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Articles 961 - 990 of 11462
Full-Text Articles in Physical Sciences and Mathematics
Diatom Community Response To Climate Variability Over The Past 37,000 Years In The Sub-Tropics Of The Southern Hemisphere, Sarah Hembrow, Kathryn Taffs, Pia Atahan, Jeffrey Parr, Atun Zawadzki, Henk Heijnis
Diatom Community Response To Climate Variability Over The Past 37,000 Years In The Sub-Tropics Of The Southern Hemisphere, Sarah Hembrow, Kathryn Taffs, Pia Atahan, Jeffrey Parr, Atun Zawadzki, Henk Heijnis
Jeffrey Parr
Climate change is impacting global surface water resources, increasing the need for a deeper understanding of the interaction between climate and biological diversity. This is particularly the case in the Southern Hemisphere sub-tropics, where little information exists on the aquatic biota response to climate variations. Palaeolimnological techniques, in particular the use of diatoms, are well established and can significantly contribute to the understanding of climatic variability and the impacts that change in climate have on aquatic ecosystems. A sediment core from Lake McKenzie, Fraser Island (Australia), was used to investigate interactions between climate influences and aquatic ecosystems. This study utilises …
Occluded C In Rice Phytoliths: Implications To Biogeochemical Carbon Sequestration, Zimin Li, Zhaoliang Song, Jeffrey Parr, Hailong Wang
Occluded C In Rice Phytoliths: Implications To Biogeochemical Carbon Sequestration, Zimin Li, Zhaoliang Song, Jeffrey Parr, Hailong Wang
Jeffrey Parr
Aims: Carbon (C) bio-sequestration within the phytoliths of plants, a mechanism of long-term biogeochemical C sequestration, may play a major role in the global C cycle and climate change. In this study, we explored the potential of C bio-sequestration within phytoliths produced in cultivated rice (Oryza sativa), a well known silicon accumulator.
Methods: The rice phytolith extraction was undertaken with microwave digestion procedures and the determination of occluded C in phytoliths was based on dissolution methods of phytolith-Si.
Results: Chemical analysis indicates that the phytolith-occluded C (PhytOC) contents of the different organs (leaf, stem, sheath and grains) on …
Writing And Peer Review For Advanced Laboratories: A Proposal, Mark Masters, Timothy Grove, Stevens Amidon
Writing And Peer Review For Advanced Laboratories: A Proposal, Mark Masters, Timothy Grove, Stevens Amidon
Stevens R. Amidon Dr.
No abstract provided.
Kinase Inhibitory, Haemolytic And Cytotoxic Activity Of Three Deep-Water Sponges From North Western Australia And Their Fatty Acid Composition, Ana Zivanovic, Natalie J. Pastro, Jane Fromont, Murray Thomson, Danielle Skropeta
Kinase Inhibitory, Haemolytic And Cytotoxic Activity Of Three Deep-Water Sponges From North Western Australia And Their Fatty Acid Composition, Ana Zivanovic, Natalie J. Pastro, Jane Fromont, Murray Thomson, Danielle Skropeta
Danielle Skropeta
The c-AMP dependent protein kinase (PKA) inhibition, haemolytic activity, and cytoxicity of 21 extracts obtained from North Western Australian sponges collected from depths of 84-135 m were investigated. Hexane extracts from Ircinia/Sarcotragus sp. and Geodia sp. displayed PKA inhibitory activities of 100 and 97% respectively (at 100 μg/mL), while aq. methanol extracts from Haliclona sp. exhibited potent haemolytic activity (75%) and hexane extracts from Geodia sp. were highly toxic (88%) to the brine shrimp Artemia franciscana. As the non-polar extracts gave the greatest PKA inhibition, these were further analysed by GC-MS and 29 fatty acids were identified in the highest …
Deep-Sea Natural Products, Danielle Skropeta
Deep-Sea Natural Products, Danielle Skropeta
Danielle Skropeta
This review covers the 390 novel marine natural products described to date from deep-water (>50 m)marine fauna, with details on the source organism, its depth and country of origin, along with anyreported biological activity of the metabolites. Relevant synthetic studies on the deep-sea naturalproducts have also been included.
