Physical Sciences and Mathematics Commons^™

Modelling Supercomputer Maintenance Interrupts: Maintenance Policy Recommendations, Jagadish Cherukuri

Masters Theses

A supercomputer is a repairable system with large number of compute nodes interconnected to work in harmony to achieve superior computational performance. Reliability of such a complex system depends on an effective maintenance strategy that involves both emergency and preventive maintenance. This thesis analyzes the maintenance records of four supercomputers operational at The National Institute of Computational Science located at Oak Ridge National Laboratory. We propose to use the generalized proportional intensities model (GPIM) to model the maintenance interrupts as it can capture both the reliability parameters and maintenance parameters and allows the inclusion of both emergency and preventive maintenance. …

Real-Time Spectroscopic Analysis Of Microalgal Adaptation To Changing Environmental Conditions, Robert Ked Byrd

Masters Theses

Increases in anthropogenic pollution are causing many environmental problems; understanding their impact on the environment has become an important issue. Industrialization and the burning of fossil fuels have caused increased levels of carbon dioxide to enter the atmosphere, which is contributing to global warming and ocean acidification. Agricultural runoff has caused levels of inorganic nitrogen and phosphorus to rise, where they have been noted to cause harmful algal blooms. Marine ecosystems have been particularly affected as both of these forms of pollution accumulate in bodies of water. Microalgae are important organisms in these ecosystems because they sequester these pollutants and …

Recent Seismicity And Regional Extension Aithin Southwestern Montana, Usa, Jessica Szkody

Masters Theses

Southwestern Montana has experienced several large damaging earthquakes over the last 100 years, but many minor ones that unveil the nature of the intraplate seismicity. The region in this study is part of two distinct Late Cretaceous tectonic provinces, the Rocky Mountain Foreland Basement (RMFB) and the Cordilleran Fold and Thrust Belt (CFTB). Relationships between the two provinces and their faults show that the focal mechanisms are different. Deep focal mechanisms (between 8 and 10 km) within the RMFB can be placed on a specific fault, with many smaller events falling within the hanging wall. The hypocenters within the hanging …

Geological Controls On Stratigraphy And Sedimentation Of The Mississippian Marshall Formation, Michigan Basin, U.S.A., Joseph G. Adducci

Masters Theses

An understanding of regional orogenic, climatic, and eustatic processes is critical to the interbasinal correlation of Paleozoic strata in eastern North America. Tectonic activity associated with the culmination of Appalachian Orogenic events has been shown to have regional influence on paleostructure and sediment dispersal in the Appalachian foreland basin and adjacent intracratonic Illinois and Michigan basins. The culmination of the Acadian Orogeny at the end of the Devonian represents the beginning of a period of general tectonic quiescence extending throughout the early and middle Mississippian in eastern North America. Early Mississippian strata in the Michigan basin is distinctive and marks …

An Examination Of Fertilizer Use Efficiency And Irrigation Management In Tennessee Agricultural Production, Timothy James Grant

Masters Theses

Understanding the effect of supplemental irrigation and timing of nitrogen availability on yield of cotton is pertinent to the success of Tennessee cotton producers. Response to irrigation and nitrogen source is likely to vary across greatly differing soil types. This research indicated the need for higher amounts of water and earlier irrigation initiation to optimize yields in coarse-textured, low water holding capacity soils. Deep silt loam soils did not respond to irrigation in two wet years. Delaying nitrogen availability via use of a polymer coated urea fertilizer generally either lowered or did not affect yield. Delaying nitrogen availability was less …

Measurement Of Hysteretic Shale Capillary Pressure – Saturation Relationships Using A Water Activity Meter, Brendan Michael Donnelly

Masters Theses

Capillary pressure is the pressure difference across the interface of two immiscible fluids within a porous medium due to the interfacial tension between fluids and is related to both the properties of the fluids and the porous medium. Capillary pressure within a porous medium will change depending upon its degree of saturation. Understanding the relationship between capillary pressure and saturation for a rock allows for the modeling of multi-phase flow. Many traditional methods of measuring capillary pressure are unsuitable for the characterization of shale due to their inability to measure the high capillary pressures found within the small pores. Furthermore, …

