Physical Sciences and Mathematics Commons^™

Monitoring And Mitigation Of Elevated Co2 Impacts Using Microalgae, Terry-Rene Wiesner Brown

USF Tampa Graduate Theses and Dissertations

Climate change is arguably the greatest environmental and economic challenge of our time. There are considerable documented and projected impacts to both human and natural systems as a result of climate change. These impacts include changes in temperature, sea level, precipitation patterns, and biogeography of ecologically and economically relevant species, including pathogens. One of the main drivers of climate change is elevated levels of atmospheric carbon dioxide (CO₂), a greenhouse gas. Since pre-industrial times, atmospheric CO₂ levels have increased from approximately 280 ppm to over 400 ppm, as a result of fossil fuel combustion, cement production and …

Photic Stress In Symbiont-Bearing Reef Organisms: Analyses Of Photosynthetic Performance, Natasha Mendez-Ferrer

USF Tampa Graduate Theses and Dissertations

Photo-oxidative stress is one of the key factors that can induce bleaching in reef organisms. With the decline of coral reefs and recurrent bleaching events, many studies have focused on understanding the mechanism behind this phenomenon. Two of the hypotheses that explain how the photosynthetic performance of the symbiont is affected and influences bleaching are: (1) disruption of the photosynthetic pathway by direct damage to the photosystem II (PSII), and (2) by inhibition of the Calvin-Benson cycle. In this dissertation I examine different aspects of photosynthetic performance in symbiont-bearing reef organisms and how this is influenced by symbiont loss and …

A Smartphone-Based System For Clinical Gait Assessment, Andres Alfredo Perez Leon

USF Tampa Graduate Theses and Dissertations

Patients with lower limbs problems are an increasing population in the US and many of them require surgery and its subsequent post-op Physical Therapy (PT). For all these patients, tracking their progress and evolution towards full recovery is very important. To assess the patients and track their progress, patients are usually required to perform very specific tests administered by a physical therapist. These tests either require very expensive equipment or rather require the subjective experience of the physical therapist who administer them. One of these tests is the Functional Gait Assessment (FGA) test, perhaps the most widely adopted one for …

Authentication In Wireless Body Area Networks (Wban), Nagalaxmi Yenuganti

USF Tampa Graduate Theses and Dissertations

With the advancements in technology and computing environment capabilities, the number of devices that people carry has increased exponentially. This increase initially occurred as a result of necessity to monitor the human body condition due to chronic diseases, heart problems etc. Later, individuals’ interest was drawn towards self-monitoring their physiology and health care. This is achieved by implanting various sensors that can proactively monitor the human body based on medical necessity and the health condition of the user. Sensors connected on a human body perceive phenomena such as locomotion or heartbeat, and act accordingly to form a Body Area Network. …

Polymer Characteristics Of Polyelectrolyte Polypeptides, Jorge Monreal

USF Tampa Graduate Theses and Dissertations

Polypeptides are polymerized chains of amino acids linked covalently through peptide bonds. Polyelectrolyte polypeptides are polypeptides with electrolyte repeating groups. Several amino acids contain ionizable side chains which result in charge distributions when dissolved in aqueous solutions. This dissertation is motivated by a desire to gain knowledge of polyelectrolyte polypeptides as recent advances in chemical synthesis of polypeptides have made possible the fabrication of designed polypeptides that do not naturally occur in nature. Potential applications of newly designed polypeptides span the range from medical to clothing and energy even to robotics.

In this dissertation we compare the characteristic behavior of …

Applications Of Molecular Modelling And Structure Based Drug Design In Drug Discovery, Sreya Mukherjee

USF Tampa Graduate Theses and Dissertations

Calcium ions have important roles in cellular processes including intracellular signaling, protein folding, enzyme activation and initiation of programmed cell death. Cells maintain low levels of calcium in their cytosol in order to regulate these processes. When activation of calcium-dependent processes is needed, cells can release calcium stored in the endoplasmic reticulum (ER) into the cytosol to initiate the processes. This can also initiate formation of plasma membrane channels that allow entry of additional calcium from the extracellular milieu. The change in calcium levels is referred to as calcium flux. A key protein involved in initiation of calcium flux is …

