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2005

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Articles 1681 - 1710 of 5573

Full-Text Articles in Physical Sciences and Mathematics

Synthesis Of Distributed Processes From Scenario-Based Specifications, Jun Sun, Jin Song Dong Jul 2005

Synthesis Of Distributed Processes From Scenario-Based Specifications, Jun Sun, Jin Song Dong

Research Collection School Of Computing and Information Systems

Given a set of sequence diagrams, the problem of synthesis is of deciding whether there exists a satisfying object system and if so, synthesize one automatically. It is crucial in the development of complex systems, since sequence diagrams serve as the manifestation of use cases and if synthesizable they could lead directly to implementation. It is even more interesting (and harder) if the synthesized object system is distributed. In this paper, we propose a systematic way of synthesizing distributed processes from Live Sequence Charts. The basic idea is to first construct a CSP specification from the LSC specification, and then …


Interannual Variation Of Stratification In Lower Chesapeake Bay, Christopher S. Katzenmiller Jul 2005

Interannual Variation Of Stratification In Lower Chesapeake Bay, Christopher S. Katzenmiller

OES Theses and Dissertations

Stratification in the water column can prove to be an important indicator to the state of the water column and ecosystem. The focus of this research is to evaluate trends in stratification in the Lower Chesapeake Bay. Detailed analysis was performed on a 14 year data set to study interannual variation in the region of study. Potential energy anomaly was used to quantify stratification. Potential energy anomaly is the amount of energy required to mix a water column. It is determined from the vertical density structure of density. Potential energy anomaly is the departure of potential energy from climate conditions. …


Criteria Analysis And Validation Of The Reliability Of Web Services-Oriented Systems,, Jia Zhang, Liang-Jie Zhang Jun 2005

Criteria Analysis And Validation Of The Reliability Of Web Services-Oriented Systems,, Jia Zhang, Liang-Jie Zhang

Jia Zhang

No abstract provided.


Bridging Units And Business Incubation In A Technology Research Lab, Arcot Desai Narasimhalu Jun 2005

Bridging Units And Business Incubation In A Technology Research Lab, Arcot Desai Narasimhalu

Arcot Desai NARASIMHALU

This paper describes a new model of incubation practices at Singapore’s Kent Ridge Digital Labs from 1998 till 2002. The model deviates from previously known models where by research institutions including institutions of higher learning license their technologies to companies or entrepreneurs who wished to either productize the technology or start a new company using the technology. The model was successfully applied towards the creation of more than fifteen start ups. These start ups attracted significant investments from venture capitalists from Singapore and elsewhere. Several of these companies are still in business.


Cooperative Conservation: Increasing Capacity Through Community Partnerships -- Interagency Volunteer Program & Cooperative Conservation Program: Quarterly Progress Report, Period Ending June 30, 2005, Margaret N. Rees Jun 2005

Cooperative Conservation: Increasing Capacity Through Community Partnerships -- Interagency Volunteer Program & Cooperative Conservation Program: Quarterly Progress Report, Period Ending June 30, 2005, Margaret N. Rees

Get Outdoors Nevada

  • 1,289+ records are now loaded into volunteer database.
  • 150 volunteers registered for events on the interagency website.
  • Three interagency events were successfully completed: April 2 – Red Rock Day at Red Rock Canyon Conservation Area; April 15 – Stewardship Saturday at Moapa Valley National Wildlife Refuge; June 4 – National Trails Day at Spring Mountains National Recreation Area.
  • 25 interagency volunteer events are identified for year-two.
  • Volunteer recognition program is underway.
  • Volunteer training program syllabus is under development.
  • Potential funding sources are identified (grants).


Waldo Lake Research In 2004, Mark D. Sytsma, John Rueter, Richard Petersen, Roy Koch, Scott A. Wells, Michelle Wood, Yangdong Pan, Robert Leslie Annear, Aaron Hook, Laura Johnson, Rich Miller, Amanda Murphy, Terry Stoltz Jun 2005

Waldo Lake Research In 2004, Mark D. Sytsma, John Rueter, Richard Petersen, Roy Koch, Scott A. Wells, Michelle Wood, Yangdong Pan, Robert Leslie Annear, Aaron Hook, Laura Johnson, Rich Miller, Amanda Murphy, Terry Stoltz

Center for Lakes and Reservoirs Publications and Presentations

The Willamette National Forest has worked with Portland State University, Center for Lakes and Reservoirs (PSU) and the University of Oregon (UO) to investigate ecosystem changes, provide guidance on long-term monitoring methods, assess monitoring data, develop predictive water quality models, and conduct research that will lead to better protection and understanding of the Waldo Lake ecosystem. This report summarizes the second year of collaborative PSU-UO research at Waldo Lake. Research has focused on understanding physical, chemical and biological characteristics of Waldo Lake across a range of spatial and temporal scales. Research tasks that continued from 2003 into 2004 included temperature …


Maximal Surfaces In Complexes, Allen J. Dickson Jun 2005

Maximal Surfaces In Complexes, Allen J. Dickson

Theses and Dissertations

Cubical complexes are defined in a manner analogous to that for simplicial complexes, the chief difference being that cubical complexes are unions of cubes rather than of simplices. A very natural cubical complex to consider is the complex C(k_1,...,k_n) where k_1,...,k_n are nonnegative integers. This complex has as its underlying space [0,k_1]x...x[0,k_n] subset of R^n with vertices at all points having integer coordinates and higher dimensional cubes formed by the vertices in the natural way. The genus of a cubical complex is defined to be the maximum genus of all surfaces that are subcomplexes of the cubical complex. A formula …