Biodegradable Nano-Hybrid Polymer Composite Networks For Regulating Cellular Behavior, Charles Henley Sprague

Masters Theses

Photo-crosslinkable polymeric biomaterials have emerged in the field of biomedical research to promote tissue regeneration. For example, scaffolds that can be crosslinked and hardened in situ have been known to make suitable implant alternatives. Since injectable and photo-crosslinkable biomaterials offer the advantage of being minimally invasive, they have emerged to compete with autografts, a current highly invasive method to repair diseased tissue. A series of novel photo-crosslinkable, injectable, and biodegradable nano-hybrid polymers consisting of poly(ε-caprolactone fumarate) (PCLF) and polyhedral oligomeric silsesquioxane (POSS) has been synthesized in our laboratory via polycondensation. To engineer the material properties of the nano-hybrid networks, varied …

Near-Infrared (2 – 4 Micron) Spectroscopy Of Near-Earth Asteroids: A Search For Oh/H2o On Small Planetary Bodies, Nathanael Richard Wigton

Masters Theses

Near-Earth asteroids (NEAs) are not expected to have H₂O [water] ice on their surfaces because a) most accreted dry and therefore never contained H₂O, and b) their relatively high surface temperatures should drive rapid H₂O ice sublimation. However, OH/H₂O has been detected on other anhydrous inner solar system objects, including the Moon and Vesta. Possible sources for OH/H₂O in the inner Solar System might include production via solar wind interactions, carbonaceous chondrite or cometary impact delivery, or native OH/H₂O molecules bound to phyllosilicates. As these processes are active …

Mechanisms For Social Influence, Jeremy David Auerbach

Masters Theses

Throughout the thesis, I study mathematical models that can help explain the dependency of social phenomena in animals and humans on individual traits. The first chapter investigates consensus building in human groups through communication of individual preferences for a course of action. Individuals share and modify these preferences through speaker listener interactions. Personality traits, reputations, and social networks structures effect these modifications and eventually the group will reach a consensus. If there is variation in personality traits, the time to reach consensus is delayed. Reputation models are introduced and explored, finding that those who can best estimate the average initial …

Utilizing Inventory Data And Public Opinion To Develop An Urban Tree Management Plan For Oak Ridge, Tn, Thomas E. Jennings

Masters Theses

Proper management by a trained urban forester is essential for the health of urban trees, due to the adverse growing conditions they face. Unfortunately, many cities do not have the luxury of employing an urban forester for various reasons, which is the case for the City of Oak Ridge, TN. This study utilized inventory data of the street trees, park trees, and trees surrounding the municipal complexes in Oak Ridge, as well as evaluated park visitor satisfaction in three of the city parks through the use of a survey to aid in the development of an urban tree management plan. …

American Black Duck Wintering Dynamics And Dabbling Duck Response To Herbicide Application In Western Tennessee Wetlands, Joshua Matthew Osborn

Masters Theses

American black duck (Anas rubripes) populations declined throughout North America in the late 20^th century. Although the breeding population has since stabilized, research investigating habitat use by black ducks in the Mississippi Flyway is scarce. Impacts of wetland management practices in response to invasive species must also be tested to measure responses to habitat quality by black ducks and other waterfowl. During winters 2011-2013 (December-February), I estimated food biomass, diurnal habitat use, and activities of black ducks in 6 cover types at the Duck River Unit of Tennessee National Wildlife Refuge and Cross Creeks National Wildlife Refuge …

Correlating Morphology To Performance In Conjugated Polymer Nanocomposite Thin Films, Siddharth Pradhan