Misidentification Of Tansy, Tanacetum Macrophyllum, As Yarrow, Achillea Grandifolia: A Health Risk Or Benefit?, Niko Radulovic, Polina Blagojevic, Danielle Skropeta, Aleksandra Zarubica, Bojan Zlatkovic, Radosav Palic´
Misidentification Of Tansy, Tanacetum Macrophyllum, As Yarrow, Achillea Grandifolia: A Health Risk Or Benefit?, Niko Radulovic, Polina Blagojevic, Danielle Skropeta, Aleksandra Zarubica, Bojan Zlatkovic, Radosav Palic´
Danielle Skropeta
Tansy, Tanacetum macrophyllum (Waldst. & Kit.) Sch. Bip., is often misidentified by herb collectors as yarrow, Achillea grand folia Friv. With the former, cases of poisoning induced by its ingestion are well documented, but the latter is widely used for ethnopharmacological purposes. The aim of this study was to estimate, based on the volatile metabolite profiles of the two species, the potential health risk connected with their misidentification. GC and GC-MS analysis of the essential oils hydrodistilled using a Clevenger-type apparatus from A. grandifolia, T macrophyllum, and two plant samples (reputedly of A. grandifolia, but in fact mixtures of A. …
Anti-Cancer Activity Of An Acid-Labile N-Alkylisatin Conjugate Targeting The Transferrin Receptor, Vineesh Indira Chandran, Lidia Matesic, Julie Locke, Danielle Skropeta, Marie Ranson, Kara Vine
Anti-Cancer Activity Of An Acid-Labile N-Alkylisatin Conjugate Targeting The Transferrin Receptor, Vineesh Indira Chandran, Lidia Matesic, Julie Locke, Danielle Skropeta, Marie Ranson, Kara Vine
Danielle Skropeta
We have previously reported a series of pH-sensitive imine-linked N-alkylisatin prodrugs that are stable at pH 7.4, but readily cleaved at pH 4.5. Herein, one of the most potent prodrugs, 5,7-dibromo-N-(pmethoxybenzyl) isatin (NAI), was functionalized with a para-phenylpropionic acid linker, and the resulting NAI–imine prodrug conjugated to transferrin (Tf) to form a NAI–imine–Tf conjugate. Cytotoxicity assays revealed the conjugate was equipotent to the free drug against MCF-7 breast cancer cells, with clear selectivity patterns based on TfR levels. These results suggest that this novel isatin-based cytotoxin conjugated to a tumor targeting protein via an acid-labile linker warrants further preclinical testing.
Synthesis Of Novel Sugar Diamino Acids, M Thillakan, A Katsifis, D Skropeta
Synthesis Of Novel Sugar Diamino Acids, M Thillakan, A Katsifis, D Skropeta
Danielle Skropeta
Sugar amino acids (SAAs) are found in nature as good construction elements for the preparation of peptide mimetics and oiigosaccharides in drug design and development. The synthesis of SAAs is readily accomplished in few steps and more than 40 SAAs have been synthesised to date.2 Sugar amino acids with an additional amino group, the sugar diamino acid (SDAs) would represent a useful expansion to the library of SAAs available because one of the amino group and carboxylic acid is available for peptide coupling and the another amino/azide group allow to do further derivatisation via peptide or click chemistry such as …
Kinase Inhibitors From Marine Sponges, Danielle Skropeta, Natalie Pastro, Ana Zivanovic
Kinase Inhibitors From Marine Sponges, Danielle Skropeta, Natalie Pastro, Ana Zivanovic
Danielle Skropeta
Protein kinases play a critical role in cell regulation and their deregulation is a contributing factor in an increasing list of diseases including cancer. Marine sponges have yielded over 70 novel compounds to date that exhibit significant inhibitory activity towards a range of protein kinases. These compounds, which belong to diverse structural classes, are reviewed herein, and ordered based upon the kinase that they inhibit. Relevant synthetic studies on the marine natural product kinase inhibitors have also been included.
The Effect Of Individual N-Glycans On Enzyme Activity, Danielle Skropeta
The Effect Of Individual N-Glycans On Enzyme Activity, Danielle Skropeta
Danielle Skropeta
No abstract provided.