Interagency Science And Research: Quarterly Progress Report, Period Ending June 30, 2005, Margaret N. Rees Jun 2005

Interagency Science And Research: Quarterly Progress Report, Period Ending June 30, 2005, Margaret N. Rees

Interagency Science and Research Strategy

  • Search for project manager commenced in late March 2005, with initial review of applications occurring in April 2005
  • Reference checks of qualified candidates commenced in May 2005
  • Interviews with two candidates were conducted in early June 2005
  • The preferred candidate declined the position
  • An additional interview is now scheduled for 7/06/05


Take Pride In America In Southern Nevada: Quarterly Progress Report, Period Ending June 30, 2005, Margaret N. Rees Jun 2005

Take Pride In America In Southern Nevada: Quarterly Progress Report, Period Ending June 30, 2005, Margaret N. Rees

Anti-littering Programs

  • Search for project manager commenced in January 2005, with initial review of applications occurring in February 2005
  • Comprehensive review of qualified candidates conducted March 2005
  • Interviews with four candidates were conducted in early April 2005
  • Douglas Joslin, Jr., approved by federal managers in May 2005 and hired as program manager, effective July 11, 2005
  • Regional Take Pride in America public service announcements taped May 24, 2005
  • Meeting held June 29, 2005, to discuss national and regional roll-out of new Take Pride PSAs


Development Of Dose Conversion Coefficients For Radionuclides Produced In Spallation Neutron Sources Quarterly Progress Report 4/01/05 – 6/30/05, Phillip W. Patton, Mark Rudin Jun 2005

Development Of Dose Conversion Coefficients For Radionuclides Produced In Spallation Neutron Sources Quarterly Progress Report 4/01/05 – 6/30/05, Phillip W. Patton, Mark Rudin

Transmutation Sciences Physics (TRP)

The research consortium comprised of representatives from several universities and national laboratories has successfully generated internal and external dose conversion coefficients for twenty radionuclides produced in spallation neutron sources. These dose coefficients fill data gaps exist in Federal Guide Report No. 11 and in Publications 68 and 72 of the International Commission on Radiological Protection (ICRP), and two articles containing the data have been accepted for publication in the Journal of Health Physics. Currently, more nuclear data is needed for the rare radionuclides produced from a mercury target. While attempting to develop a workable plan to acquire this missing data, …


Semiclassical Methods In Curved Spacetime And Black Hole Thermodynamics, Horacio E. Camblong Jun 2005

Semiclassical Methods In Curved Spacetime And Black Hole Thermodynamics, Horacio E. Camblong

Physics and Astronomy

Improved semiclassical techniques are developed and applied to a treatment of a real scalar field in a D-dimensional gravitational background. This analysis, leading to a derivation of the thermodynamics of black holes, is based on the simultaneous use of (i) a near-horizon description of the scalar field in terms of conformal quantum mechanics; (ii) a novel generalized WKB framework; and (iii) curved-spacetime phase-space methods. In addition, this improved semiclassical approach is shown to be asymptotically exact in the presence of hierarchical expansions of a near-horizon type. Most importantly, this analysis further supports the claim that the thermodynamics of black holes …