Masters Theses

The morphology and performance of thin films that consist of conjugated polymers and nanoparticles are investigated in this thesis. In the first system, the morphology of the nanocomposite that consists of low band gap alternating copolymers with a methano-fullerene are determined by neutron scattering and correlated to their photovoltaic performance as polymer solar cells. These results show that the conjugated alternating copolymers have high miscibility relative to other conjugated polymers. The analysis of the scattering data shows that the morphology of the conjugated polymer-fullerene bulk heterojunction can be described as the formation of aggregates on two length scales. Important parameters …

Survival And Growth Rate Of Translocated Freshwater Mussels Lampsilis Fasciola And Medionidus Conradicus, Laura L. Pullum

Masters Theses

Freshwater mussels (Family Unionidae and Margaritiferidae) are a widely threatened group of bivalve molluscs, particularly in the Southeastern United States. Translocation of freshwater mussels is an increasingly common conservation method. However, there are relatively few studies that quantitatively investigate the factors influencing translocation success or failure. In October 2013, hundreds of Medionidus conradicus and Lampsilis fasciola were translocated to the Pigeon and Nolichucky Rivers in Tennessee, with an interim partial survey (June 2014) and a full survey (October 2014). In this study, I analyze this field-collected data to determine the mechanism(s) that currently influence the outcomes of Tennessee mussel translocation. …

Anomalous Thermal Indicators From Authigenic Minerals In Upper Paleozoic Strata Of The Michigan Basin, Kyle Cox

Masters Theses

Indications of anomalous paleo-temperatures exist in strata of the Michigan basin, USA. The thermal history of the basin was investigated through identification and analysis of authigenic components in two Upper Paleozoic strata, the Devonian Dundee Formation and Mississippian Marshall Sandstone. Formation conditions for diagenetic phases in both units were estimated through a variety of means and compared to conditions expected for a simple burial model. Authigenic clays identified in the Marshall via X-ray diffraction are expected to have formed at temperatures above what would have been produced by burial alone. Stable isotope and fluid inclusion analysis indicate the same for …

Lithologic Properties Of The Upper Ordovician Utica Formation, Michigan Basin, Usa: A Geological Characterization And Assessment Of Carbon Dioxide Confinement Potential, Frank Richard Sattler

Masters Theses

The Utica/Maquoketa Shale is considered to be the primary confining layer for Cambro-Ordovician CO₂ sequestration targets in the Midwest in the Michigan and Illinois basins, respectively. Prospective regional geologic seals in mudrock formations possess a combination of lithologic properties including nanometer scale pore space, elevated breakthrough pressures for non-wetting fluid phases and ductile mechanical deformation. Mineralogical composition is related to and typically controls these properties.

The objective of this study is to investigate the geological controls on stratigraphic and lithologic variability in the Utica/Collingwood in the Michigan basin. Twelve conventional cores and hundreds of modern well logs from the …

Wind Oscillator For Power Genration, Rs Vewen Ramasamy

Masters Theses

This thesis describes in detail the design, mechanical, electrical and software considerations in developing a working model for the non-conventional wind power converter called Wind Oscillator. This was based on the concept developed and patented by Tianshu Liu in the paper “Wind Oscillator and Rotor for Power Generation”[1]. In order to verify the practicality of this idea, a working model of the Wind Oscillator was designed, built and tested in the Western Michigan University wind tunnel facility. LabVIEW data acquisition and photogrammetry was performed on the model so as to evaluate the power generated by the Wind Oscillator and to …

Thermal History Of The Michigan Basin: Results From Thermal Maturation Data And Geodynamic Modelling, Kirk A. Wagenvelt

Masters Theses

Thermal cooling, crustal convection, high temperature fluid advection, and 1.0 Km of eroded overburden are required to explain thermal maturation observations in the Michigan Basin. Observed tectonic subsidence in central Michigan follows an exponential decay indicative of thermal cooling following an anomalous heating event. Crustal convection is responsible for episodes of rapid subsidence coincident with the late Paleozoic Appalachian orogeny. Fluid advection through dilated faults reactivated by the Alleghanian orogeny brought hot fluids (as much as 255⁰ C) to the surface and impacted thermal maturation of organic matter in sediments. Models require 1.0 Km of eroded overburden to model thermal …