Structures, Biological Activities And Phylogenetic Relationships Of Terpenoids From Marine Ciliates Of The Genus Euplotes, Graziano Guella, Danielle Skropeta, Graziano Di Giuseppe, Fernando Dini
Structures, Biological Activities And Phylogenetic Relationships Of Terpenoids From Marine Ciliates Of The Genus Euplotes, Graziano Guella, Danielle Skropeta, Graziano Di Giuseppe, Fernando Dini
Danielle Skropeta
In the last two decades, large scale axenic cell cultures of the marine species comprising the family Euplotidae have resulted in the isolation of several new classes of terpenoids with unprecedented carbon skeletons including the (i) euplotins, highly strained acetylated sesquiterpene hemiacetals; (ii) raikovenals, built on the bicyclo[3.2.0]heptane ring system; (iii) rarisetenolides and focardins containing an octahydroazulene moiety; and (iv) vannusals, with a unique C-30 backbone. Their complex structures have been elucidated through a combination of nuclear magnetic resonance spectroscopy, mass spectrometry, molecular mechanics and quantum chemical calculations. Despite the limited number of biosynthetic experiments having been performed, the large …
Domino Pericyclic Reactions Of Acyclic Conjugated (E,Z,E,E)-Tetraenes, Danielle Skropeta, Rodney Rickards
Domino Pericyclic Reactions Of Acyclic Conjugated (E,Z,E,E)-Tetraenes, Danielle Skropeta, Rodney Rickards
Danielle Skropeta
No abstract provided.
N-Phenethyl And N-Naphthylmethyl Isatins And Analogues As In Vitro Cytotoxic Agents, John Bremner, Stephen Pyne, Marie Ranson, Danielle Skropeta, Julie Locke, Lidia Matesic, Kara Perrow
N-Phenethyl And N-Naphthylmethyl Isatins And Analogues As In Vitro Cytotoxic Agents, John Bremner, Stephen Pyne, Marie Ranson, Danielle Skropeta, Julie Locke, Lidia Matesic, Kara Perrow
Danielle Skropeta
Arange of N-phenethyl,N-phenacyl, and N-(1- and 2-naphthylmethyl) derivatives of 5,7-dibromoisatin 2 were prepared byN-alkylation reactions. Their activity against human monocyte-like histiocytic lymphoma (U937), leukemia (Jurkat), and breast carcinoma (MDA-MB-231) cell lines was assessed. The results allowed further development of structureactivity relationships. The compound 5,7-dibromo-N-(1-naphthylmethyl)-1H-indole-2,3-dione 5a was the most potent against U937 cells with an IC50 value of 0.19 microM.
Exploring Marine Resources For New Pharmaceutical Applications, Danielle Skropeta
Exploring Marine Resources For New Pharmaceutical Applications, Danielle Skropeta
Danielle Skropeta
No abstract provided.
Complete Assignment Of The 1h And 13c Nmr Spectra Of Antimicrobial 4-Arylamino- 3-Nitrocoumarin Derivatives, Vidoslav Dekic, Niko Radulovic, Rastko Vukicevic, Biljana Dekic, Danielle Skropeta, Radosav Palic
Complete Assignment Of The 1h And 13c Nmr Spectra Of Antimicrobial 4-Arylamino- 3-Nitrocoumarin Derivatives, Vidoslav Dekic, Niko Radulovic, Rastko Vukicevic, Biljana Dekic, Danielle Skropeta, Radosav Palic
Danielle Skropeta
No abstract provided.