Event-Wise ⟨PT⟩ Fluctuations In Au-Au Collisions At √SNn = 130 Gev, J. Adams, C. Adler, M.M. Aggarwal, Z. Ahammed, J. Amonett, B.D. Anderson, M. Anderson, D. Arkhipkin, G.S. Averichev, S.K. Badyal, J. Balewski, O. Barannikova, L.S. Barnby, J. Baudot, S. Bekele, V.V. Belaga, R. Bellwied, J. Berger, B.I. Bezverkhny, S. Bhardwaj, P. Bhaskar, A.K. Bhati, H. Bichsel, A. Billmeier, L.C. Bland, C.O. Blyth, B.E. Bonner, M. Botje, A. Boucham, A.V. Brandin, A. Bravar, R.V. Cadman, X.Z. Cai, H. Caines, M. Calderón De La Barca Sánchez, J. Carroll, J. Castillo, M. Castro, D. Cebra, P. Chaloupka, S. Chattopadhyay, H.F. Chen, Y. Chen, S.P. Chernenko, M. Cherney, A. Chikanian, B. Choi, W. Christie, J.P. Coffin, T.M. Cormier, J.G. Cramer, H.J. Crawford, D. Das, S. Das, A.A. Derevschikov, L. Didenko, T. Dietel, X. Dong, J.E. Draper, F. Du, A.K. Dubey, V.B. Dunin, J.C. Dunlop, M.R. Dutta Mazumdar, V. Eckardt, L.G. Efimov, V. Emelianov, J. Engelage, G. Eppley, B. Erazmus, M. Estienne, P. Fachini, V. Faine, J. Faivre, R. Fatemi, K. Filimonov, P. Filip, E. Finch, Y. Fisyak, D. Flierl, K.J. Foley, J. Fu, C.A. Gagliardi, M.S. Ganti, T.D. Gutierrez, N. Gagunashvili, J. Gans, L. Gaudichet, M. Germain, F. Geurts, V. Ghazikhanian, P. Ghosh, J.E. Gonzalez, O. Grachov, V. Grigoriev, S. Gronstal, D. Grosnick, M. Guedon, S.M. Guertin, A. Gupta, E. Gushin, T.J. Hallman, D. Hardtke, J.W. Harris, M. Heinz, T.W. Henry, S. Hepplemann, T. Herston, B. Hippolyte, A. Hirsch, E. Hjort, G.W. Hoffmann, M. Horsley, H.Z. Huang, S.L. Huang, T.J. Humanic, G. Igo, A. Ishihara, P. Jacobs, W.W. Jacobs, M. Janik, I. Johnson, P.G. Jones, E.G. Judd, S. Kabana, M. Kaneta, M. Kaplan, D. Keane, J. Kiryluk, A. Kisiel, J. Klay, S.R. Klein, A. Klyachko, D.D. Koetke, T. Kollegger, A.S. Konstantinov, M. Kopytine, L. Kotchenda, A.D. Kovalenko, M. Kramer, P. Kravtsov, K. Krueger, C. Kuhn, A.I. Kulikov, A. Kumar, G.J. Kunde, C.L. Kunz, R. Kh. Kutuev, A.A. Kuznetsov, M.A.C. Lamont, J.M. Landgraf, S. Lange, C.P. Lansdell, B. Lasiuk, F. Laue, J. Lauret, A. Lebedev, R. Lednicky, M. Leontiev, M.J. Levine, C. Li, Q. Li, S.J. Lindenbaum, M.A. Lisa, F. Liu, L. Liu, Z. Liu, Q.J. Liu, T. Ljubicic, W.J. Llope, H. Long, R.S. Longacre, M. Lopez-Noriega, W.A. Love, T. Ludlam, D. Lynn, J.G. Ma, Y.G. Ma, D. Magestro, S. Mahajan, L.K. Mangotra, D.P. Mahapatra, R. Majka, R. Manweiler, S. Margetis, C. Markert, L. Martin, J.N. Marx, H.S. Matis, Yu.A. Matulenko, T.S. Mcshane, F. Meissner, Yu. Melnick, A. Meschanin, M. Messer, M.L. Miller, Z. Milosevich, N.G. Minaev, C. Mironov, D.K. Mishra, J. Mitchell, B. Mohanty, L. Molnar, C.F. Moore, M.J. Mora-Corral, V. Morozov, M.M. De Moura, M.G. Munhoz, B.K. Nandi, S.K. Nayak, T.K. Nayak, J.M. Nelson, P. Nevski, V.A. Nikitin, L.V. Nogach, B. Norman, S.B. Nurushev, G. Odyniec, A. Ogawa, V. Okorokov, M. Oldenburg, D. Olson, G. Paic, S.U. Pandey, S.K. Pal, Y. Panebratsev, S.Y. Panitkin, A.I. Pavlinov, T. Pawlak, V. Perevoztchikov, W. Peryt, V.A. Petrov, S.C. Phatak, R. Picha, M. Planinic, J. Pluta, N. Porile, J. Porter, A.M. Poskanzer, M. Potekhin, E. Potrebenikova, B.V.K.S. Potukuchi, D. Prindle, C. Pruneau, J. Putschke, G. Rai, G. Rakness, R. Raniwala, S. Raniwala, O. Ravel, R.L. Ray, S.V. Razin, D. Reichhold, J.G. Reid, G. Renault, F. Retiere, A. Ridiger, H.G. Ritter, J.B. Roberts, O.V. Rogachevskiy, J.L. Romero, A. Rose, C. Roy, L. Ruan, R. Sahoo, I. Sakrejda, S. Salur, J. Sandweiss, I. Savin, J. Schambach, R.P. Scharenberg, N. Schmitz, L.S. Schroeder, K. Schweda, J. Seger, D. Seliverstov, P. Seyboth, E. Shahaliev, M. Shao, M. Sharma, K.E. Shestermanov, S.S. Shimanskiy, R.N. Singaraju, F. Simon, G. Skoro, N. Smirnov, R. Snellings, G. Sood, P. Sorensen, J. Sowinski, H.M. Spinka, B. Srivastava, T.D.S. Stanislaus, R. Stock, A. Stolpovsky, M. Strikhanov, B. Stringfellow, C. Struck, A.A.P. Suaide, E. Sugarbaker, C. Suire, M. Šumbera, B. Surrow, T.J.M. Symons, A. Szanto De Toledo, P. Szarwas, A. Tai, J. Takahashi, A.H. Tang, D. Thein, J.H. Thomas, V. Tikhomirov, M. Tokarev, M.B. Tonjes, T.A. Trainor, S. Trentalange, R.E. Tribble, M.D. Trivedi, V. Trofimov, O.D. Tsai, T. Ullrich, D.G. Underwood, G. Van Buren, A.M. Vander Molen, A.N. Vasiliev, M. Vasiliev, S.E. Vigdor, Y.P. Viyogi, W.T. Waggoner, F. Wang, G. Wang, X.L. Wang, Z.M. Wang, H. Ward, J.W. Watson, R. Wells, G.D. Westfall, C. A. Whitten Jr., H. Wieman, R. Willson, S.W. Wissink, R. Witt, J. Wood, J. Wu, N. Xu, Z. Xu, Z.Z. Xu, A.E. Yakutin, E. Yamamoto, J. Yang, P. Yepes, V.I. Yurevich, Y.V. Zanevsky, I. Zborovsky, H. Zhang, H.Y. Zhang, W.M. Zhang, Z.P. Zhang, P.A. Żołnierczuk, R. Zoulkarneev, Y. Zoulkarneeva, A.N. Zubarev Jun 2005

