNA topoisomerases are essential enzymes that control the topology of DNA in all cells. In particular, type-II topoisomerases change both $K$ and $\\Delta Lk$ by a duplex-strand-passage mechanism and have been shown to simplify the topology of DNA to levels below thermal equilibrium at the expense of ATP hydrolysis. It remains a key question how small enzymes are able to preferentially select strand passages that result in topology simplification in much larger DNA molecules. …

Properties Of The Binary Neutron Star Merger Gw170817, B. P. Abbott, R. Abbott, T. D. Abbott, F. Acernese, K. Ackley, C. Adams, T. Adams, P. Addesso, R. X. Adhikari, V. B. Adya, C. Affeldt, B. Agarwal, M. Agathos, K. Agatsuma, N. Aggarwal, O. D. Aguiar, L. Aiello, A. Ain, P. Ajith, B. Allen, G. Allen, A. Allocca, M. A. Aloy, P. A. Altin, A. Amato, A. Ananyeva, S. B. Anderson, W. G. Anderson, S. V. Angelova, S. Antier

Physics and Astronomy Faculty Publications and Presentations

On August 17, 2017, the Advanced LIGO and Advanced Virgo gravitational-wave detectors observed a low-mass compact binary inspiral. The initial sky localization of the source of the gravitational-wave signal, GW170817, allowed electromagnetic observatories to identify NGC 4993 as the host galaxy. In this work, we improve initial estimates of the binary's properties, including component masses, spins, and tidal parameters, using the known source location, improved modeling, and recalibrated Virgo data. We extend the range of gravitational-wave frequencies considered down to 23 Hz, compared to 30 Hz in the initial analysis. We also compare results inferred using several signal models, which …

Eigenstates Transition Without Undergoing An Adiabatic Process, Fatemeh Mostafavi, Luqi Yuan, Hamidreza Ramezani

Physics and Astronomy Faculty Publications and Presentations

We introduce a class of non-Hermitian Hamiltonians that offers a dynamical approach to a shortcut to adiabaticity (DASA). In particular, in our proposed 2 × 2 Hamiltonians, one eigenvalue is absolutely real and the other one is complex. This specific form of eigenvalues helps us to exponentially decay the population in an undesired eigenfunction or amplify the population in the desired state while keeping the probability amplitude in the other eigenfunction conserved. This provides us with a powerful method to have a diabatic process with the same outcome as its corresponding adiabatic process. In contrast to standard shortcuts to adiabaticity, …

Tests Of General Relativity With Gw170817, B. P. Abbott, R. Abbott, Teviet Creighton, Mario C. Diaz, Soma Mukherjee, Volker Quetschke, Malik Rakhmanov, K. E. Ramirez, Robert Stone, D. Tuyenbayev, W. H. Wang

Physics and Astronomy Faculty Publications and Presentations

The recent discovery by Advanced LIGOand AdvancedVirgo of a gravitational wave signal from a binary neutron star inspiral has enabled tests of general relativity (GR) with this new type of source. This source, for the first time, permits tests of strong-field dynamics of compact binaries in the presence of matter. In this Letter, we place constraints on the dipole radiation and possible deviations from GR in the post-Newtonian coefficients that govern the inspiral regime. Bounds on modified dispersion of gravitational waves are obtained; in combination with information from the observed electromagnetic counterpart we can also constrain effects due to large …

Search For Transient Gravitational-Wave Signals Associated With Magnetar Bursts During Advanced Ligo’S Second Observing Run, B. P. Abbott, R. Abbott, Teviet Creighton, Mario C. Diaz, Soma Mukherjee, Volker Quetschke, K. E. Ramirez, Malik Rakhmanov, Satzhan Sitmukhambetov, Robert Stone