Synthesis And Hydrolytic Evaluation Of Acid-Labile Imine-Linked Cytoxic Isatin Model Systems, Lidia Matesic, Julie Locke, Kara Perrow, Marie Ranson, John Bremner, Danielle Skropeta
Synthesis And Hydrolytic Evaluation Of Acid-Labile Imine-Linked Cytoxic Isatin Model Systems, Lidia Matesic, Julie Locke, Kara Perrow, Marie Ranson, John Bremner, Danielle Skropeta
Danielle Skropeta
In this study a series of isatin-based, pH-sensitive aryl imine derivatives with differing aromatic substituents and substitution patterns were synthesised and their acid-catalysed hydrolysis evaluated. These derivatives were functionalised at the C3 carbonyl group of a potent N-substituted isatin cytotoxin and were stable at physiological pH but readily cleaved at pH 4.5. Observed rates of hydrolysis for the embedded imine-acid moiety were in the order para-phenylpropionic acid>phenylacetic acid (para>meta)>benzoic acid (meta>para). The ability to fine-tune hydrolysis rates in this way has potential implications for optimising imine linked, tumour targeting cytotoxin-protein conjugates
Average Mass Scan Of The Total Ion Chromatogram Versus Percentage Chemical Composition In Multivariate Statistical Comparison Of Complex Volatile Mixtures, Niko Radulovic, Polina Blagojevic, Danielle Skropeta
Average Mass Scan Of The Total Ion Chromatogram Versus Percentage Chemical Composition In Multivariate Statistical Comparison Of Complex Volatile Mixtures, Niko Radulovic, Polina Blagojevic, Danielle Skropeta
Danielle Skropeta
The analysis of complex volatile mixtures by gas chromatography-mass spectrometry (GC-MS) is a time-consuming process. It involves separation and identification of the components based on their retention times and fragmentation patterns, followed by determination of their relative percentages from integration of their peak areas. Herein we show that multivariate statistical analysis of the relative abundances of the m/z values obtained from the average mass scans (AMS) of the complex mixture is a faster and potentially more reliable method of assessing these mixtures. To achieve this, 15 model complex mixtures, were prepared comprising varying amounts of 10 different constituents. The AMS …
Synthesis And Anti-Leukaemic Activity Of Pyrrolo[3,2,1-Hi]Indole-1,2- Diones, Pyrrolo[3,2,1-Ij]Quinoline-1,2-Diones And Other Polycyclic Isatin Derivatives, Lidia Matesic, Julie M. Locke, Kara Vine, Marie Ranson, John B. Bremner, Danielle Skropeta
Synthesis And Anti-Leukaemic Activity Of Pyrrolo[3,2,1-Hi]Indole-1,2- Diones, Pyrrolo[3,2,1-Ij]Quinoline-1,2-Diones And Other Polycyclic Isatin Derivatives, Lidia Matesic, Julie M. Locke, Kara Vine, Marie Ranson, John B. Bremner, Danielle Skropeta
Danielle Skropeta
To further expand the structure–cytotoxic activity relationships of isatin derivatives and to reduce flexibility in substituent groups at nitrogen, 20 analogues incorporating a ring system between the N1 and C7 atoms of isatin were prepared using a variety of synthetic strategies. This yielded pyrroloindole-, pyrroloquinoline-, pyrroloacridine-, pyrrolophenanthridine- and benzopyrrolophenanthridine-based systems with embedded isatin moieties, the latter possessing a novel carbon skeleton. These compounds were subsequently assessed for their in vitro cytotoxicity against human U937 lymphoma cells, with the brominated pyrroloacridine dione 27 showing the most promising activity (IC50 3.01 μM) after 24 h.
N-Glycolisation Regulates Endothelial Lipase-Mediated Phospholipid Hydrolysis In Apoe- And Apoa-I-Containing High Density Lipoproteins, Danielle Skropeta, Daniel Rader, Weijun Jin, Monica Mcmahon, Kate Shearston, Philip Barter, Kristine Mcgrath, Kerry-Anne Rye, Chatri Settasatian, Daniela Caiazza
N-Glycolisation Regulates Endothelial Lipase-Mediated Phospholipid Hydrolysis In Apoe- And Apoa-I-Containing High Density Lipoproteins, Danielle Skropeta, Daniel Rader, Weijun Jin, Monica Mcmahon, Kate Shearston, Philip Barter, Kristine Mcgrath, Kerry-Anne Rye, Chatri Settasatian, Daniela Caiazza
Danielle Skropeta
No abstract provided.
Cytotoxic And Anticancer Activities Of Isatin And Its Derivatives: A Comprehensive Review From 2000-2008, Marie Ranson, Danielle Skropeta, Julie Locke, Lidia Matesic, Kara Perrow
Cytotoxic And Anticancer Activities Of Isatin And Its Derivatives: A Comprehensive Review From 2000-2008, Marie Ranson, Danielle Skropeta, Julie Locke, Lidia Matesic, Kara Perrow
Danielle Skropeta
No abstract provided.