The Effect Of Home Range Estimation Techniques On Habitat Use Analysis, Brendon Quinton

USF Tampa Graduate Theses and Dissertations

The term “home range” refers to the area in which an animal spends most of its time during everyday activities. This study examined the effects of four different home range estimation techniques on the proportions of habitats located therein. The study utilized a point dataset collected for twenty individual Florida Black Bears (Ursus americanus floridanus), occurring in five different areas throughout the state of Florida. Each dataset was used to create home ranges using the following techniques: (1) Minimum Convex Polygon, (2) Kernel Density Estimation, (3) Characteristic Hull Polygon, and (4) Time-Geographic Density Estimation, a new home range …

Enforcing Security Policies On Gpu Computing Through The Use Of Aspect-Oriented Programming Techniques, Bader Albassam

USF Tampa Graduate Theses and Dissertations

This thesis presents a new security policy enforcer designed for securing parallel computation on CUDA GPUs. We show how the very features that make a GPGPU desirable have already been utilized in existing exploits, fortifying the need for security protections on a GPGPU. An aspect weaver was designed for CUDA with the goal of utilizing aspect-oriented programming for security policy enforcement. Empirical testing verified the ability of our aspect weaver to enforce various policies. Furthermore, a performance analysis was performed to demonstrate that using this policy enforcer provides no significant performance impact over manual insertion of policy code. Finally, future …

Fast Computation On Processing Data Warehousing Queries On Gpu Devices, Sam Cyrus

USF Tampa Graduate Theses and Dissertations

Current database management systems use Graphic Processing Units (GPUs) as dedicated accelerators to process each individual query, which results in underutilization of GPU. When a single query data warehousing workload was run on an open source GPU query engine, the utilization of main GPU resources was found to be less than 25%. The low utilization then leads to low system throughput. To resolve this problem, this paper suggests a way to transfer all of the desired data into the global memory of GPU and keep it until all queries are executed as one batch. The PCIe transfer time from CPU …

Oversampling Methods For Imbalanced Dataset Classification And Their Application To Gynecological Disorder Diagnosis, Iman Nekooeimehr

USF Tampa Graduate Theses and Dissertations

In many applications, the dataset for classification may be highly imbalanced where most of the instances in the training set may belong to some of the classes (majority classes), while only a few instances are from the other classes (minority classes). Conventional classifiers will strongly favor the majority class and ignore the minority instances. The imbalance problem can occur in both binary data classification and also in ordinal regression. Ordinal regression is a supervised approach for learning the ordinal relationship between classes. Extensive research has been performed for addressing imbalanced datasets for binary classification; however, current methods do not address …

Digital Integration, Jacob C. Boccio

USF Tampa Graduate Theses and Dissertations

Artificial intelligence is an emerging technology; something far beyond smartphones, cloud integration, or surgical microchip implantation. Utilizing the work of Ray Kurzweil, Nick Bostrom, and Steven Shaviro, this thesis investigates technology and artificial intelligence through the lens of the cinema. It does this by mapping contemporary concepts and the imagined worlds in film as an intersection of reality and fiction that examines issues of individual identity and alienation. I look at a non-linear timeline of films involving machine advancement, machine intelligence, and stages of post-human development; Elysium (2013) and Surrogates (2009) are about technology as an extension of the self, …

Decision Support Systems For Water Management: Investigating Stakeholder Perceptions Of System Use, Gabriella Balsam

USF Tampa Graduate Theses and Dissertations

Water resources are becoming increasingly important to protect, but doing so has proven challenging due to the complex nature of resource management. Many researchers have been trying to develop “usable science” to aid in this endeavor, and one method of this is the development of decision support systems. This has led to the employment of this method as a potential tool for decision makers, scientists, and the interested public to use; yet little literature is available on the success of their implementation. This study attempted to fill the gaps by gathering data through surveys and interviews from stakeholders who are …

Electrospinning Of Polymeric Solutions Using Opuntia Ficus-Indica Mucilage And Iron Oxide For Nanofiber Membranes For Treating Arsenic Contaminated Water, Venkatesh Eppili

