Physical Sciences and Mathematics Commons^™

Assessing The Impact Of Climate Change On Harbor Seals: Haul-Out Patterns In Iceland Using Cmip6 Projections, Colin Lau

Independent Study Project (ISP) Collection

Harbor seals (Phoca vitulina) are known to exhibit a preference for specific environmental and weather conditions when hauling out, particularly during the pupping and molting cycles during summer. Climate change is projected to have a significant impact on the haul-out patterns and site conditions of harbor seals in Iceland, which could further diminish their dwindling population. A comprehensive literature review was conducted to identify and discuss the environmental variables that can affect haul-out probability. Among them, surface wind speed and air temperature are reported to have the biggest influence on harbor seal haul-out numbers between May and August. Climate projections …

The Role Of Geomorphological Context In Vegetative Succession Within The Breiðamerkurjökull Glacial Foreland, Lucas Nerbonne

Independent Study Project (ISP) Collection

As glaciers retreat worldwide at an accelerating pace, understanding primary succession in these newly exposed landscapes becomes increasingly critical. This study examines the initial vegetative colonization patterns in glacial forelands, focusing on the influence of geomorphological formations of resulting plant communities. By analyzing vegetative communities in glaciofluvial and push moraine deposits, this study highlights how the more varied, channelized morphologies of fluvial deposits create potential microclimates better conducive to heterogenous plant colonization than the homogenous terrain of the nearby push moraine. Vegetative coverage, sediment size, and species abundance was collected at 480 sites across 6 different historical glacial extents across …

Mushroom Composition Across An Elevational Gradient During The 2024 Wet Season In Mazumbai Forest Reserve, Tanzania, Christopher Brady

Independent Study Project (ISP) Collection

Mushrooms are key bioindicators that contribute greatly to ecological health, and their diversity is indicative of a healthy ecosystem. However, even with the vital role they play in ecological health, there are few studies which measure the diversity of mushrooms in Mazumbai Forest Reserve (MFR), Tanzania, Africa, and none which focus on diversity along the elevational gradient within the reserve (1300-1900m). This study measures the diversity and equitability of mushrooms growing in six elevational zones within MFR during the rainy season of 2024. A species checklist of mushrooms growing in MFR during the 2024 rainy season was created, tracking the …

Time Series Models For Predicting Application Gpu Utilization And Power Draw Based On Trace Data, Dorothy Xiaoshuang Parry

Electrical & Computer Engineering Theses & Dissertations

This work explores collecting performance metrics and leveraging various statistical and machine learning time series predictive models on a memory-intensive application, Inception v3. Trace data collected using nvidia-smi measured GPU utilization and power draw for two runs of Inception3. Experimental results from the statistical and machine learning-based time series predictive algorithms showed that the predictions from statistical-based models were unable to capture the complex changes in the trace data. The Probabilistic TNN model provided the best results for the power draw trace, according to the test evaluation metrics. For the GPU utilization trace, the RNN models produced the most accurate …

Climate Change-Associated Declines In Water Clarity Impair Feeding By Common Loons, Walter H. Piper, Max R. Glines, Kevin C. Rose

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Climate change has myriad impacts on ecosystems, but the mechanisms by which it affects individual species can be difficult to pinpoint. One strategy to discover such mechanisms is to identify a specific ecological factor related to survival or reproduction and determine how that factor is affected by climate. Here we used Landsat imagery to calculate water clarity for 127 lakes in northern Wisconsin from 1995 to 2021 and thus investigate the effect of clarity on the body condition of an aquatic visual predator, the common loon (Gavia immer). In addition, we examined rainfall and temperature as potential predictors …

Simultaneous Extraction And Quantitative Analysis Of S-Methyl-L-Cysteine Sulfoxide, Sulforaphane And Glucosinolates In Cruciferous Vegetables By Liquid Chromatography Mass Spectrometry, Armaghan Shafaei, Caroline R. Hill, Jonathan M. Hodgson, Lauren C. Blekkenhorst, Mary C. Boyce

