Improving The Performance Of Ice Sheet Modeling Through Embedded Simulation, Christopher G. Dufour

Electronic Theses and Dissertations

Understanding the impact of global climate change is a critical concern for society at large. One important piece of the climate puzzle is how large-scale ice sheets, such as those covering Greenland and Antarctica, respond to a warming climate. Given such ice sheets are under constant change, developing models that can accurately capture their dynamics represents a significant challenge to researchers. The problem, however, is properly capturing the dynamics of an ice sheet model requires a high model resolution and simulating these models is intractable even for state-of-the-art supercomputers.

This thesis presents a revolutionary approach to accurately capture ice sheet …

Social Ecological Food Systems: Sustainability Lessons From Maine Dairy Networks, Julia B. Mcguire

Electronic Theses and Dissertations

Milk production has played an integral role in the culture, landscape, and economy of Maine’s agriculture. Maine dairy farmers have faced numerous sustainability challenges to economic, environmental, and social aspects of their industry. Like many other complex social ecological systems, the Maine dairy industry faces a gap between scientific knowledge and actionable management or policy. A cultural dichotomy exists between conventional and organic farming. Shifting the focus from this binary, metrics such as social capital may play a key role in solving sustainability issues. Difficulties arise in the governance of complex social ecological systems when the scales of assessment, management, …

Shortnose Sturgeon (Acipenser Brevirostrum) Spawning Potential In The Penobscot River, Maine: Considering Dam Removals And Emerging Threats, Catherine Johnston

Electronic Theses and Dissertations

Dam removals from the Penobscot River in Maine restored access to freshwater habitat critical for the life cycle of endangered shortnose sturgeon. Prior to the dam removals, shortnose sturgeon spawning activity had not been documented. Instead, evidence suggested that individuals emigrated from the Penobscot River to spawn in the Kennebec complex, 140 km away. A central question of this thesis was whether spawning activity would commence in the first two years following dam removal. Consistent with pre-dam removal movement patterns determined using acoustic telemetry, the majority (78%) of tagged individuals emigrated from the Penobscot River at some point over the …

Sediment Accumulations Patterns In The Damariscotta River Estuary, Emily A. Chandler

Electronic Theses and Dissertations

The tidally dominated Damariscotta River estuary is located on the south-central Maine coast. The elongate, north-south orientation of the estuary is characteristic of the indented shoreline in this region and a consequence of the bedrock structural framework, comprised of Paleozoic high-grade metasedimentary rocks. Pegmatite sills form bedrock constriction points that divide the estuary into seven distinct basins. The narrow, bending geometry and sill and basin morphology impact the distribution of sediment within the estuary and the hydrodynamics of the system. This study employs multibeam bathymetry surveys, sediment grab samples and radionuclide analysis (²¹⁰Pb and ¹³⁷Cs) of sediment …

Size As A Trait For Understanding The Role Of Zooplankton In The Biological Carbon Pump, Karen Stamieszkin

Electronic Theses and Dissertations

Living organisms impact carbon transport between the atmosphere and the ocean through the biological carbon pump. Some plankton communities augment carbon export from the ocean’s surface, and are thought to have a major role in global climate. These export communities are often characterized by larger organisms that sink to depths where the carbon they contain is sequestered from the atmosphere. Zooplankton can enhance export by aggregating prey into larger sinking fecal pellets; however fecal pellet flux is a highly variable component of the biological carbon pump. Relating plankton trophic dynamics to changes in particulate carbon flux is an important step …

Extraction, Purification And Characterization Of An Antibiotic-Like Compound Produced By Rhodococcus Sp. Mtm3w5.2, Pushpavathi Reddyvari Manikindi

Electronic Theses and Dissertations

The bacterium Rhodococcus is a potential source for novel antimicrobial metabolites. Recently, the Rhodococcus strain MTM3W5.2 was isolated from a soil sample collected from Morristown, East Tennessee and was found to produce an inhibitor molecule that is active against similar Rhodococcus species. The aim of this research is to extract, purify, and characterize the active compound. The compound was obtained from both agar and broth cultures of strain MTM3W5.2 and purified by primary fractionation of crude extract on a Sephadex LH-20 column, followed by semi-preparative reversed phase column chromatography. Final purification was achieved using multiple rounds of an analytical C …