Event-Wise ⟨PT⟩ Fluctuations In Au-Au Collisions At √SNn = 130 Gev, J. Adams, C. Adler, M.M. Aggarwal, Z. Ahammed, J. Amonett, B.D. Anderson, M. Anderson, D. Arkhipkin, G.S. Averichev, S.K. Badyal, J. Balewski, O. Barannikova, L.S. Barnby, J. Baudot, S. Bekele, V.V. Belaga, R. Bellwied, J. Berger, B.I. Bezverkhny, S. Bhardwaj, P. Bhaskar, A.K. Bhati, H. Bichsel, A. Billmeier, L.C. Bland, C.O. Blyth, B.E. Bonner, M. Botje, A. Boucham, A.V. Brandin, A. Bravar, R.V. Cadman, X.Z. Cai, H. Caines, M. Calderón De La Barca Sánchez, J. Carroll, J. Castillo, M. Castro, D. Cebra, P. Chaloupka, S. Chattopadhyay, H.F. Chen, Y. Chen, S.P. Chernenko, M. Cherney, A. Chikanian, B. Choi, W. Christie, J.P. Coffin, T.M. Cormier, J.G. Cramer, H.J. Crawford, D. Das, S. Das, A.A. Derevschikov, L. Didenko, T. Dietel, X. Dong, J.E. Draper, F. Du, A.K. Dubey, V.B. Dunin, J.C. Dunlop, M.R. Dutta Mazumdar, V. Eckardt, L.G. Efimov, V. Emelianov, J. Engelage, G. Eppley, B. Erazmus, M. Estienne, P. Fachini, V. Faine, J. Faivre, R. Fatemi, K. Filimonov, P. Filip, E. Finch, Y. Fisyak, D. Flierl, K.J. Foley, J. Fu, C.A. Gagliardi, M.S. Ganti, T.D. Gutierrez, N. Gagunashvili, J. Gans, L. Gaudichet, M. Germain, F. Geurts, V. Ghazikhanian, P. Ghosh, J.E. Gonzalez, O. Grachov, V. Grigoriev, S. Gronstal, D. Grosnick, M. Guedon, S.M. Guertin, A. Gupta, E. Gushin, T.J. Hallman, D. Hardtke, J.W. Harris, M. Heinz, T.W. Henry, S. Hepplemann, T. Herston, B. Hippolyte, A. Hirsch, E. Hjort, G.W. Hoffmann, M. Horsley, H.Z. Huang, S.L. Huang, T.J. Humanic, G. Igo, A. Ishihara, P. Jacobs, W.W. Jacobs, M. Janik, I. Johnson, P.G. Jones, E.G. Judd, S. Kabana, M. Kaneta, M. Kaplan, D. Keane, J. Kiryluk, A. Kisiel, J. Klay, S.R. Klein, A. Klyachko, D.D. Koetke, T. Kollegger, A.S. Konstantinov, M. Kopytine, L. Kotchenda, A.D. Kovalenko, M. Kramer, P. Kravtsov, K. Krueger, C. Kuhn, A.I. Kulikov, A. Kumar, G.J. Kunde, C.L. Kunz, R. Kh. Kutuev, A.A. Kuznetsov, M.A.C. Lamont, J.M. Landgraf, S. Lange, C.P. Lansdell, B. Lasiuk, F. Laue, J. Lauret, A. Lebedev, R. Lednicky, M. Leontiev, M.J. Levine, C. Li, Q. Li, S.J. Lindenbaum, M.A. Lisa, F. Liu, L. Liu, Z. Liu, Q.J. Liu, T. Ljubicic, W.J. Llope, H. Long, R.S. Longacre, M. Lopez-Noriega, W.A. Love, T. Ludlam, D. Lynn, J.G. Ma, Y.G. Ma, D. Magestro, S. Mahajan, L.K. Mangotra, D.P. Mahapatra, R. Majka, R. Manweiler, S. Margetis, C. Markert, L. Martin, J.N. Marx, H.S. Matis, Yu.A. Matulenko, T.S. Mcshane, F. Meissner, Yu. Melnick, A. Meschanin, M. Messer, M.L. Miller, Z. Milosevich, N.G. Minaev, C. Mironov, D.K. Mishra, J. Mitchell, B. Mohanty, L. Molnar, C.F. Moore, M.J. Mora-Corral, V. Morozov, M.M. De Moura, M.G. Munhoz, B.K. Nandi, S.K. Nayak, T.K. Nayak, J.M. Nelson, P. Nevski, V.A. Nikitin, L.V. Nogach, B. Norman, S.B. Nurushev, G. Odyniec, A. Ogawa, V. Okorokov, M. Oldenburg, D. Olson, G. Paic, S.U. Pandey, S.K. Pal, Y. Panebratsev, S.Y. Panitkin, A.I. Pavlinov, T. Pawlak, V. Perevoztchikov, W. Peryt, V.A. Petrov, S.C. Phatak, R. Picha, M. Planinic, J. Pluta, N. Porile, J. Porter, A.M. Poskanzer, M. Potekhin, E. Potrebenikova, B.V.K.S. Potukuchi, D. Prindle, C. Pruneau, J. Putschke, G. Rai, G. Rakness, R. Raniwala, S. Raniwala, O. Ravel, R.L. Ray, S.V. Razin, D. Reichhold, J.G. Reid, G. Renault, F. Retiere, A. Ridiger, H.G. Ritter, J.B. Roberts, O.V. Rogachevskiy, J.L. Romero, A. Rose, C. Roy, L. Ruan, R. Sahoo, I. Sakrejda, S. Salur, J. Sandweiss, I. Savin, J. Schambach, R.P. Scharenberg, N. Schmitz, L.S. Schroeder, K. Schweda, J. Seger, D. Seliverstov, P. Seyboth, E. Shahaliev, M. Shao, M. Sharma, K.E. Shestermanov, S.S. Shimanskiy, R.N. Singaraju, F. Simon, G. Skoro, N. Smirnov, R. Snellings, G. Sood, P. Sorensen, J. Sowinski, H.M. Spinka, B. Srivastava, T.D.S. Stanislaus, R. Stock, A. Stolpovsky, M. Strikhanov, B. Stringfellow, C. Struck, A.A.P. Suaide, E. Sugarbaker, C. Suire, M. Šumbera, B. Surrow, T.J.M. Symons, A. Szanto De Toledo, P. Szarwas, A. Tai, J. Takahashi, A.H. Tang, D. Thein, J.H. Thomas, V. Tikhomirov, M. Tokarev, M.B. Tonjes, T.A. Trainor, S. Trentalange, R.E. Tribble, M.D. Trivedi, V. Trofimov, O.D. Tsai, T. Ullrich, D.G. Underwood, G. Van Buren, A.M. Vander Molen, A.N. Vasiliev, M. Vasiliev, S.E. Vigdor, Y.P. Viyogi, W.T. Waggoner, F. Wang, G. Wang, X.L. Wang, Z.M. Wang, H. Ward, J.W. Watson, R. Wells, G.D. Westfall, C. A. Whitten Jr., H. Wieman, R. Willson, S.W. Wissink, R. Witt, J. Wood, J. Wu, N. Xu, Z. Xu, Z.Z. Xu, A.E. Yakutin, E. Yamamoto, J. Yang, P. Yepes, V.I. Yurevich, Y.V. Zanevsky, I. Zborovsky, H. Zhang, H.Y. Zhang, W.M. Zhang, Z.P. Zhang, P.A. Żołnierczuk, R. Zoulkarneev, Y. Zoulkarneeva, A.N. Zubarev