Research outputs 2022 to 2026

Sulfur containing compounds including glucosinolates (GLS), sulforaphane (SFN) and S-methyl-L-cysteine sulfoxide (SMCSO) have been proposed to be partly responsible for the beneficial health effects of cruciferous vegetables. As such, greater understanding of their measurements within foods is important to estimate intake in humans and to inform dietary intervention studies. Herein is described a simple and sensitive method for simultaneous analysis of 20 GLS, SFN and SMCSO by liquid chromatography mass spectrometry. Analytes were effectively retained and resolved on an Xbridge C18 column. Detection can be achieved using high resolution or unit resolution mass spectrometry; the latter making the method more …

Desalination As A Source Of Freshwater, Jacob Pensky

Best Integrated Writing

Jacob Pensky's article deals with technology we use to make saltwater drinkable. Drought-stricken coastal communities need desalination plants, especially as Earth's climate warms, but they are expensive and energy-intensive. This article describes ways to reduce the environmental and monetary costs.

Thermal Ecology And Swimming Performance Of Native Tadpoles Dryophytes Femoralis In Central Florida, Jessalyn Aretz

USF Tampa Graduate Theses and Dissertations

Urbanization and climate warming have contributed to global amphibian declines in recent decades. Amphibians are particularly vulnerable to climate and urban-induced warming because their physiological processes are dependent on temperature across all life stages, but few studies have been done on tadpole responses to warming in comparison to adult responses. The study objective was to determine how the thermal ecology and swimming performance of a native Florida tadpole varied with rearing temperature and urban level, and whether these traits are plastic or adaptive. We collected eggs from wild populations of pine woods treefrog (Dryophytes femoralis) tadpoles at an urban and …

Synthesis, Molecular Characteristics, And Antibacterial Assessment Of Marine Hydroid Aqueous Extract-Based Silver Bio-Nanoparticles, Fredryk Mandey, Aulia Rhamdani Arfan, Rugaiyah Andi Arfah

Makara Journal of Science

This investigation aims to synthesize, analyze the molecularity, and test the ability of bacterial inhibition capability of silver nanoparticles that have been synthesized by simply mixing silver nitrate and aqueous extracts of marine natural products with and without the addition of amylum as a stabilizing agent. This research, with and without the addition of amylum as a stabilizing agent, obtained 39.0 and 55.2 mg of solids of round-shaped morphology silver nanoparticles with diameters of 87.9 and 103.0 nm., respectively. In addition, the antibacterial testing assay against Staphylococcus aureus and Escherichia coli showed some considerably good results. S. aureus with the …

Methionyl-Trna Synthetase Synthetic And Proofreading Activities Are Determinants Of Antibiotic Persistence, Whitney N. Wood, Miguel Angel Rubio, Lorenzo Eugenio Leiva, Gregory J. Phillips, Michael Ibba

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Bacterial antibiotic persistence is a phenomenon where bacteria are exposed to an antibiotic and the majority of the population dies while a small subset enters a low metabolic, persistent, state and are able to survive. Once the antibiotic is removed the persistent population can resuscitate and continue growing. Several different molecular mechanisms and pathways have been implicated in this phenomenon. A common mechanism that may underly bacterial antibiotic persistence is perturbations in protein synthesis. To investigate this mechanism, we characterized four distinct metG mutants for their ability to increase antibiotic persistence. Two metG mutants encode changes near the catalytic site …

03-25-2024 Orsp Newsletter, Liz Williamson

ORSP Newsletter

Cammi Thornton, Compliance Training Requirements

In Silico Analysis Of C-Type Lectins As Co-Infection Receptors Of Dengue And Chikungunya Viruses In Aedes Aegypti, Munawir Sazali, R. C. Hidayat Soesilohadi, Nastiti Wijayanti, Tri Wibawa, Arif Nur Muhammad Ansori