Silver-Polymer Nanocomposites, Anita N. Paul

Electronic Theses and Dissertations

The objective of this research was the development of an efficient method for the preparation of silver-polymer nanocomposites containing finely dispersed silver nanoparticles. The surface of nanosilver was functionalized by thiolation with 2-aminoethanethiol. Amino-modified nanosilver was covalently bonded to polyacrylic acid, biodegradable polymers like acid terminated polylactic acid, ester terminated poly(DL-lactide-co-glycolide) and acid terminated poly(DL lactide-co-glycolide) in the presence of diisopropylcarbodiimide by carbodiimide method. Esterification of the carboxyl groups of Ag-polyacrylic acid by hydrochloric acid in methanol resulted in the formation of a stable colloidal dispersion of Ag nanoparticles in the polymer matrix. It was observed that not just acid …

Molecular Docking, Synthesis And Evaluation Of Pyrrolo[2,1-C][1,4]Benzodiazepines Derivatives As Non-Β-Lactam Β-Lactamases Inhibitors, Joseph Osamudiamen Osazee

Electronic Theses and Dissertations

Our research aim was to design, synthesize, and study the competitive enzyme inhibition kinetics of pyrrolo[2,1-c][1,4]benzodiazepine (PBD) derivatives as potential non-²-lactam ²-lactamase inhibitors. All compounds (1-13) passed the Lipinski’s rule of 5 test and were docked into the active site of TEM-1 ²-lactamase. PBD derivatives 1-7 were synthesized in high yields and tested for their potency against TEM-1 and P99 ²-lactamases. Kinetic data showed that compounds 1, 4, 5, and 7 possessed inhibitory activity against TEM-1 ranging from 4-34 %. Docking results revealed significant interactive spanning of the active site of TEM-1 by PBDs. …

Synthesis, Characterization And Biological Evaluation Of Pyrrolo[2,1-C][1,4]Benzodiazepines For Cytotoxicity And Serine Β-Lactamases Inhibition, Joel K. Annor-Gyamfi

Electronic Theses and Dissertations

Pyrrolo[2,1-c][1,4]benzodiazepine (PBD) derivatives possess cancerostatic and anti-infective properties thus making them candidates of possible antibacterial agents. ²-lactam antibiotics are vital weapons for the treatment of bacterial infections, but their existence and effectiveness has been faced with resistance from ²-lactamases. Therefore, the need for new effective antimicrobial drugs is very crucial. In this work, we synthesized in high yields, PBD analogs 1−3, 5 and 7−9 in three to four synthetic steps from commercially available L-proline and isatoic anhydride. MTT Assay was employed to test the in vitro cytotoxicity of PBD analogs 1, 2, 5 …

Tornado Density And Return Periods In The Southeastern United States: Communicating Risk And Vulnerability At The Regional And State Levels, Michelle Bradburn

Electronic Theses and Dissertations

Tornado intensity and impacts vary drastically across space, thus spatial and statistical analyses were used to identify patterns of tornado severity in the Southeastern United States and to assess the vulnerability and estimated recurrence of tornadic activity. Records from the Storm Prediction Center's tornado database (1950-2014) were used to estimate kernel density to identify areas of high and low tornado frequency at both the regional- and state-scales. Return periods (2-year, 5-year, 10-year, 25-year, 50-year, and 100-year) were calculated at both scales as well using a composite score that included EF-scale magnitude, injury counts, and fatality counts. Results showed that the …

Newsvendor Models With Monte Carlo Sampling, Ijeoma W. Ekwegh

Electronic Theses and Dissertations

Newsvendor Models with Monte Carlo Sampling by Ijeoma Winifred Ekwegh The newsvendor model is used in solving inventory problems in which demand is random. In this thesis, we will focus on a method of using Monte Carlo sampling to estimate the order quantity that will either maximizes revenue or minimizes cost given that demand is uncertain. Given data, the Monte Carlo approach will be used in sampling data over scenarios and also estimating the probability density function. A bootstrapping process yields an empirical distribution for the order quantity that will maximize the expected profit. Finally, this method will be used …

A Study Of The Radiative Pion Capture Process As A Background To The Search For Muon To Electron Conversion With The Mu2e Experiment., Jacob Colston

Electronic Theses and Dissertations

This thesis will introduce radiative pion capture (RPC), a process which can produce a fake signal in a search for the coherent conversion of a muon to an electron in the presence of a nucleus. There will be a brief introduction to standard model (SM) physics, as well as some more in-depth discussion of the relevant high energy physics at the Mu2e experiment. We will discuss charged lepton flavor violation (CLFV), as well as Supersymmetry, which predicts CLFV at higher intensities than the SM prediction. A description of the RPC process follows, including the external and internal conversions in pion …