USF Tampa Graduate Theses and Dissertations

Water is the essential part of every organism and it is also a vital constituent of healthy living and diet. Unfortunately water contamination over the past decade has increased dramatically leading to various diseases. As technology advances, we are detecting many pollutants at smaller levels of concentrations. Arsenic (As) is one of those major pollutants, and Arsenic poisoning is a condition caused due to excess levels of arsenic in the body. The main basis for Arsenic poisoning is from ground water which naturally contains high concentrations of arsenic. A case study from 2007 states that over 137 million people in …

Impact Of Visualization On Engineers – A Survey, Dhaval Kashyap Shah

USF Tampa Graduate Theses and Dissertations

In the recent years, there has been a tremendous growth in data. Numerous research and technologies have been proposed and developed in the field of Visualization to cope with the associated data analytics. Despite these new technologies, the pace of people’s capacity to perform data analysis has not kept pace with the requirement. Past literature has hinted as to various reasons behind this disparity. The purpose of this research is to demonstrate specifically the usage of Visualization in the field of engineering. We conducted the research with the help of a survey identifying the places where Visualization educational shortcomings may …

Environmental And Community Health In South San Diego County: A Behavior Analysis Of Recreational Ocean Users Along Imperial Beach, California, Trista Brophy

USF Tampa Graduate Theses and Dissertations

Garbage & sewage runoff into the Pacific Ocean at the shoreline along the U.S./Mexico Border region poses serious health and environmental threats. The purpose of this study was to analyze the current beach users’ behavioral factors that may be linked to illness prevalence from Coronado Island to the U.S./Mexico border at Imperial Beach in San Diego County. It is a continuation of a study completed by Wildcoast and Imperial Beach Clinic in 2011. The study tried to answer the following two major questions: How have the number of illnesses reported by users along South San Diego County beaches changed in …

Impact Of Sludge Layer Geometry On The Hydraulic Performance Of A Waste Stabilization Pond, Faissal Romaric Ouedraogo

USF Tampa Graduate Theses and Dissertations

Improving the hydraulic performance of waste stabilization ponds (WSPs) is an important management strategy to not only ensure protection of public health and the environment, but also to maximize the potential reuse of valuable resources found in the treated effluent. To reuse effluent from WSPs, a better understanding of the factors that impact the hydraulic performance of the system is needed. One major factor determining the hydraulic performance of a WSP is sludge accumulation, which alters the volume of the pond.

In this study, computational fluid dynamics (CFD) analysis was applied to investigate the impact of sludge layer geometry on …

On Spectral Properties Of Single Layer Potentials, Seyed Zoalroshd

USF Tampa Graduate Theses and Dissertations

We show that the singular numbers of single layer potentials on smooth curves asymptotically behave like O(1/n). For the curves with singularities, as long as they contain a smooth sub-arc, the resulting single layer potentials are never trace-class. We provide upper bounds for the operator and the Hilbert-Schmidt norms of single layer potentials on smooth and chord-arc curves. Regarding the injectivity of single layer potentials on planar curves, we prove that among single layer potentials on dilations of a given curve, only one yields a non-injective single layer potential. A criterion for injectivity of single layer potentials on …

Preparation And Characterization Of Van Der Waals Heterostructures, Horacio Coy Diaz

USF Tampa Graduate Theses and Dissertations

In this dissertation different van der Waals heterostructures such as graphene-MoS₂ and MoTe₂-MoS₂ were prepared and characterized. In the first heterostructure, polycrystalline graphene was synthesized by chemical vapor deposition and transferred on top of MoS₂ single crystal. In the second heterostructure, MoTe₂ monolayers were deposited on MoS₂ by molecular beam epitaxy.

