Physical Sciences and Mathematics Commons^™

Scaling The Isam Land Surface Model Through Parallelization Of Inter-Component Data Transfer, Phil Miller, Michael Robson, Bassil El-Masri, Rahul Barman, Gengbin Zheng, Atul Jain, Laxmikant Kalé

Computer Science: Faculty Publications

We present the progression of developments necessary to scale the ISAM landsurface model from single nodes and small clusters with unusually largeper-node memory to much larger systems with more common configurations. These efforts include load balancing, conventional library-based output parallelization to reduce memory load, and parallel-in-time data input. OnHopper, a Cray XE6 machine, the result was strong scaling from 256 cores to 16k coreswith an efficiency of 32.9%. On Edison, a Cray XC30 machine, thecode strong scales from 256 cores to 16k coreswith an efficiency of 51.4%. These large-scale gains, and the associated performance increases at smaller scale, enable greater …

Association Of Weekly Suicide Rates With Temperature Anomalies In Two Different Climate Types, Paul Grady Dixon Ph.D., Mark Sinyor, Ayal Schaffer, Anthony Levitt, Christa R. Haney, Kelsey N. Ellis, Scott C. Sheridan

Geosciences Faculty Publications

Annual suicide deaths outnumber the total deaths from homicide and war combined. Suicide is a complex behavioral endpoint, and a simple cause-and-effect model seems highly unlikely, but relationships with weather could yield important insight into the biopsychosocial mechanisms involved in suicide deaths. This study has been designed to test for a relationship between air temperature and suicide frequency that is consistent enough to offer some predictive abilities. Weekly suicide death totals and anomalies from Toronto, Ontario, Canada (1986-2009) and Jackson, Mississippi, USA (1980-2006) are analyzed for relationships by using temperature anomaly data and a distributed lag nonlinear model. For both …

Investigations Of Potential Microbial Methanogenic And Carbon Monoxide Utilization Pathways In Ultra-Basic Reducing Springs Associated With Present-Day Continental Serpentinization: The Tablelands, Nl, Can, Penny L. Morrill, William J. Brazelton, Lukas Kohl, Amanda Rietze, Sarah M. Miles, Heidi Kavanagh, Matthew O. Schrenk, Susan E. Ziegler, Susan Q. Lang

Faculty Publications

Ultra-basic reducing springs at continental sites of serpentinization act as portals into the biogeochemistry of a subsurface environment with H2 and CH4 present. Very little, however, is known about the carbon substrate utilization, energy sources, and metabolic pathways of the microorganisms that live in this ultra-basic environment. The potential for microbial methanogenesis with bicarbonate, formate, acetate, and propionate precursors and carbon monoxide (CO) utilization pathways were tested in laboratory experiments by adding substrates to water and sediment from the Tablelands, NL, CAD, a site of present-day continental serpentinization. Microbial methanogenesis was not observed after bicarbonate, formate, acetate, or propionate addition. …

Crystal Graphs, Tokuyama's Theorem, And The Gindikin-Karpelevic Formula For G2, Holley Friedlander, Louis Gaudet, Paul E. Gunnells

Paul Gunnells

We conjecture a deformation of the Weyl character formula for type G2 in the spirit of Tokuyama’s formula for type A . Using our conjecture, we prove a combinatorial version of the Gindikin–Karpelevič formula for G2 , in the spirit of Bump–Nakasuji’s formula for type A .

Serving Military Families: Perceptions Of Educational Counseling In A Virtual Environment, Taryn Stevenson

CCE Theses and Dissertations

The advances in communication technology over the past 20 years have significant implications for the delivery of psycho-educational therapeutic services to populations that have been historically underserved due to remote locations lacking trained providers. One such population is military families, who also suffer from a negative stigma of asking for outside help or education for personal growth. This population also faces increasing mental health needs due to military deployment in Operation Iraqi Freedom (OIF) and Operation Enduring Freedom (OEF). These operations have increased the number of returning service members who have been physically and mentally injured. The effect that these …

Marginal Coral Populations: The Densest Known Aggregation Of Pocillopora In The Galápagos Archipelago Is Of Asexual Origin, Iliana B. Baums, Meghann Devlin-Durante, Beatrice A. A. Laing, Joshua S. Feingold, Tyler B. Smith, Andrew Bruckner, Joao Monteiro