Makara Journal of Science

Aedes aegypti is a primer vector of dengue virus (DENV) and chikungunya virus (CHIKV). The susceptibility of mosquitoes to DENV and CHIKV depends on their recognition receptor of pathogens. C-type lectins (CTLs) are an important mediator of virus infection in A. aegypti. This study aims to identify potential receptors and determine the binding affinity between ligand–receptor interaction, CTLs and virus envelopes (DENV-1, 2, 3, and 4 and CHIKV) interaction based on in silico analysis. Sample sequences were obtained from GenBank (NCBI), and 10 CTLs were acquired from VectorBase. Homology modeling based on a minimum standard of 20% was processed …

Mathematically Modeling How Trapping Regimes That Target Specific Crayfish Life Stages Impact Removal Efficacy, Rini Pattison

Seaver College Research And Scholarly Achievement Symposium

The red swamp crayfish, Procambarus clarkii, is an invasive species introduced into several streams within the Santa Monica Mountains (SMM) in Southern California. Crayfish predation decimates native aquatic species. Thus, the Mountains Restoration Trust (MRT) and Environmental Restoration Group have worked to remove crayfish through regular trapping in Malibu Creek.

To aid conservation efforts, former SURB students William Milligan and Dev Patel developed mathematical models of crayfish removal efficacy. Milligan created a differential equation model of how crayfish removal affects local newt populations. Patel expanded Milligan’s crayfish model by creating a discrete model of the crayfish life cycle that newly …

Coomassie Brilliant Blue Dye As A Method For Analyzing Fracture Markings In Bone, Abigail Hoffmeister, David Harutunyan, Matthew Aizawa, Everett Baker, Brandon Mendoza, Chase Freeman, Siran Iskanian

Seaver College Research And Scholarly Achievement Symposium

Coomassie Brilliant Blue Dye is a dye commonly used to stain proteins. Because of its ability to adhere to proteins, this research has focused on perfecting a method of dyeing a fractured flat bone in order to most accurately observe and analyze fracture markings within the trabecular layer. Stereoscopic microscopy was the chosen technique of analysis for this research because of its proven effectiveness in glass and ceramic fractography to observe varying depths. In order to most effectively apply stereoscopic microscopy to this research, the following variables were manipulated to maximize color contrast in the trabecular layer in order to …

Deep Learning Can Be Used To Classify And Segment Plant Cell Types In Xylem Tissue, Reem Al Dabagh, Benjamin Shin, Sean Wu, Fabien Scalzo, Helen Holmlund, Jessica Lee, Chris Ghim, Samuel Fitzgerald, Marinna Grijalva

Seaver College Research And Scholarly Achievement Symposium

Studies of plant anatomical traits are essential for understanding plant physiological adaptations to stressful environments. For example, shrubs in the chaparral ecosystem of southern California have adapted various xylem anatomical traits that help them survive drought and freezing. Previous studies have shown that xylem conduits with a narrow diameter allows certain chaparral shrub species to survive temperatures as low as -12 C. Other studies have shown that increased cell wall thickness of fibers surrounding xylem vessels improves resistance to water stress-induced embolism formation. Historically, these studies on xylem anatomical traits have relied on hand measurements of cells in light micrographs, …

La1-Xsrxcoo3 Perovskite Nanomaterial: Synthesis, Characterization, And Its Biomedical Application, Adhira Tippur, Anyet Shohag, Luke Franco, Ahmed Touhami, Swati Mohan, Mohammed Uddin

Research Symposium

Early cancer detection is paramount for effective treatment and potential cures. This research explores the application of perovskite materials, specifically Sr2+-doped Lanthanum Cobaltite (La1-xSrxCoO3) nanomaterials, in cancer detection, with a focus on rats as an experimental model. The ferroelectric nature of these materials, synthesized through a combination of sol-gel and molten-salt processes, was examined at varying Sr2+ doping levels (1-20 wt%). Rigorous characterization, employing X-ray diffraction and scanning electron microscopy, confirmed the uniform morphology of nano cubes, laying the foundation for subsequent investigations. The magnetic properties of the perovskite nanoparticles were probed, suggesting their potential as a diagnostic tool for …