Physics and Astronomy Faculty Publications and Presentations

We present the results of a search for short- and intermediate-duration gravitational-wave signals from four magnetar bursts in Advanced LIGO’s second observing run. We find no evidence of a signal and set upper bounds on the root sum squared of the total dimensionless strain (hrss) from incoming intermediate-duration gravitational waves ranging from 1.1 × 10−22 at 150 Hz to 4.4 × 10−22 at 1550 Hz at 50% detection efficiency. From the known distance to the magnetar SGR 1806–20 (8.7 kpc), we can place upper bounds on the isotropic gravitational-wave energy of 3.4 × 10^-44 erg at 150 Hz assuming optimal …

Narrow-Band Search For Gravitational Waves From Known Pulsars Using The Second Ligo Observing Run, B. P. Abbott, B. Abbott, Teviet Creighton, Mario C. Diaz, Soma Mukherjee, D. Tuyenbayev, Volker Quetschke, Malik Rakhmanov, K. E. Ramirez, Satzhan Sitmukhambetov, Robert Stone, A. K. Zadrozny

Physics and Astronomy Faculty Publications and Presentations

Isolated spinning neutron stars, asymmetric with respect to their rotation axis, are expected to be sources of continuous gravitational waves. The most sensitive searches for these sources are based on accurate matched filtering techniques that assume the continuous wave to be phase locked with the pulsar beamed emission. While matched filtering maximizes the search sensitivity, a significant signal-to-noise ratio loss will happen in the case of a mismatch between the assumed and the true signal phase evolution. Narrowband algorithms allow for a small mismatch in the frequency and spin-down values of the pulsar while coherently integrating the entire dataset. In …

Tuning The Reactivity Of Nanoenergetic Gas Generators Based On Bismuth And Iodine Oxidizers, Mkhitar A. Hobosyan, Karen S. Martirosyan

Physics and Astronomy Faculty Publications and Presentations

There is a growing interest on novel energetic materials called Nanoenergetic Gas- Generators (NGGs) which are potential alternatives to traditional energetic materials including pyrotechnics, propellants, primers and solid rocket fuels. NGGs are formulations that utilize metal powders as a fuel and oxides or hydroxides as oxidizers that can rapidly release large amount of heat and gaseous products to generate shock waves. The heat and pressure discharge, impact sensitivity, long term stability and other critical properties depend on the particle size and shape, as well as assembling procedure and intermixing degree between the components. The extremely high energy density and the …

Sweet Potato: A Potentially Profitable Summer Crop For South Texas Organic Farmers To Enhance Soil Biological Activity And Nutrient Release, Jahdiel Salazar, Josabeth Navarro, James Jihoon Kang, Engil Isadora Pujol Pereira

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

No abstract provided.

Digital Transformation Through Internet Of Things Services, Tayfun Keskin, Frederick J. Riggins

Information Systems Faculty Publications and Presentations

Internet of Things (IoT) have been disrupting industries through shifting novel services, and business models. Organizations should also redesign their business service models to navigate this disruption. A holistic understanding of digital transformation through IoT requires the cooperation of multiple disciplines ranging from engineering to economics. This paper utilizes a conceptual model to develop an analytical framework to investigate a number of pricing strategies enabled by different business models. Our findings demonstrate that the Internet of Things phenomenon has the potential to disrupt the way we do business by connecting markets and enabling new business models.

Complete Mitochondrial Genome Of Callogorgia Cf. Gracilis (Octocorallia: Calcaxonia: Primnoidae), Erin E. Easton, David Hicks

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

We report the first complete mitochondrial genome of Callogorgia. Callogorgia cf. gracilis isolate DFH32_518B was collected by a remotely operated vehicle at 98 m on McGrail Bank (27.9840725°N, 92.604242°W). The complete mitogenome is 18,937 bp (27.8% A, 18.3% C, 19.8% G, and 34.1% T) and has the ancestral octocoral gene order for its 14 protein-coding genes, two rRNA genes, and one tRNA gene. It is sister to and ∼96.6% similar (uncorrected) to Narella hawaiiensis, the only other complete mitogenome reported for Primnoidae. The cox1 + igr1 + mtMutS region differs by two base pairs (0.12%) from the only reported …