Fatty And Volatile Oils Of The Gypsywort Lycopus Europaeus L. And The Gaussian-Like Distribution Of Its Wax Alkanes, Niko Radulovic, Marija Denic, Zorica Stojanovic-Radic, Danielle Skropeta
Fatty And Volatile Oils Of The Gypsywort Lycopus Europaeus L. And The Gaussian-Like Distribution Of Its Wax Alkanes, Niko Radulovic, Marija Denic, Zorica Stojanovic-Radic, Danielle Skropeta
Danielle Skropeta
The detailed analyses of the volatile essential oil and lipid profiles of the aerial parts from the blooming and fruit-forming stages of both ripe and unripe fruit of Lycopus europaeus (Lamiaceae) are presented. Both of these profiles are distinguished by components with a restricted occurrence in the Plant Kingdom. These rare compounds include (E)-hotrienol in the volatiles, numerous unusual fatty acids (such as very long chain, odd-numbered and branched-chain) in the bound lipids and a high amount of iso- and anteiso-alkanes in the epicuticular waxes. Furthermore, a Gaussian-like distribution of the relative amounts of the epicuticular wax alkanes was observed. …
Chemotaxonomy Of The Peppergrass Lepidium Coronopus (L.) Al-Shehbaz (Syn. Coronopus Squamatus) Based On Its Volatile Glucosinolate Autolysis Products, Niko Radulovic, Bojan Zlatkovic, Danielle Skropeta, Radosav Palic´
Chemotaxonomy Of The Peppergrass Lepidium Coronopus (L.) Al-Shehbaz (Syn. Coronopus Squamatus) Based On Its Volatile Glucosinolate Autolysis Products, Niko Radulovic, Bojan Zlatkovic, Danielle Skropeta, Radosav Palic´
Danielle Skropeta
The genus Lepidium comprises approximately 175 different plant species commonly referred to as peppergrasses or pepperworts ( Al-Shehbaz, 1997 and Mummenhoff et al., 2001), which occur worldwide apart from the polar regions where they are considered rare in the Arctic and are absent from Antarctica. Lepidium is a comparatively large genus belonging to the mustard family Brassicaceae. Lepidium coronopus (L.) Al-Shehbaz, a representative of the genus, is a herbaceous annual to biennial plant that belongs to the tribe Lepidieae and has previously been described by the following synonymous species: Coronopus squamatus (Forsskal) Ascherson; C. squamatus subsp. conradi (Muschler) Maire; C. …
Learning How To Be An Academic - The Story Of A New Academic In The Sciences, Danielle Skropeta
Learning How To Be An Academic - The Story Of A New Academic In The Sciences, Danielle Skropeta
Danielle Skropeta
No abstract provided.
Solid-State And Solution-Phase Conformations Of Pseudoproline-Containing Dipeptides, James R. Cochrane, Nima Sayyadi, Danielle Skropeta, Peter Turner, Jack K. Clegg, Katrina A. Jolliffe
Solid-State And Solution-Phase Conformations Of Pseudoproline-Containing Dipeptides, James R. Cochrane, Nima Sayyadi, Danielle Skropeta, Peter Turner, Jack K. Clegg, Katrina A. Jolliffe
Danielle Skropeta
The conformations of 14 threonine-derived pseudoproline-containing dipeptides (including four d-allo-Thr derivatives) have been investigated by NMR. In solution, the major conformer observed for all dipeptides is that in which the amide bond between the pseudoproline and the preceding amino acid is cis. For dipeptides in which the N-terminus is protected, the ratio of cis- to trans-conformers does not depend significantly on the side chain of the N-terminal amino acid, or the stereochemistry of the Thr residue. However, for dipeptides bearing a free N-terminus, there are significant differences in the ratios of cis- to trans-conformers depending on the side chain present. …
U.S. Drought Monitor, November 5, 2013, David Simeral
U.S. Drought Monitor, November 5, 2013, David Simeral
United States Agricultural Commodities in Drought Archive
Drought map of U.S. for November 5, 2013 (11/5/13) plus: U.S. crop areas experiencing drought (map), Approximate percentage of crop located in drought, by state (bar graph), Percent of crop area located in drought, past 52 weeks (line graph) for: Corn, Soybeans, Hay, Cattle, Winter wheat.