Exploring The Threats Of Dams And Ocean Conditions: In-River Movements And Ocean Growth Of Atlantic Salmon (Salmo Salar) From Maine's Rivers, Lisa K. Izzo

Electronic Theses and Dissertations

Substantial declines of anadromous Atlantic Salmon Salmo salar have occurred throughout the range of the species, with many populations at the southern extent of the distribution being extirpated or endangered. While Maine is the last state in the country where adult Atlantic Salmon return to rivers each year to spawn, numbers have decreased dramatically in recent decades, with typically less than 2,000 spawners returning to all Maine's rivers combined. The complex life history of this species, which involves a juvenile freshwater phase followed by a marine phase that can last one to five years before returning to freshwater to spawn …

Multilevel Models For Longitudinal Data, Aastha Khatiwada

Electronic Theses and Dissertations

Longitudinal data arise when individuals are measured several times during an ob- servation period and thus the data for each individual are not independent. There are several ways of analyzing longitudinal data when different treatments are com- pared. Multilevel models are used to analyze data that are clustered in some way. In this work, multilevel models are used to analyze longitudinal data from a case study. Results from other more commonly used methods are compared to multilevel models. Also, comparison in output between two software, SAS and R, is done. Finally a method consisting of fitting individual models for each …

Synthesis And Characterization Of Imidazolo 3,1- Tetrakis (N-Phenylacetamidato) Dirhodium (Ii) And A Crystallographic Study Of A Copper And Two Molybdenum Model Cofactors, Gabriel I.G. Thompson

Electronic Theses and Dissertations

Imidazole was reacted with 3,1-tetrakis (N-phenlyacetamidato) dirhodium (II) to explore the chemistry of asymmetric dirhodium catalysts. The imidazolo 3,1-tetrakis (Nphenlyacetamidato) dirhodium (II) complex was synthesized and then characterized by Nuclear Magnetic Resonance and Ultraviolet-Visible spectroscopies as well as by single crystal X-ray Diffraction. Additionally, one copper and two molybdenum model cofactors were characterized by XRD to better understand their structure/function relationships. NMR results gave evidence of the formation of the 3,1-imidazole complex, and UV-Vis indicated that even in large excess imidazole was coordinated only to one axial site. The structure of the 3,1-imidazole complex was confirmed by XRD with the …

An Algorithm For The Machine Calculation Of Minimal Paths, Robert Whitinger

Electronic Theses and Dissertations

Problems involving the minimization of functionals date back to antiquity. The mathematics of the calculus of variations has provided a framework for the analytical solution of a limited class of such problems. This paper describes a numerical approximation technique for obtaining machine solutions to minimal path problems. It is shown that this technique is applicable not only to the common case of finding geodesics on parameterized surfaces in R³, but also to the general case of finding minimal functionals on hypersurfaces in Rⁿ associated with an arbitrary metric.

Spatio-Temporal Analysis Of Point Patterns, Abdul-Nasah Soale

Electronic Theses and Dissertations

In this thesis, the basic tools of spatial statistics and time series analysis are applied to the case study of the earthquakes in a certain geographical region and time frame. Then some of the existing methods for joint analysis of time and space are described and applied. Finally, additional research questions about the spatial-temporal distribution of the earthquakes are posed and explored using statistical plots and models. The focus in the last section is in the relationship between number of events per year and maximum magnitude and its effect on how clustered the spatial distribution is and the relationship between …

Propensity Score Based Methods For Estimating The Treatment Effects Based On Observational Studies., Younathan Abdia

Electronic Theses and Dissertations

This dissertation consists of two interconnected research projects. The first project was a study of propensity scores based statistical methods for estimating the average treatment effect (ATE) and the average treatment effect among treated (ATT) when there are two treatment groups. The ATE is defined as the mean of the individual causal effects in the whole population, while ATT is defined as the treatment effect for the treated population. Propensity score based statistical methods, such as matching, regression, stratification, inverse probability weighting (IPW), and doubly robust (DR) methods were used to estimate the ATE and ATT. Simulation studies and case …

Multipurpose Tenofovir Disoproxil Fumarate Electrospun Fibers For The Prevention Of Hiv-1 And Hsv-2 Infections., Kevin Tyo