Rapidly Expanding Nuclear Arsenals In Pakistan And India Portend Regional And Global Catastrophe, Owen B. Toon, Charles G. Bardeen, Alan Robock, Lili Xia, Hans Kristensen, Matthew Mckinzie, R. J. Peterson, Cheryl S. Harrison, Nicole S. Lovenduski, Richard P. Turco

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Pakistan and India may have 400 to 500 nuclear weapons by 2025 with yields from tested 12- to 45-kt values to a few hundred kilotons. If India uses 100 strategic weapons to attack urban centers and Pakistan uses 150, fatalities could reach 50 to 125 million people, and nuclear-ignited fires could release 16 to 36 Tg of black carbon in smoke, depending on yield. The smoke will rise into the upper troposphere, be self-lofted into the stratosphere, and spread globally within weeks. Surface sunlight will decline by 20 to 35%, cooling the global surface by 2° to 5°C and reducing …

Past, Present, And Future Perspectives Of Environmental Dna (Edna) Metabarcoding: A Systematic Review In Methods, Monitoring, And Applications Of Global Edna, Krista M. Ruppert, Richard J. Kline, Md. Saydur Rahman

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity wherein samples are taken from the environment via water, sediment or air from which DNA is extracted, and then amplified using general or universal primers in polymerase chain reaction and sequenced using next-generation sequencing to generate thousands to millions of reads. From this data, species presence can be determined, and overall biodiversity assessed. It is an interdisciplinary method that brings together traditional fieldbased ecology with in-depth molecular methods and advanced computational tools. As an emerging monitoring method, there are many pitfalls and roadblocks to be considered and avoided, but …

Continued Eastward Range Expansion Of Black Phoebes (Sayornis Nigricans) In Southernmost Texas, Samuel G. Ortiz, Christopher A. Gabler, Timothy Brush

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

ABSTRACT—We observed black phoebe (Sayornis nigricans) nests, breeding pairs, and juveniles in Cameron County, Texas, in 2017. Our first confirmed nesting records in Cameron County document a continued eastward range expansion by black phoebes.

RESUMEN—En el 2017, observamos nidos, parejas reproductoras y juveniles del pajaro mosquero negro (Sayornis nigricans) en el condado de Cameron, Texas. Los primeros registros confirmados de reproducci ´on en el condado de Cameron son evidencia de una continua expansion hacia el este de la distribuci ´on geogr´afica del mosquero negro.

Search For Gravitational Waves From A Long-Lived Remnant Of The Binary Neutron Star Merger Gw170817, B. P. Abbott, B. Abbott, Teviet Creighton, Mario C. Diaz, Volker Quetschke, Malik Rakhmanov, K. E. Ramirez, Robert Stone, D. Tuyenbayev, W. H. Wang

Physics and Astronomy Faculty Publications and Presentations

One unanswered question about the binary neutron star coalescence GW170817 is the nature of its post-merger remnant. A previous search for post-merger gravitational waves targeted high-frequency signals from a possible neutron star remnant with a maximum signal duration of 500 s. Here, we revisit the neutron star remnant scenario and focus on longer signal durations, up until the end of the second Advanced LIGO-Virgo observing run, which was 8.5 days after the coalescence of GW170817. The main physical scenario for this emission is the power-law spindown of a massive magnetar-like remnant. We use four independent search algorithms with varying degrees …

Constraining The P-Mode–G-Mode Tidal Instability With Gw170817, B. P. Abbott, R. Abbott, Teviet Creighton, Mario C. Diaz, Soma Mukherjee, D. Tuyenbayev, Volker Quetschke, Malik Rakhmanov, K. E. Ramirez, Robert Stone, W. H. Wang