Characterization of graphene-MoS₂ heterostructures was conducted by spin and angle resolve spectroscopy which showed that the electronic structure of the bulk MoS₂ and graphene in this van der Waals heterostructures is modified. For MoS₂ underneath the graphene, a band …

Secure Communication Scheme In Smart Home Environment, Hari Krishna Jonnalagadda

USF Tampa Graduate Theses and Dissertations

Internet of Things, has started to mark its existence from past few years. Right from its inception with a coke machine at Carnegie Mellon University, it has come a long way, connecting billions of devices to internet. This journey is well supported by the advancements in networking, hardware miniaturization and sensing capabilities. Diverse nature of applications of Internet of Things, has cut the communication barriers between the varieties of fields ranging from manufacturing industry to health-care industry. Smart Home is one such application of Internet of Things. Connectivity of home appliances, to achieve automation in living, defines Smart Home. Out …

Microcavity Enhanced Raman Scattering, Benjamin James Petrak

USF Tampa Graduate Theses and Dissertations

Raman scattering can accurately identify molecules by their intrinsic vibrational frequencies, but its notoriously weak scattering efficiency for gases presents a major obstacle to its practical application in gas sensing and analysis. This work explores the use of high finesse (50 000) Fabry-Pérot microcavities as a means to enhance Raman scattering from gases. A recently demonstrated laser ablation method, which carves out a micromirror template on fused silica--either on a fiber tip or bulk substrates-- was implemented, characterized, and optimized to fabricate concave micromirror templates ~10 µm diameter and radius of curvature. The fabricated templates were coated with a high-reflectivity …

Video Data Collection For Continuous Identity Assurance, Janani Venkatesan

USF Tampa Graduate Theses and Dissertations

Frequently monitoring the identity of a person connected to a secure system is an important component in a cyber-security system. Identity Assurance (IA) mechanisms which continuously confirm and verify users’ identity after the initial authentication process ensure integrity and security. Such systems prevent unauthorized access and eliminate the need of an authorized user to present credentials repeatedly for verification. Very few cyber-security systems deploy such IA modules. These IA modules are typically based on computer vision and machine learning algorithms. These algorithms work effectively when trained with representative datasets. This thesis describes our effort at collecting a small dataset of …

Blind And Visually Impaired Users Adaptation To Web Environments: A Qualitative Study, Raneem Saqr

USF Tampa Graduate Theses and Dissertations

Although much research exists on human behavior in online environments, research on users with disabilities is still rare. To draw more attention to this population, this dissertation explored browsing patterns and adaptive behaviors of people with visual disability across different online environments common in daily activities: social network, e-commerce, online information, and search engines’ websites. The main objective of this study is to propose a conceptual framework of how blind and visually impaired users browse and adapt to different web environments. We achieve this objective using a qualitative approach through three studies. In the first study, the researchers collect data …

Spatially Directional Resorcin[4]Arene Cavitand Glycoconjugates For Organic Catalysis In Aqueous Media, Ali Husain Husain

USF Tampa Graduate Theses and Dissertations

Resorcin[4]arenes and their rigid structures “cavitands” offer a unique molecular structure scaffolds suitable for attaching and orienting multi-ligands on their upper rims. Their remarkable structure properties, the relative ease of chemical modification on their either rims or through the multiple phenolic hydroxyl (-OH) groups, manipulating their cavity size and the role of spatial directionality provided by their cores, led synthetic chemist to explore their utilities in the synthesis of valuable resorcin[4]arene/cavitand assemblies with wide range of applications in many research areas such as supramolecular chemistry, host-guest chemistry, glycoconjugates, polymer chemistry, host-guest chemistry, micro-reactors in chemical catalysis and others. In particular, …

Some Results Concerning Permutation Polynomials Over Finite Fields, Stephen Lappano

USF Tampa Graduate Theses and Dissertations

Let p be a prime, p a power of p and 𝔽_q the finite field with q elements. Any function φ: 𝔽_q → 𝔽_q can be unqiuely represented by a polynomial, 𝔽_φ of degree < q. If the map x ↦ F_φ(x) induces a permutation on the underlying field we say F_φ is a permutation polynomial. Permutation polynomials have applications in many diverse fields of mathematics. In this dissertation we are generally concerned with the following question: Given a polynomial f, when does the map x ↦ F( …

Inquiry Of Lipid Membranes Interacting With Functional Peptides And Polyphenol Drug Molecules, Chian Sing Ho