Electronic Theses and Dissertations

Sexually transmitted infections affect hundreds of millions of worldwide. Both human immunodeficiency virus (HIV-1 and -2) and herpes simplex virus-2 (HSV-2) remain incurable, urging the development of new prevention strategies. While current prophylactic technologies are dependent on strict user adherence to achieve efficacy, there is a dearth of delivery vehicles that provide discreet and convenient administration, combined with prolonged-delivery of active agents. To address these needs, we created electrospun fibers (EFs) comprised of FDA-approved polymers, poly(lactic-co-glycolic acid) (PLGA) and poly(DL-lactide-co-ε-caprolactone) (PLCL), to provide sustained-release and in vitro protection against HIV-1 and HSV-2. PLGA and PLCL EFs, incorporating the antiretroviral, tenofovir …

Materials Design And Band Gap Engineering Of Complex Nanostructures Using A Semi-Empirical Approach : Low Dimensional Boron Nanostructures, H-Bn Sheet With Graphene Domains And Holey Graphene., Cherno Baba Kah

Electronic Theses and Dissertations

This dissertation will explore the potential of a semi-empirical Hamiltonian, developed by the research group at the University of Louisville, in predicting the existence of new families of low-dimensional boron nanostructures based on icosahedral α-B₁₂ clusters, and in tuning the band gaps of h-BN sheets with graphene domains and holey graphene. This semi-empirical Hamiltonian models electron-electron and electron-ion interactions using environment-dependent (ED) functions, and ion-ion interactions via usual pairwise terms. Additional features of our approach are that it uses a linear combination of atomic orbitals (LCAO) framework to describe the Hamiltonian and it calculates the charge distribution around a …

Mathematical Hybrid Models For Image Segmentation., Carlos M. Paniagua Mejia

Electronic Theses and Dissertations

Two hybrid image segmentation models that are able to process a wide variety of images are proposed. The models take advantage of global (region) and local (edge) data of the image to be segmented. The first one is a region-based PDE model that incorporates a combination of global and local statistics. The influence of each statistic is controlled using weights obtained via an asymptotically stable exponential function. Through incorporation of edge information, the second model extends the capabilities of a strictly region-based variational formulation, making it able to process more general images. Several examples are provided showing the improvements of …

Processes Leading To The Formation Of Deep Granitic Shear Zones In The Grenville Front Tectonic Zone, Ontario, Canada, Deborah J. Shulman

Electronic Theses and Dissertations

The rheology of the deep crust influences the transmission of mantle stresses to the surface as well as the topographic relief of orogenic terrains. Since deformation in the deep crust is often localized in shear zones, we investigate the mechanical processes associated with strain localization to understand the rheology of the deep crust. Strain localizes due to a strength heterogeneity, which can be created by the activation of one or more weakening factors. Studying the mechanical processes and weakening factors that sustain strain localization in the deep crust is becoming increasingly important as geodynamic models become more computationally robust, and …

Cone In Cone Concretions Of The Stanley Group In Southeastern Oklahoma, Kyle B. Ayres

Electronic Theses and Dissertations

Cone in cone concretions found in the Stanley Group of Southeastern Oklahoma have a variety of external and internal attributes which allow diagenetic and theoretical models of formation to be hypothesized. Stanley Group carbonate cone in cone concretions are initially formed in sulfur reducing horizons at shallow burial depths in a poorly circulated possibly deep trough containing siliceous sediments and organic matter. Collected concretions near the town of Smithville, Oklahoma displayed four different external morphologies and four variations of mineral constituents. All concretions contained microscopic cones which initiated diffusion and/or fluid patterns and is an early cementation process that directly …

Assessment Of A Hatchery Based Rainbow Smelt Supplementation Effort, Andrew O'Malley

Electronic Theses and Dissertations

Rainbow Smelt (Osmerus mordax) are an important fish distributed throughout northeastern North America with both anadromous and landlocked populations. Abundance, size at age, and maximum size vary widely among populations and life histories. In order to compare anadromous and landlocked populations, we collected spawning adults in 2014 from four anadromous and three landlocked populations. Scales and otoliths from the anadromous fish were examined and compared for estimates of bias and precision in ageing. Analysis of both scales and otoliths provided age estimates that were acceptable, but estimates from scales were more precise and had less bias. Otoliths were …

Characterization Of Lower Permian Carbonate Subaqueous Gravity Flows In Crockett County, Texas, Wesley L. Turner