Marine & Environmental Sciences Faculty Articles

Coral populations at distributional margins frequently experience suboptimal and variable conditions. Recurrent El Niño-Southern Oscillation (ENSO) warming events have caused extensive mortality of reef-building corals in the Eastern Pacific, and particularly impacted branching pocilloporid corals in the Galápagos Islands. Pocillopora spp. were previously more common and formed incipient reefs at several locations in the archipelago but now occur as scattered colonies. Here, we report an unusually concentrated aggregation of colonies and evaluate their current genetic diversity. In particular we focus on a large population of 1614 live Pocillopora colonies found in a volcanic lagoon along the southern shore of Isabela …

Habitat Use Of The Key Largo Woodrat (Neotoma Floridana Smalli), Lauren J. Barth

FIU Electronic Theses and Dissertations

Key Largo woodrats are an endangered subspecies with an extremely limited habitat. This study sought to understand woodrat habitat preferences in order to guide management. Woodrats build stick nests from natural and artificial materials, so nest distribution and nest occupancy were used as indicators of preference. Distribution was determined by nest surveys, and remote cameras were used to assess occupancy. Forest structure, human disturbance, nest, and animal presence metrics were also collected. More nests were found along abandoned roads than along forest transects and more artificial nests were occupied than natural nests. These findings indicate that woodrats prefer areas with …

Information System Security Commitment: A Study Of External Influences On Senior Management, Kevin Andrew Barton

CCE Theses and Dissertations

This dissertation investigated how senior management is motivated to commit to information system security (ISS). Research shows senior management participation is critical to successful ISS, but has not explained how senior managers are motivated to participate in ISS. Information systems research shows pressures external to the organization have greater influence on senior managers than internal pressures. However, research has not fully examined how external pressures motivate senior management participation in ISS. This study addressed that gap by examining how external pressures motivate senior management participation in ISS through the lens of neo-institutional theory. The research design was survey research. Data …

U.S. Drought Monitor, November 11, 2014, Matthew Rosencrans

United States Agricultural Commodities in Drought Archive

Drought map of U.S. for November 11, 2014 (11/11/14) plus: U.S. crop areas experiencing drought (map), Approximate percentage of crop located in drought, by state (bar graph), Percent of crop area located in drought, past 52 weeks (line graph) for: Corn, Soybeans, Hay, Cattle, Winter wheat.

Facile Electrochemical Synthesis Of Antimicrobial Tio2 Nanotube Arrays, Yu Zhao, Qi Xing, Jagadeesh Janjanam, Kun He, Fei Long, Ke-Bin Low, Ashutosh Tiwari, Feng Zhao, Reza Shahbazian-Yassar, Tolou Shokuhfar

Department of Chemistry Publications

Infection-related complications have been a critical issue for the application of titanium orthopedic implants. The use of Ag nanoparticles offers a potential approach to incorporate antimicrobial properties into the titanium implants. In this work, a novel and simple method was developed for synthesis of Ag (II) oxide deposited TiO₂ nanotubes (TiNTs) using electrochemical anodization followed by Ag electroplating processes in the same electrolyte. The quantities of AgO nanoparticles deposited in TiNT were controlled by selecting different electroplating times and voltages. It was shown that AgO nanoparticles were crystalline and distributed throughout the length of the nanotubes. Inductively coupled plasma …

Measuring The Shock-Heating Rate In The Winds Of O Stars Using X-Ray Line Spectra, David H. Cohen, Zequn Li , '16, K. G. Gayley, S. P. Owocki, J. O. Sundqvist, V. Petit, M. A. Leutenegger

Physics & Astronomy Faculty Works

We present a new method for using measured X-ray emission line fluxes from O stars to determine the shock-heating rate due to instabilities in their radiation-driven winds. The high densities of these winds means that their embedded shocks quickly cool by local radiative emission, while cooling by expansion should be negligible. Ignoring for simplicity any non-radiative mixing or conductive cooling, the method presented here exploits the idea that the cooling post-shock plasma systematically passes through the temperature characteristic of distinct emission lines in the X-ray spectrum. In this way, the observed flux distribution among these X-ray lines can be used …

Cosm News, Georgia Southern University

College of Science and Mathematics News (2012-2019)