Physics

We present the first large-acceptance measurement of event-wise mean transverse momentum ⟨pt⟩ fluctuations for Au-Au collisions at nucleon-nucleon center-of-momentum collision energy √sNN = 130 GeV. The observed nonstatistical ⟨pt⟩ fluctuations substantially exceed in magnitude fluctuations expected from the finite number of particles produced in a typical collision. The r.m.s. fractional width excess of the event-wise ⟨pt⟩ distribution is 13.7±0.1(stat) ±1.3(syst)% relative to a statistical reference, for the 15% most-central collisions and for charged hadrons within pseudorapidity range |η|c. The width excess varies smoothly but nonmonotonically with collision centrality and does not display rapid …


An Exposition Of The Deterministic Polynomial-Time Primality Testing Algorithm Of Agrawal-Kayal-Saxena, Robert Lawrence Anderson Jun 2005

An Exposition Of The Deterministic Polynomial-Time Primality Testing Algorithm Of Agrawal-Kayal-Saxena, Robert Lawrence Anderson

Theses and Dissertations

I present a thorough examination of the unconditional deterministic polynomial-time algorithm for determining whether an input number is prime or composite proposed by Agrawal, Kayal and Saxena in their paper [1]. All proofs cited have been reworked with full details for the sake of completeness and readability.


The Cell Cycle–Regulated Genes Of Schizosaccharomyces Pombe, Anna Oliva, Adan Rosebrock, Francisco Ferrezuelo, Haiying Chen, Saumyadipta Pyne, Steve Skiena, Bruce Futcher, Janet Leatherwood Jun 2005

The Cell Cycle–Regulated Genes Of Schizosaccharomyces Pombe, Anna Oliva, Adan Rosebrock, Francisco Ferrezuelo, Haiying Chen, Saumyadipta Pyne, Steve Skiena, Bruce Futcher, Janet Leatherwood

Department of Molecular Genetics and Microbiology Faculty Publications

Many genes are regulated as an innate part of the eukaryotic cell cycle, and a complex transcriptional network helps enable the cyclic behavior of dividing cells. This transcriptional network has been studied in Saccharomyces cerevisiae (budding yeast) and elsewhere. To provide more perspective on these regulatory mechanisms, we have used microarrays to measure gene expression through the cell cycle of Schizosaccharomyces pombe (fission yeast). The 750 genes with the most significant oscillations were identified and analyzed. There were two broad waves of cell cycle transcription, one in early/mid G2 phase, and the other near the G2/M transition. The early/mid G2 …