Physics and Astronomy Faculty Publications and Presentations

We analyze the impact of a proposed tidal instability coupling p modes and g modes within neutron stars on GW170817. This nonresonant instability transfers energy fromthe orbit of the binary to internal modes of the stars, accelerating the gravitational-wave driven inspiral.We model the impact of this instability on the phasing of the gravitational wave signal using three parameters per star: an overall amplitude, a saturation frequency, and a spectral index. Incorporating these additional parameters, we compute the Bayes factor (lnBpg !pg) comparing our p-g model to a standard one. We find that the observed signal is consistent with waveform models …

All-Sky Search For Long-Duration Gravitational-Wave Transients In The Second Advanced Ligo Observing Run, B. P. Abbott, R. Abbott, Teviet Creighton, Mario C. Diaz, Soma Mukherjee, Malik Rakhmanov, K. E. Ramirez, Satzhan Sitmukhambetov, Robert Stone, D. Tuyenbayev, W. H. Wang, A. K. Zadrozny

Physics and Astronomy Faculty Publications and Presentations

We present the results of a search for long-duration gravitational-wave transients in the data from the Advanced LIGO second observation run; we search for gravitational-wave transients of 2–500 s duration in the 24–2048 Hz frequency band with minimal assumptions about signal properties such as waveform morphologies, polarization, sky location or time of occurrence. Signal families covered by these search algorithms include fallback accretion onto neutron stars, broadband chirps from innermost stable circular orbit waves around rotating black holes, eccentric inspiral-merger-ringdown compact binary coalescence waveforms, and other models. The second observation run totals about 118.3 days of coincident data between November …

On The Regularity Radius Of Delone Sets In R3, Nikolay Dolbilin, Alexey Garber, Undine Leopold, Egon Schulte

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

We complete the proof of the upper bound ρ^3≤10R for the regularity radius of Delone sets in three-dimensional Euclidean space. Namely, summing up the results obtained earlier, and adding the missing cases, we show that if all 10R-clusters of a Delone set X with parameters (r,R) are equivalent, then X is a regular system.

Blocks In The Category Of Finite-Dimensional Representations Of Principal W-Algebra For Q(2), Elena Poletaeva

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

We describe the blocks in the category of finite-dimensional representations of the principal finite W-algebra for the Lie superalgebra Q(2).

Voronoi Conjecture For Five-Dimensional Parallelohedra, Alexey Garber, Alexander Magazinov

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

We prove the Voronoi conjecture for five-dimensional parallelohedra. Namely, we show that if a convex five-dimensional polytope P tiles R5 with translations, then P is an affine image of the Dirichlet-Voronoi cell for a five-dimensional lattice.

Connections Between Pre-Service Teachers’ Mathematical Dispositions And Self-Efficacy For Teaching Mathematics, Jasmine M. Cruz, Aaron T. Wilson, Xiaohui Wang

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

Mathematical dispositions (MD) and self-efficacy for teaching mathematics (SEFTM) are important elements of teachers‟ beliefs that significantly influence their behaviors and educational practices in the classroom. This study looked at relationships between pre-service teachers‟ (PSTs) MD and their SEFTM in connection with other descriptors related to their progress through the teacher education program and prior mathematical experiences. Survey data were collected from 238 PSTs at a midsized university in the US. Results include the finding that PSTs‟ intended grade-level and subject approximately mirror their MD and SEFTM: those planning to be elementary school (generalist) teachers were slightly behind both middle …

On A Class Of Parameter Dependent Series Generalizing Euler’S Constant, Paul Bracken

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

Series which depend on a parameter and generalize the constant discovered by Euler are introduced and studied. Convergence results are established. An infinite series expansion is obtained from these generalized formulas which can be used to evaluate the generalized constant. Euler’s constant can be obtained as a special case. Some asymptotic results are formulated and limits of some closely related sequences are given.