• COSM Faculty Appointed to CSIS

Light Transport In Pt-Invariant Photonic Structures With Hidden Symmetries, M. H. Teimourpour, Ramy El-Ganainy, A. Eisfeld, A. Szameit, Demetrios N. Christodoulides

Department of Physics Publications

We introduce a recursive bosonic quantization technique for generating classical PT photonic structures that possess hidden symmetries and higher order exceptional points. We study light transport in these geometries and we demonstrate that perfect state transfer is possible only for certain initial conditions. Moreover, we show that for the same propagation direction, left and right coherent transports are not symmetric with field amplitudes following two different trajectories. A general scheme for identifying the conservation laws in such PT-symmetric photonic networks is also presented.

Recoiling Supermassive Black Holes: A Search In The Nearby Universe, Davide Lena, Andrew Edward Robinson, Alessandro Marconi, David J. Axon, Alessandro Capetti, David Merritt, Daniel P. Batcheldor

Aerospace, Physics, and Space Science Faculty Publications

The coalescence of a binary black hole can be accompanied by a large gravitational recoil due to anisotropic emission of gravitational waves. A recoiling supermassive black hole (SBH) can subsequently undergo long-lived oscillations in the potential well of its host galaxy, suggesting that offset SBHs may be common in the cores of massive ellipticals. We have analyzed Hubble Space Telescope archival images of 14 nearby core ellipticals, finding evidence for small (≲ 10 pc) displacements between the active galactic nucleus (AGN; the location of the SBH) and the center of the galaxy (the mean photocenter) in 10 of them. Excluding …

Identifying Genetic Variants For Heart Rate Variability In The Acetylcholine Pathway, Harriëtte Riese, Loretto M. Muñoz, Catharina A. Hartman, Xiuhua Ding, Shaoyong Su, Albertine J. Oldehinkel, Arie M. Van Roon, Peter J. Van Der Most, Joop Lefrandt, Ron T. Gansevoort, Pim Van Der Harst, Niek Verweij, Carmilla M. M. Licht, Dorret I. Boomsma, Jouke-Jan Hottenga, Gonneke Willemsen, Brenda W. J. H. Penninx, Ilja M. Nolte, Eco J. C. De Geus, Xiaoling Wang, Harold Snieder

Biostatistics Faculty Publications

Heart rate variability is an important risk factor for cardiovascular disease and all-cause mortality. The acetylcholine pathway plays a key role in explaining heart rate variability in humans. We assessed whether 443 genotyped and imputed common genetic variants in eight key genes (CHAT, SLC18A3, SLC5A7, CHRNB4, CHRNA3, CHRNA, CHRM2 and ACHE) of the acetylcholine pathway were associated with variation in an established measure of heart rate variability reflecting parasympathetic control of the heart rhythm, the root mean square of successive differences (RMSSD) of normal RR intervals. The association was studied in a …

Triad-Based Role Discovery For Large Social Systems, Derek Doran

Kno.e.sis Publications

The social role of a participant in a social system conceptualizes the circumstances under which she chooses to interact with others, making their discovery and analysis important for theoretical and practical purposes. In this paper, we propose a methodology to detect such roles by utilizing the conditional triad censuses of ego-networks. These censuses are a promising tool for social role extraction because they capture the degree to which basic social forces push upon a user to interact with others in a system. Clusters of triad censuses, inferred from network samples that preserve local structural properties, define the social roles. The …

Short- And Long-Term Trends In Ecological Interactions: From Predator-Prey Interactions To Phanerozoic Diversification, Subhronil Mondal

USF Tampa Graduate Theses and Dissertations

During the last two decades, a broad spectrum of short- and long-term studies on different taxonomic groups has enriched our understanding about how dynamics of taxonomic and ecological diversification have changed through geologic time. There are two major issues that have impacted these studies: the quality and quantity of data used are often insufficient in various ways and the methods used may produce results that are more equivocal than supposed. To investigate these issues more fully, this dissertation focuses on studies on two major aspects: 1) short-term studies examining the nature of successful and unsuccessful predatory attacks on Plio-Pleistocene bivalves; …

Cosm News, Georgia Southern University

College of Science and Mathematics News (2012-2019)

• Graduate Student Completes Research Seminar, MS-APS

A Method To Reduce The Cost Of Resilience Benchmarking Of Selfadaptive Systems, Steve Hernandez