A Note On The Construction Of Counterfactuals And The G-Computation Formula, Zhuo Yu, Mark J. Van Der Laan Jun 2005

A Note On The Construction Of Counterfactuals And The G-Computation Formula, Zhuo Yu, Mark J. Van Der Laan

U.C. Berkeley Division of Biostatistics Working Paper Series

Robins' causal inference theory assumes existence of treatment specific counterfactual variables so that the observed data augmented by the counterfactual data will satisfy a consistency and a randomization assumption. In this paper we provide an explicit function that maps the observed data into a counterfactual variable which satisfies the consistency and randomization assumptions. This offers a practically useful imputation method for counterfactuals. Gill & Robins [2001]'s construction of counterfactuals can be used as an imputation method in principle, but it is very hard to implement in practice. Robins [1987] shows that the counterfactual distribution can be identified from the observed …


Cross-Validated Bagged Learning, Mark J. Van Der Laan, Sandra E. Sinisi, Maya L. Petersen Jun 2005

Cross-Validated Bagged Learning, Mark J. Van Der Laan, Sandra E. Sinisi, Maya L. Petersen

U.C. Berkeley Division of Biostatistics Working Paper Series

Many applications aim to learn a high dimensional parameter of a data generating distribution based on a sample of independent and identically distributed observations. For example, the goal might be to estimate the conditional mean of an outcome given a list of input variables. In this prediction context, Breiman (1996a) introduced bootstrap aggregating (bagging) as a method to reduce the variance of a given estimator at little cost to bias. Bagging involves applying the estimator to multiple bootstrap samples, and averaging the result across bootstrap samples. In order to deal with the curse of dimensionality, typical practice has been to …


On Additive Regression Of Expectancy, Ying Qing Chen Jun 2005

On Additive Regression Of Expectancy, Ying Qing Chen

UW Biostatistics Working Paper Series

Regression models have been important tools to study the association between outcome variables and their covariates. The traditional linear regression models usually specify such an association by the expectations of the outcome variables as function of the covariates and some parameters. In reality, however, interests often focus on their expectancies characterized by the conditional means. In this article, a new class of additive regression models is proposed to model the expectancies. The model parameters carry practical implication, which may allow the models to be useful in applications such as treatment assessment, resource planning or short-term forecasting. Moreover, the new model …


Soft-Gluon Expansions Through Nnnlo, Nikolaos Kidonakis Jun 2005

Soft-Gluon Expansions Through Nnnlo, Nikolaos Kidonakis

Faculty Articles

I present universal master formulas for soft-gluon corrections to hard-scattering cross sections through next-to-next-to-next-to-leading order (NNNLO). I also briefly discuss applications to some processes where these corrections enhance the cross section and decrease the scale dependence.


Cosmic Shear Of The Microwave Background: The Curl Diagnostic, Asantha Cooray, Marc Kamionkowski, Robert R. Caldwell Jun 2005

Cosmic Shear Of The Microwave Background: The Curl Diagnostic, Asantha Cooray, Marc Kamionkowski, Robert R. Caldwell

Dartmouth Scholarship

Weak-lensing distortions of the cosmic-microwave-background (CMB) temperature and polarization patterns can reveal important clues to the intervening large-scale structure. The effect of lensing is to deflect the primary temperature and polarization signal to slightly different locations on the sky. Deflections due to density fluctuations, gradient-type for the gradient of the projected gravitational potential, give a direct measure of the mass distribution. Curl-type deflections can be induced by, for example, a primordial background of gravitational waves from inflation or by second-order effects related to lensing by density perturbations. Whereas gradient-type deflections are expected to dominate, we show that curl-type deflections can …


Proton Elastic Form Factor Ratios To Q2=3.5 Gev2 By Polarization Transfer, V. Punjabi, C. F. Perdrisat, K. A. Aniol, F. T. Baker, J. Berthot, P. Y. Bertin, W. Bertozzi, A. Besson, L. Bimbot, W. U. Boeglin, E. J. Brash, D. Brown, J. R. Calarco, L. S. Cardman, Z. Chai, C. C. Chang, J. P. Chen, E. Chudakov, S. Churchwell, E. Cisbani, D. S. Dale, R. De Leo, A. Deur, B. Diederich, J. J. Domingo, M. B. Epstein, L. A. Ewell, K. G. Fissum, A. Fleck, H. Fonvieille, S. Frullani, J. Gao, F. Garibaldi, A. Gasparian, G. Gerstner, S. Gilad, R. Gilman, A. Glamazdin, C. Glashausser, J. Gomez, V. Gorbenko, A. Green, J. O. Hansen, C. R. Howell, G. M. Huber, M. Iodice, C. W. De Jager, S. Jaminion, X. Jiang, M. K. Jones, W. Kahl, J. J. Kelly, M. Khayat, L. M. Kramer, G. Kumbartzki, M. Kuss, Enkeleida K. Lakuriqi, G. Laveissiere, J. J. Lerose, M. Liang, R. A. Lindgren, N. Liyanage, G. J. Lolos, R. Macri, R. Madey, S. Malov, D. J. Margaziotis, P. Markowitz, K. Mccormick, J. I. Mcintyre, R. L. J. Van Der Meer, R. Michaels, B. D. Milbrath, J. Y. Mougey, S. K. Nanda, E. A. J. M. Offermann, Z. Papandreou, L. Pentchev, G. G. Petratos, N. M. Piskunov, R. I. Pomatsalyuk, D. L. Prout, G. Quemener, R. D. Ransome, B. A. Raue, Y. Roblin, R. Roche, G. Rutledge, P. M. Rutt, A. Saha, T. Saito, A. J. Sarty, T. P. Smith, P. Sorokin, S. Strauch, R. Suleiman, K. Takahashi, J. A. Templon, L. Todor, P. E. Ulmer, G. M. Urciuoli, P. Vernin, B. Vlahovic, H. Voskanyan, K. Wijesooriya, B. B. Wojtsekhowski, R. J. Woo, F. Xiong, G. D. Zainea, Z. L. Zhou Jun 2005