Injective Modules And Divisible Groups, Ryan Neil Campbell

Masters Theses

An R-module M is injective provided that for every R-monomorphism g from R-modules A to B, any R-homomorphism f from A to M can be extended to an R-homomorphism h from B to M such that hg = [equals] f. That is one of several equivalent statements of injective modules that we will be discussing, including concepts dealing with ideals of rings, homomorphism modules, short exact sequences, and splitting sequences. A divisible group G is defined when for every element x of G and every nonzero integer n, there exists y in …

The Cms Pixel Luminosity Telescope Browser Interface, Mark Miller Foerster

Masters Theses

The search for and detailed study of new particles and forces with the Compact Muon Solenoid (CMS) detector at the Large Hadron Collider (LHC) of CERN is fundamentally dependent on the precise measurement of the rate at which proton-proton collisions produce any particles, the so-called luminosity. For the discovery of the Higgs candidate in 2012 the relative precision of this quantity was about 2.5%. To be able to observe deviations from Standard Model predictions for decay rates of this particle and others which can hint to new phenomena the targeted luminosity uncertainty is about 1%. Therefore, a new device, the …

A Model Of Activity And Intervention Across Social Networks, Allison Marie Heming

Masters Theses

Social network analysis is a growing field used to measure connectivity and activity of people and communities. We develop a model that creates a network and measures the overall activity of that network. We then apply interventions to this model and measure the change in overall activity. Through an optimization process we are able to determine the best course of action that minimizes or maximizes the overall activity of the network.

Accuracy Of Supervised Classification Of Cropland In Sub–Saharan Africa, Sarah Lynn Lewis-Gonzales

Masters Theses

Mali is a country in sub–Saharan Africa where monitoring of cropped land area would greatly benefit food security initiatives and aid organizations. More importantly village–scale studies on cropped land are fundamental to making a difference in the way we look at cropped land area and food availability in this region of the world. Using Landsat surface reflectance imagery and World View–2 derived labeled data, this study focuses on accuracy of supervised classification methods while addressing various levels of scale. Several classification methods are taken into account to determine the best method possible to produce cropped area estimates using this data. …

Numerical Methods For Solving Optimal Control Problems, Garrett Robert Rose

Masters Theses

There are many different numerical processes for approximating an optimal control problem. Three of those are explained here: The Forward Backward Sweep, the Shooter Method, and an Optimization Method using the MATLAB Optimization Tool Box. The methods will be explained, and then applied to three different test problems to see how they perform. The results show that the Forward Backward Sweep is the best of the three methods with the Shooter Method being a competitor.

Symmetry Detection In Integer Linear Programs, Jonathan David Schrock

Masters Theses

Symmetry has long been recognized as a major obstacle in integer programming. Unless properly recognized and exploited, the branch-and-bound tree generated when solving highly symmetric integer programs (IPs) can contain many identical subproblems, resulting in a waste of computational effort. Effective methods have been developed to exploit known symmetry. This thesis focuses on improving methods that compute the symmetry group of an IP. In the literature, computing the symmetry group of an IP is performed by generating a graph with a similar structure as the IP, and then computing the automorphism group of the graph. Unfortunately, these graphs may be …

Flexible Memory Allocation In Kinetic Monte Carlo Simulations, Aaron David Craig

Masters Theses

We introduce two new algorithms for Kinetic Monte Carlo simulations: the minimal and flexible allocation algorithms. The theory and computational challenges associated with K.M.C. simulations are briefly discussed. We outline the simple cubic, solid-on-solid model of epitaxial growth and analyze four methods for its simulation: the linear search, standard inverted list, minimal allocation, and flexible allocation algorithms. We then implement these algorithms, analyze their performances, and discuss implications of the results.