Attitudes Toward Using And Teaching Confidence Intervals: A Latent Profile Analysis On Elementary Statistics Instructors, Hyung Won Kim, Woo Jin Kim, Aaron T. Wilson, Ho Kyoung Ko

School of Mathematical and Statistical Sciences Faculty Publications and Presentations

The use of confidence intervals (CIs) for making a statistical inference is gaining popularity in research communities. To evaluate college statistics instructors’ readiness to teach CIs, this study explores their attitudes toward teaching CIs in elementary statistics courses, and toward using CIs in inferential statistics. Data were collected with a survey that classifies instructors’ attitudes on the basis of three previously established pedagogical components: affective, cognitive, and behavioral. Based on the survey responses from 270 participants, we created three profiles (subgroups) via latent profile analysis, and identified each profile’s pattern of attitudes toward CIs and common characteristics of the instructors …

Technologies For Lignocellulose Pretreatment To Produce Fuel Ethanol, J. M. Nie, R. J. Zhang, X. Y. Liu, F. Yang, J. J. Wang, J. Xiao, Jikai Zhao, C. F. Lv

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Bioethanol is one of the alternatives to fossil fuels. Bioethanol production from lignocellulose has advantages on source richness, but it has poor performance on the conversion yield. In order to destroy the structure of lignocellulose and promote the cellulose and other components release, lignocellulose treatment was necessarily prior to bioethanol fermentation. In this paper, eight methods for lignocellulose pretreatment were reviewed, including physical method, dilute acid pretreatment method, dilute alkali pretreatment method, steam pretreatment method, ammonia pretreatment methods, organic solvent pretreatment method, ionic liquid pretreatment method and biological pretreatment, and those principles and novel progresses were briefly introduced.

Search For Subsolar-Mass Ultracompact Binaries In Advanced Ligo's First Observing Run, B. P. Abbott, R. Abbott, T. D. Abbott, F. Acernese, K. Ackley, C. Adams, T. Adams, P. Addesso, R. X. Adhikari, V. B. Adya, C. Affeldt, B. Agarwal, M. Agathos, K. Agatsuma, N. Aggarwal, O. D. Aguiar, L. Aiello, A. Ain, P. Ajith, B. Allen, G. Allen, A. Allocca, M. A. Aloy, P. A. Altin, A. Amato, A. Ananyeva, S. B. Anderson, W. G. Anderson, S. V. Angelova, S. Antier

Physics and Astronomy Faculty Publications and Presentations

We present the first Advanced LIGO and Advanced Virgo search for ultracompact binary systems with component masses between 0.2 M-1.0 M using data taken between September 12, 2015 and January 19, 2016. We find no viable gravitational wave candidates. Our null result constrains the coalescence rate of monochromatic (delta function) distributions of nonspinning (0.2 M, 0.2 M) ultracompact binaries to be less than 1.0×106 Gpc-3 yr-1 and the coalescence rate of a similar distribution of (1.0 M, 1.0 M) ultracompact binaries to be less than 1.9×104 Gpc-3 yr-1 (at 90% confidence). Neither black holes nor neutron stars are expected to …

Identities For Partitions Of N With Parts From A Finite Set, Acadia Larsen

Theses and Dissertations

We show for a prime power number of parts m that the first differences of partitions into at most m parts can be expressed as a non-negative linear combination of partitions into at most m – 1 parts. To show this relationship, we combine a quasipolynomial construction of p(n,m) with a new partition identity for a finite number of parts. We prove these results by providing combinatorial interpretations of the quasipolynomial of p(n,m) and the new partition identity. We extend these results by establishing conditions for when partitions of n with parts coming from …

Blow-Up Solutions Of Wave Map Equations With Periodic In Time Speed Of Propagation, Nathalie M. Luna-Rivera

Theses and Dissertations

We study the initial value problem for the wave map equation with time-dependent speed of propagation. In particular, for arbitrary, small, and smooth initial data we construct blow-up solutions of the wave map with coefficients that are periodic in time. For the proof we use Lyapunov-Floquet theory and Borg’s theorem.