Proton Elastic Form Factor Ratios To Q2=3.5 Gev2 By Polarization Transfer, V. Punjabi, C. F. Perdrisat, K. A. Aniol, F. T. Baker, J. Berthot, P. Y. Bertin, W. Bertozzi, A. Besson, L. Bimbot, W. U. Boeglin, E. J. Brash, D. Brown, J. R. Calarco, L. S. Cardman, Z. Chai, C. C. Chang, J. P. Chen, E. Chudakov, S. Churchwell, E. Cisbani, D. S. Dale, R. De Leo, A. Deur, B. Diederich, J. J. Domingo, M. B. Epstein, L. A. Ewell, K. G. Fissum, A. Fleck, H. Fonvieille, S. Frullani, J. Gao, F. Garibaldi, A. Gasparian, G. Gerstner, S. Gilad, R. Gilman, A. Glamazdin, C. Glashausser, J. Gomez, V. Gorbenko, A. Green, J. O. Hansen, C. R. Howell, G. M. Huber, M. Iodice, C. W. De Jager, S. Jaminion, X. Jiang, M. K. Jones, W. Kahl, J. J. Kelly, M. Khayat, L. M. Kramer, G. Kumbartzki, M. Kuss, Enkeleida K. Lakuriqi, G. Laveissiere, J. J. Lerose, M. Liang, R. A. Lindgren, N. Liyanage, G. J. Lolos, R. Macri, R. Madey, S. Malov, D. J. Margaziotis, P. Markowitz, K. Mccormick, J. I. Mcintyre, R. L. J. Van Der Meer, R. Michaels, B. D. Milbrath, J. Y. Mougey, S. K. Nanda, E. A. J. M. Offermann, Z. Papandreou, L. Pentchev, G. G. Petratos, N. M. Piskunov, R. I. Pomatsalyuk, D. L. Prout, G. Quemener, R. D. Ransome, B. A. Raue, Y. Roblin, R. Roche, G. Rutledge, P. M. Rutt, A. Saha, T. Saito, A. J. Sarty, T. P. Smith, P. Sorokin, S. Strauch, R. Suleiman, K. Takahashi, J. A. Templon, L. Todor, P. E. Ulmer, G. M. Urciuoli, P. Vernin, B. Vlahovic, H. Voskanyan, K. Wijesooriya, B. B. Wojtsekhowski, R. J. Woo, F. Xiong, G. D. Zainea, Z. L. Zhou

Enkeleida K. Lakuriqi

This paper was published online on 20 May 2005 without several of the authors’ corrections incorporated. Equation (13) has been replaced. The captions of Figs. 16–18 have also been replaced. Typographical errors on pages 4, 6, 14, 15, 18, 19, 22, and 24 have all been corrected. The paper has been corrected as of 8 June 2005. The text is correct in the printed version of the journal.


Spatio-Temporal Point Processes: Methods And Applications, Peter J. Diggle Jun 2005

Spatio-Temporal Point Processes: Methods And Applications, Peter J. Diggle

Johns Hopkins University, Dept. of Biostatistics Working Papers

No abstract provided.


Power Efficient Connected Topologies In Ad-Hoc Networks, G. Srivastava, Joe F. Chicharo, P. Boustead Jun 2005

Power Efficient Connected Topologies In Ad-Hoc Networks, G. Srivastava, Joe F. Chicharo, P. Boustead

Faculty of Informatics - Papers (Archive)

Power efficient topologies in an ad-hoc network can reduce battery usage and increase the lifetime of a network. Topology control algorithms including a local minimum spanning tree (LMST), distributed relative neighbourhood graph (DRNG) and K-Neigh graphs are computed by using the location or the distance information of the network nodes. Inaccurate distance or location information can lead to disconnected topology graphs. Furthermore, a distance based topology graph may not necessarily be connected due to wireless signal attenuation and propagation characteristics. In a realistic scenario, a small link distance may correspond to a large transmission power as the signal may need …


Polymers With Pendant Coumarins: Synthesis And Characterization Of Polystyrenes And Polymethacrylates With Pendant Coumarin Moieties, T. Christopher Corkery Jun 2005

Polymers With Pendant Coumarins: Synthesis And Characterization Of Polystyrenes And Polymethacrylates With Pendant Coumarin Moieties, T. Christopher Corkery

Chris Corkery

No abstract provided.