Phase Dynamics Of Locset Control Methodology, Brendan Neschke

Masters Theses

Single-mode fiber amplifiers produce diffraction-limited beams very efficiently. Maximum beam intensity requires that an array of these amplifiers have their beams coherently combined at the target. Optical path differences and noise adversely affect beam quality. An existing closed loop phase control methodology, called the locking of optical coherence by single-detector electronic-frequency tagging (LOCSET), corrects phase errors in real time by electronically detecting path length differences and sending signals to lithium niobate phase adjusters. Broadening the line-width using “jitter” of the input signal can increase the output power of an individual amplifier by suppressing nonlinearity. The system dynamics of LOCSET are …

Naturally-Occurring Metals Concentrations In Michigan Soils: A 2015 Survey, Zachary Lowell Spotts

Masters Theses

Closure of hazardous waste sites can be aided through the use of a soil background survey for metals. Data for these studies come from either field sampling or publicly available environmental files. Previous studies were conducted in Michigan, known as the Michigan Background Soil Survey (MBSS). The current update is a refinement and improvement of the 2005 update. New data was collected from publicly available environmental files and other sources. Both the current update and the 2005 update differentiated data by soil type and glacial lobe. GIS analysis was used to observe spatial distribution of the data and to determine …

Determining Discharge From The Fallasburg Dam And The Hydrology Of The Flat River Bypass Channel, Lowell, Michigan, Seth Kuiper

Masters Theses

The Fallasburg Dam on the Flat River is required to release 110 cfs to the Bypass Channel. Residents have often reported low flows in the river, especially during the summer. The hydrology of the Bypass Channel downstream from the dam was investigated to determine whether the required flow was being released. Discharge measured at multiple transects reveal a shifts from gaining to losing conditions during the year. Gaining conditions occur during the spring and after significant rain events; losing conditions occur in the summer during dry periods. Five discharge measurements in 2013 and three in 2014 reveal flows less than …

Monte Carlo Simulations On Xeon Phi: Offload And Native Mode, Bryar Shareef

Masters Theses

In high performance computing, Monte Carlo methods are widely used to solve problems in various areas of computational physics, finance, mathematics, electrical engineering and many other fields. We have designed Monte Carlo methods to compute Feynman loop integrals in high energy physics, and to solve problems in stochastic geometry with applications to computer graphics, such as the tetrahedron picking problem leading to 12 dimensional integrals.

The Intel Xeon Phi is a coprocessor based on a Many Integrated Core (MIC) architecture to gain extreme performance. We have used two different modes, "offload" and "native", to implement the simulations. In offload mode, …

Mass Table Calculations With Nuclear Density Functional Theory, Noah Watson Birge

Masters Theses

To better understand nuclei and the strong nuclear force, it is useful to analyze global nuclear properties and trends across the nuclear chart. To this end, we utilized Nuclear Density Functional Theory with Skyrme Energy Density Functionals in conjunction with high-performance computing to perform large-scale mass table calculations for even-even nuclei. Using the binding energy, pairing gap, root-mean-square radius, and deformation data from these tables we were able to analyze the two-proton and two-neutron drip lines, neutron skin depth, two-proton radioactivity, and the effect of nuclear deformation on mass filters. We used numerous energy density functionals to assess the statistical …

Visualization Techniques For Neuroscience-Inspired Dynamic Architectures, Margaret Grace Drouhard

Masters Theses

This work introduces visualization tools for Neuroscience-Inspired Dynamic Architecture (NIDA) networks and for the Dynamic Adaptive Neural Network Array (DANNA) hardware implementation of NIDA. A NIDA network is a novel type of artificial neural network that has performed well on control, anomaly detection, and classification tasks. We introduce a three dimensional visualization of software NIDA networks that represents network structure and simulates activity on networks. We present some of the analysis tasks for which the tool has been used, including the identification of useful substructures within NIDA networks through activity analysis and through the tracing of causality paths from events …