USF Tampa Graduate Theses and Dissertations

Cellular membranes are important targets for many membrane-active peptides and drug compounds. Here we are interested in deciphering how lipid membranes are perturbed by several membrane-active molecules, including the transmembrane domain of the influenza M2 protein (M2TM), aggregates formed by a synthetic polyglutamine peptide, and three polyphenol compounds (i.e., tamoxifen, genistein, and verapamil). We employ phase-separated ternary lipid model membranes in the form of giant unilamellar vesicles (GUVs) to simulate raft-like structures that have been proposed to govern many important processes in plasma membranes (e.g., intracellular singling and trafficking). Specifically, we use fluorescent microscopy to interrogate how those membrane additives …

Msspark: Implementation Of Molecular Simulation Queries Using Apache Spark, Parneet Kaur

USF Tampa Graduate Theses and Dissertations

Huge amount of data is being generated in almost every field and it cannot be avoided, rather is essential for the advancement of the field. Analysis of this data requires intensive computing power. Molecular Simulation is a powerful tool for understanding the behavior of natural systems. The simulation generates large amount data while observing the spatial and temporal relationships. The challenge is to handle the analytical queries that are often compute intensive.

Although various tools exist to tackle this problem, but in this paper we have tried an alternate approach that uses Apache Spark- a modern big data platform – …

Sustainability At U.S. Urban Water Utilities: A Framework To Assess Key Attributes, Matthew Paul Ries

USF Tampa Graduate Theses and Dissertations

Urban water utilities in the United States face challenges due to a combination of external drivers. These include urbanization and population growth, which are stressing a system of aging infrastructure. Compliance with increasing regulations is also a challenge in a fiscally-constrained economic environment. A changing climate threatens infrastructure and past assumptions for water supply and quality. Urban utilities provide clean water and sanitation services to over 80% of the country’s population and its industrial centers. Therefore, the sustainability of these water utilities are crucial to the country’s and the public’s well-being.

New operating models are emerging for a “utility of …

Optimizing Methods For Extraction Of Organic Compounds From Molluscan Shells, Kaydee Jo West

USF Tampa Graduate Theses and Dissertations

Mollusk shells contain proteins within and between the crystals of calcium carbonate. These organic molecules play an important role in biomineralization and shell function, and their stable isotope ratios of carbon and nitrogen are also thought to record important ecological information about the animal's diet and nutrient sources. These proteins can be preserved for millions of years, offering potential insight into pre-anthropogenic ecological conditions. However, shell organics in older shells are typically recovered in reduced abundances due to leaching and remaining organics are often converted from insoluble proteins to soluble, free amino acids, making them difficult to detect and recover. …

The Effects Of Age And Gender On Pedestrian Traffic Injuries: A Random Parameters And Latent Class Analysis, Tatok Raharjo Raharjo

USF Tampa Graduate Theses and Dissertations

Pedestrians are vulnerable road users because they do not have any protection while they walk. They are unlike cyclists and motorcyclists who often have at least helmet protection and sometimes additional body protection (in the case of motorcyclists with body-armored jackets and pants). In the US, pedestrian fatalities are increasing and becoming an ever larger proportion of overall roadway fatalities (NHTSA, 2016), thus underscoring the need to study factors that influence pedestrian-injury severity and potentially develop appropriate countermeasures. One of the critical elements in the study of pedestrian-injury severities is to understand how injuries vary across age and gender ‒ …

Hamiltonian Formulations And Symmetry Constraints Of Soliton Hierarchies Of (1+1)-Dimensional Nonlinear Evolution Equations, Solomon Manukure

USF Tampa Graduate Theses and Dissertations

We derive two hierarchies of 1+1 dimensional soliton-type integrable systems from two spectral problems associated with the Lie algebra of the special orthogonal Lie group SO(3,R). By using the trace identity, we formulate Hamiltonian structures for the resulting equations. Further, we show that each of these equations can be written in Hamiltonian form in two distinct ways, leading to the integrability of the equations in the sense of Liouville. We also present finite-dimensional Hamiltonian systems by means of symmetry constraints and discuss their integrability based on the existence of sufficiently many integrals of motion.