Testing First: Emphasizing Testing In Early Programming Courses, Will Marrero, Amber Settle Jun 2005

Testing First: Emphasizing Testing In Early Programming Courses, Will Marrero, Amber Settle

Amber Settle

The complexity of languages like Java and C++ can make introductory programming classes in these languages extremely challenging for many students. Part of the complexity comes from the large number of concepts and language features that students are expected to learn while having little time for adequate practice or examples. A second source of difficulty is the emphasis that object-oriented programming places on abstraction. We believe that by placing a larger emphasis on testing in programming assignments in these introductory courses, students have an opportunity for extra practice with the language, and this affords them a gentler transition into the …


South Florida Coastal Water Quality Monitoring Network - 1-3/05 Quarterly Report (C-15397), Joseph N. Boyer Jun 2005

South Florida Coastal Water Quality Monitoring Network - 1-3/05 Quarterly Report (C-15397), Joseph N. Boyer

SERC Research Reports

No abstract provided.


A Case For Exhaustive Optimization, Sanza Kazadi, Michele Lee, Lauren Lee Jun 2005

A Case For Exhaustive Optimization, Sanza Kazadi, Michele Lee, Lauren Lee

Sanza Kazadi

Evolutionary algorithms have enjoyed a great success in a variety of different fields ranging from numerical optimization to general creative design. However, to date, the question of why this success is possible has never been adequately determined. In this paper, we examine two algorithms: a genetic algorithm and a pseudo-exhaustive search algorithm dubbed Directed Exhaustive Search. We examine the GA's apparent ability to compound individual mutations and its role in the GA's optimization. We then explore the use of the DES algorithm using a suitably altered mutation operator mimicking the GA's surreptitious compounding of the mutation operator. We find that …


Nanoscale Polarization Relaxation In A Polycrystalline Ferroelectric Thin Film: Role Of Local Environments, V. Nagarajan, S. Aggarwal, Alexei Gruverman, R. Ramesh, R. Waser Jun 2005

Nanoscale Polarization Relaxation In A Polycrystalline Ferroelectric Thin Film: Role Of Local Environments, V. Nagarajan, S. Aggarwal, Alexei Gruverman, R. Ramesh, R. Waser

Alexei Gruverman Publications

In this letter, we report on the study of nanoscale polarization relaxation phenomena in polycrystalline PbZr0.4Ti0.6O3 films. Piezoresponse force microscopy (PFM) images of the as-grown sample reveal grains with a range of contrast, from fully white to gray to fully black. It is shown that this local change in the contrast (magnitude) of the piezoresponse from grain to grain can be attributed to the crystallographic orientation within each grain. PFM-based relaxation experiments show that the rate of relaxation is different for each grain, furthermore it is strongly dependent on the tilt of individual crystallographic orientation …


Giant Electroresistance In Ferroelectric Tunnel Junctions, Mikhail Y. Zhuravlev, Renat F. Sabirianov, Sitaram Jaswal, Evgeny Y. Tsymbal Jun 2005

Giant Electroresistance In Ferroelectric Tunnel Junctions, Mikhail Y. Zhuravlev, Renat F. Sabirianov, Sitaram Jaswal, Evgeny Y. Tsymbal

Physics Faculty Publications

The interplay between the electron transport in metal-ferroelectric-metal junctions with ultrathin ferroelectric barriers and the polarization state of a barrier is investigated. Using a model which takes into account screening of polarization charges in metallic electrodes and direct quantum tunneling across a ferroelectric barrier, we calculate the change in the tunneling conductance associated with the polarization switching. We find the conductance change of a few orders of magnitude for metallic electrodes with significantly different screening lengths. This giant electroresistance effect is the consequence of a different potential profile seen by transport electrons for the two opposite polarization orientations.


Upper Mantle Reflectivity Beneath An Intracratonic Basin: Insights Into The Behavior Of The Mantle Beneath Illinois Basin., Maxwell Sunday Okure Jun 2005

Upper Mantle Reflectivity Beneath An Intracratonic Basin: Insights Into The Behavior Of The Mantle Beneath Illinois Basin., Maxwell Sunday Okure

Theses and Dissertations

Reflectivity images of the lower crust and uppermost mantle beneath the Illinois basin have been derived from reprocessing of several hundred kilometers of industry seismic reflection data using extended vibroseis recorrelation. The recorrelation was based on extending an originally 4-s correlated record, acquired with a 16-s sweep from 14 to 126 Hz, to the absolute limit of the full 20 s (~70 km) listening travel time. The reconstructed bandwidth includes frequency components suitable for imaging structures from signals received from both sedimentary basin reflectors and those received from reflectors in the deep crust and upper mantle. Mantle and sub-Moho reflectors …


Decoherence As A Measure Of Entanglement, Padmanabhan Aravind, Denis Tolkunov, Vladimir Privman Jun 2005

Decoherence As A Measure Of Entanglement, Padmanabhan Aravind, Denis Tolkunov, Vladimir Privman

Padmanabhan K. Aravind

For a solvable pure-decoherence model, we confirm by an explicit model calculation that the decay of entanglement of two state systems (two quibits) is approximately governed by the product of the suppression factors describing decoherence of the subsystems, provided that they are subject to uncorrelated sources of quantum noise. This demonstrates an important physical property that separated open quantum systems can evolve quantum mechanically on time scales larger than the times for which they remain entangled.