CCE Theses and Dissertations

Ensuring the resilience of self-adaptive systems used in critical infrastructure systems is a concern as their failure has severe societal and financial consequences. The current trends in the growth of the scale and complexity of society's workload demands and the systems built to cope with these demands increases the anxiety surrounding service disruptions. Self-adaptive mechanisms instill dynamic behavior to systems in an effort to improve their resilience to runtime changes that would otherwise result in service disruption or failure, such as faults, errors, and attacks. Thus, the evaluation of a self-adaptive system's resilience is critical to ensure expected operational qualities …

Runoff Generation In A Tropical Dry Forest Watershed: Processes, Patterns And Connectivity, Kegan K. Farrick

Electronic Thesis and Dissertation Repository

The lack of understanding regarding the controls that govern runoff generation in tropical dry forests represent a critical gap in the hillslope and catchment hydrology literature. Tropical dry forests account for approximately 42% of the global tropical forests, but represent less than 1% of the forest hydrology literature. Three complementary studies were undertaken in a small tropical dry forest watershed, Mexico, to assess the controls that govern the retention and release of a rainfall in the catchment as runoff. In the first study, the high soil surface hydraulic conductivities, absence of a water repellent surface and low rainfall intensities during …

A 5', 8-Cyclo-2'-Deoxypurine Lesion Induces Trinucleotide Repeat Deletion Via A Unique Lesion Bypass By Dna Polymerase Β., Meng Xu, Yanhao Lai, Zhongliang Jiang, Michael A. Terzidis, Annalisa Masi, Chryssostomos Chatgilialoglu, Yuan Liu

Department of Chemistry and Biochemistry

5′,8-cyclo-2′-deoxypurines (cdPus) are common forms of oxidized DNA lesions resulting from endogenous and environmental oxidative stress such as ionizing radiation. The lesions can only be repaired by nucleotide excision repair with a low efficiency. This results in their accumulation in the genome that leads to stalling of the replication DNA polymerases and poor lesion bypass by translesion DNA polymerases. Trinucleotide repeats (TNRs) consist of tandem repeats of Gs and As and therefore are hotspots of cdPus. In this study, we provided the first evidence that both (5′R)- and (5′S)-5′,8-cyclo-2′-deoxyadenosine (cdA) in a CAG repeat tract caused CTG repeat deletion exclusively …

The Optical Luminosity Function Of Gamma-Ray Bursts Deduced From Rotse-Iii Observations, X. H. Cui, X. F. Wu, J. J. Wei, F. Yuan, W. K. Zheng, E. W. Liang, C. W. Akerlof, M. C. B. Ashley, H A. Flewelling, E. Göǧüş, T. Güver, Ü. Kızıloǧlu, T. A. Mckay, S. B. Pandey, E. S. Rykoff, W. Rujopakarn, B. E. Schaefer, J. C. Wheeler, Sarah A. Yost

Physics Faculty Publications

We present the optical luminosity function (LF) of gamma-ray bursts (GRBs) estimated from a uniform sample of 58 GRBs from observations with the Robotic Optical Transient Search Experiment III (ROTSE-III). Our GRB sample is divided into two sub-samples: detected afterglows (18 GRBs) and those with upper limits (40 GRBs). We derive R-band fluxes for these two sub-samples 100 s after the onset of the burst. The optical LFs at 100 s are fitted by assuming that the co-moving GRB rate traces the star formation rate. While fitting the optical LFs using Monte Carlo simulations, we take into account the …

Best Practices Of Consuming Linked Open Data, Arbër Beshiri, Joana Mita, Anja Vangieli

UBT International Conference

The term Linked Data is defined as a set of best practices for publishing and interlinking structured data on the web. These best practices were introduced by Tim Berners-Lee and are also known as principles. These best practices are used by the vast majority of data providers leading to the establishment of a global data space known as the web of data. In this paper will analyze and explore the technical principles of Linked Data, the best practices of using Linked Data, some deployed Linked Data applications and use cases to exploit the Web of Data.