Electronic Theses and Dissertations

Transitional sediments on carbonate ramp slopes act as a link to relatively well-studied platform and basin depositional environments. In the southern Midland Basin, the key to understanding the relationship between these environments lies in the allochthonous gravity flow sediments found on the slope. Here, a succession of various gravity flow deposits is used to interpret how base level fluctuations affect the type of deposits found on the slope and their effect on the deep basinal environment. This study utilizes core samples from the Wolfcamp Formation adjacent to the Central Basin Platform in five wells in Northwest Crockett County, Texas. The …

Modeling And Measurement Of Evaporation From Frequently Tilled Sandy Soils, Nicholas R. Lawson

Electronic Theses and Dissertations

Moisture observation and control is the single largest factor that controls the mechanical properties of sand based surfaces used for thoroughbred horse racing. Currently the moisture content is estimated based on the experience and expertise of the superintendent and water is added as needed based on experience. While extensive modelling has been done on moisture loss from a range of soils with crop covers in agronomy, currently no method exists to estimate the evaporation from a surface that is tilled many times a day and remains in a partially compacted state. This thesis develops an evaporation model based on real …

An Investigation Of Hydrogeologic, Stratigraphic, And Structural Controls On Acer Grandidentatum Communities In A Karst Landscape, Owl Mountain Province, Fort Hood Military Installation, Texas, Melinda S. Faulkner

Electronic Theses and Dissertations

The Owl Mountain Province is located within the Fort Hood Military Installation, an approximately 880 km2 installation established in the 1940s in Bell and Coryell counties, Texas, which has undergone extensive land use changes associated with military training, maintaining much of the vegetation in early succession. This study investigates thelithologic, stratigraphic, and structural controls on the hydrologic, hydrogeologic, and geomorphologic evolution of the Owl Mountain Province as expressed by mesic vegetation communities, including Pleistocene relicts Acer grandidentatum, within karst terrains. These systems exhibit complexly overprinted speleogenetic evolutions within a dynamic groundwater regime resulting from regional climate shifts throughout the …

Speleogenesis Of Critchfield Bat Caves And Associated Hydrogeology Of The Northern Edwards Aquifer, Williamson County, Texas, Ashley N. Landers

Electronic Theses and Dissertations

Karst development in the Edwards Aquifer has been significantly studied in the San Antonio and Barton Spring Segments; however, karst development remains poorly studied in the Northern Segment. Detailed characterization of the Northern Segment is vital for future water conservation because of increasing urban sprawl along the Interstate 35 corridor. The Northern Segment of the Edwards Aquifer consists of Lower Cretaceous strata of the Comanche Peak, Edwards, and Georgetown formations. The stratigraphy is dominated by Edwards Limestone as it is the only formation that crops out in the study area.

Karst, stratigraphic, GIS, and geochemical studies were conducted to evaluate …

The Stratigraphic Position Of Fossil Vertebrates From The Pojoaque Member Of The Tesuque Formation (Middle Miocene, Late Barstovian) Near Española, New Mexico, Garrett R. Williamson

Electronic Theses and Dissertations

The stratigraphy of the Pojoaque Member of the Tesuque Formation near Española, NM is not well understood. This region, during the Middle Miocene, represented a dynamic alluvial fan-fluvial-lacustrine environment within the Española Basin while the Rio Grande Rift was active. Cavazza (1986) identified two paleodrainage systems (lithosome A, basin-margin facies and B, basin-floor facies) by means of sandstone and conglomerate petrology, paleocurrent, and sedimentary facies analyses. After x-ray diffraction analyses of claystones within lithosome B, mordenite was discovered, which is a zeolite mineral commonly found within volcanic rocks. This is significant because the presence of mordenite confirms Cavazza’s (1986) conclusion …

Initial Wetland Hydrology And Vegetation Composition In Predicted Wetlands Adjacent To Lake Naconiche, Nacogdoches County, Texas, Amy L. Urbanovsky

Electronic Theses and Dissertations

Plans for the construction of Lake Naconiche, located in northern Nacogdoches County, included a monitoring project to demonstrate at least 176 acres of land adjacent to the lake would be converted into wetlands. The purpose of the study was to evaluate the creation of wetlands around the lake and establish a benchmark of vegetation composition and condition for future comparison. Eight locations, placed where the majority of wetlands were expected to form, were chosen for monitoring from the shoreline at 348 feet above mean sea level (ft MSL) to the county fee take line at 357 ft MSL.

Shallow groundwater …