Rigidity Analysis Of Protein Biological Assemblies And Periodic Crystal Structures, Filip Jagodzinski, Pamela Clark, Jessica Grant, Tiffany Liu, Samantha Monastra, Ileana Streinu
Rigidity Analysis Of Protein Biological Assemblies And Periodic Crystal Structures, Filip Jagodzinski, Pamela Clark, Jessica Grant, Tiffany Liu, Samantha Monastra, Ileana Streinu
All Faculty Scholarship for the College of the Sciences
Background
We initiate in silico rigidity-theoretical studies of biological assemblies and small crystals for protein structures. The goal is to determine if, and how, the interactions among neighboring cells and subchains affect the flexibility of a molecule in its crystallized state. We use experimental X-ray crystallography data from the Protein Data Bank (PDB). The analysis relies on an effcient graph-based algorithm. Computational experiments were performed using new protein rigidity analysis tools available in the new release of our KINARI-Web server http://kinari.cs.umass.edu.
Results
We provide two types of results: on biological assemblies and on crystals. We found that when only isolated …
Thiol-Containing Compounds For The Removal Of Elements From Tissues And Formulations Therefor, Boyd E. Haley, David A. Atwood, Niladri Gupta
Thiol-Containing Compounds For The Removal Of Elements From Tissues And Formulations Therefor, Boyd E. Haley, David A. Atwood, Niladri Gupta
Chemistry Faculty Patents
Methods and pharmaceutical formulations for ameliorating heavy metal toxicity and/or oxidative stress are disclosed, comprising administering pharmaceutically effective amounts of ligands according to the present disclosure.
To see the remainder of the abstract, please download this patent.
A Novel Defense Mechanism Against Web Crawler Intrusion, Alireza Aghamohammadi
A Novel Defense Mechanism Against Web Crawler Intrusion, Alireza Aghamohammadi
Master's Theses and Doctoral Dissertations
Web robots also known as crawlers or spiders are used by search engines, hackers and spammers to gather information about web pages. Timely detection and prevention of unwanted crawlers increases privacy and security of websites. In this research, a novel method to identify web crawlers is proposed to prevent unwanted crawler to access websites. The proposed method suggests a five-factor identification process to detect unwanted crawlers. This study provides the pretest and posttest results along with a systematic evaluation of web pages with the proposed identification technique versus web pages without the proposed identification process. An experiment was performed with …
A Forensic Comparison: Windows 7 And Windows 8, Peter J. Wilson
A Forensic Comparison: Windows 7 And Windows 8, Peter J. Wilson
Theses
Whenever a new operating system or new version of an operating system is released, forensic investigators must re-examine the new operating system or new version. They do so to determine if there are significant differences that will impact and change the way they perform their investigations. With the release of Microsoft's latest operating system, Windows 8, and its update, Windows 8.1, understanding the similarities and differences between Windows 8 and previous operating systems such as Windows 7 is critical. This paper forensically examines Windows 7 and Windows 8 to determine those similarities and differences.
Where To Find 1.5 Million Yr Old Ice For The Ipics "Oldest Ice" Ice Core, H. Fischer, J. Severinghaus, E. Brook, E. Wolff, M. Albert
Where To Find 1.5 Million Yr Old Ice For The Ipics "Oldest Ice" Ice Core, H. Fischer, J. Severinghaus, E. Brook, E. Wolff, M. Albert
Dartmouth Scholarship
Abstract. The recovery of a 1.5 million yr long ice core from Antarctica represents a keystone of our understanding of Quaternary climate, the progression of glaciation over this time period and the role of greenhouse gas cycles in this pro- gression. Here we tackle the question of where such ice may still be found in the Antarctic ice sheet. We can show that such old ice is most likely to exist in the plateau area of the East Antarctic ice sheet (EAIS) without stratigraphic distur- bance and should be able to be recovered after careful pre- site selection studies. Based …