Mechatronics In Electrical Efficiency And Environmental Impact, Sherif Hyseni

UBT International Conference

This paper focuses on the mechatronic technology development, and its influent on electrical efficiency with a direct result in cost and environment. Considering the well-known European Union standard “20-20-20” and the possibility and responsibility of Kosovo in this field, the role of energy efficiency has great impact for future directions. This paper refers to a new technology solution for heating that is available on the local market, called “DAIKIN” by analyzing the functionality of this device and its promise to save up to 40% of the heating costs. Implementation of “DAIKIN” technology in state institutions in Prishtina, and also the …

Authentication In Saas By Implementing Double Security Measures, Muhamet Gërvalla, Shkëlqim Berisha

UBT International Conference

Growing trends of services offered in the field of Cloud Computing are increasing on daily basis. These services are divided into three models: Software as a Service (SaaS), Platform as a Service (PaaS) and Infrastructure as a Service (IaaS). Despite this, much interest is shown to the usage of Software as a Service (SaaS) model. This model offers the usage of software’s that are hosted in Cloud that can be accessed by using web browsers or through “thin client”. Security and privacy are two most important problems that can occur in this model. Authentication through password is one of the …

Concept Of Online Assisted Platform For Technologies And Management In Communications – Optimek, Galia Marinova, Vassil Guliashki, Ognyan Chikov

UBT International Conference

The paper describes the concept of a Multimodular Multydisciplinary platform, contacting through unified templates in a Portal with knowledge, with Useful INTERNET resources, in order to provide advanced research and education. Usually the online resources available are mainly in the area of e- and distance education, but still an understanding is missing for the scale and the use of studying and the systematization of the online resource. The new concept has an accent of the useful INTERNET resource and the development of a System of nets to it, in the aim of solving tasks and generating new knowledge in the …

The Impacts Of Cloud Computing And Big Data Applications On Developing World-Based Smallholder Farmers, Nir Kshetri

UBT International Conference

Cloud computing and big data applications are likely to have far-reaching and profound impacts on developing world-based smallholder farmers. Especially, the use of mobile devices to access cloud-based applications is a promising approach to deliver value to smallholder farmers in developing countries since according to the International Telecommunication Union, mobile-cellular penetration in developing countries is expected to reach 90% by the end of 2014. This article examines the contexts, mechanisms, processes and consequences associated with cloud computing and big data deployments in farming activities that could affect the lives of developing world-based smallholder farmers. We analyze the roles of big …

Itu-Prp: Parallel And Distributed Computing Middleware For Java Developers, Enis Spahi, D. Turgay Altilar

UBT International Conference

ITU-PRP provides a Parallel Programming Framework for Java Developers on which they can adapt their sequential application code to operate on a distributed multi-host parallel environment. Developers would implement parallel models, such as Loop Parallelism, Divide and Conquer, Master-Slave and Fork-Join by the help of an API Library provided under framework. Produced parallel applications would be submitted to a middleware called Parallel Running Platform (PRP), on which parallel resources for parallel processing are being organized and performed. The middleware creates Task Plans (TP) according to application’s parallel model, assigns best available resource Hosts, in order to perform fast parallel processing. …

The Analysis Of Composıtıonal Data, A General Overvıew And An Applicatıon With Gdp Data For Albanıan Economy In R Software, Mirjeta (Dëra) Pasha, Edlira Kalemi, Senada Bushati, Anisa Skandaj

UBT International Conference

In the paper “The analysis of compositional data, a general overview and an application with GDP data for Albanian economy in R software" we have studied the principle rules of the compositional data analysis. We have listed some of the fields where we can find and we can apply compositional data analysis. Furthermore there have been treated the main problems that a user will have during the work with coda data. After problems there are a lot of ways and methods in order to avoid those problems and some transformations that really help the coda work. The most important part …

Quantum States Localized On Lagrangian Submanifolds, François Ziegler

Department of Mathematical Sciences Faculty Presentations

Let X be a symplectic manifold and Aut(L) the automorphism group of a Kostant-Souriau line bundle on X. *Quantum states for X*, as defined by J.-M. Souriau in the 1990s, are certain positive-definite functions on Aut(L) or, less ambitiously, on any “large enough” subgroup G of Aut(L). This definition has two major drawbacks: when G = Aut(L) there are no known examples; and when G is a Lie subgroup the notion is far from selective enough. In this talk I’ll introduce the concept of a quantum state *localized at Y *, where Y is a coadjoint orbit of a subgroup …