Reproduce Or Live Longer?: A Life History Analysis Of Black Bears In A Semiarid Environment, Brenden M. Orocu, Cambria Armstrong, Janene Auger, Hal L. Black, Randy T. Larsen, Brock R. Mcmillan, Mark C. Belk

Library/Life Sciences Undergraduate Poster Competition 2024

In population demographics, each population has an age stage vital rate (fecundity and survival) in its life history that has the greatest influence on the asymptotic population growth rate, λ.

American black bears (Ursus americanus) are found throughout North America. Other studies on population demographics have focused on populations in higher resource availability areas but none in semiarid environments where resource scarcity is a result of the variable climate.

Objective

Our objective was to determine if factors influencing population dynamics of black bears in semi-arid environments were similar to factors affecting population dynamics in mesic environments where …

The Biomechanics Of Ursine Predation: Investigating The Force Generation And Mechanical Properties Of Bear Claws And Teeth In Predatory Behavior, Katie Dooley, Megan Doxey, Josh Jewell, Tom Smith

Library/Life Sciences Undergraduate Poster Competition 2024

• Studied over 2,200 human-bear conflicts in North America and witnessed the shear force that bears can exert to access food and eliminate any threats.
• Polar bears at the Hogle Zoo in Salt Lake City punctured and bent high density polyurethane (HDPE) objects when playing with them.
• This prompted research into the force it takes bears to puncture objects with their canines and claws.

Silvopastoral Agroforestry In Upland And Lowland Uk Grassland: Tree Growth And Animal Performance, W R. Eason, R Lavender, R O. Clements, C Duller, E Gill, M Hislop

IGC Proceedings (1993-2023)

Trees, individually protected from herbivore damage using plastic shelters, were planted at two densities (100 and 400 stems/ha) into sheepgrazed pasture in upland and lowland UK grassland sites in 1988. Tree and animal performance were compared with conventional forestry (no sheep) and pasture (no tree) systems. Effects on tree growth and survival are highly species and site dependent although some treatment effects did emerge. Tree shelters encouraged rapid early height growth compared to forestry controls although in some cases tree form was also adversely affected. Generally tree performance within agroforestry treatments was better at the higher planting density. Eight years …

Use Of Annual Self-Reseeding Legumes In An Oak Forest In Central Italy, P Talamucci, G Argenti, A Pardini, S Piemontese, N Stagliano

IGC Proceedings (1993-2023)

A trial has been carried out for three years in an oak coppice geometrically thinned out of Mediterranean Central Italy, about the functioning of a pastoral system made by four different resources: native pasture, subterranean clover (Trifolium brachycalycinum Katzn. et Morley) in pure stand, strips thinned out and firebreaks improved with oversown subclover, all grazed by sheep. Subclover increased the forage yield and improved the palatabilty of the pasture and the regularity of grazing; the higher biomass intake by animals reduced the quantity of dried biomass in summer and contributed to keep low either fire hazards or flame diffusion …

The Effects Of Shelterbelts On Adjacent Pastures And Soils In A Temperate Climate, A G. Gillingham, M F. Hawke

IGC Proceedings (1993-2023)

Two trials were conducted to differentiate the direct (exposure) from the indirect (modified soil fertility due to nutrient transfer by grazing animals) effects of farm shelterbelts on associated pasture growth.Soil from close to “unmanaged”shelterbelts with dense shelter to ground level had relatively high potassium (K) levels and, in a glasshouse situation, provided more pasture growth than soil from further distances, or from adjacent to “managed” shelterbelts. Pasture grown in boxes of a common soil implanted at increasing distances from a shelterbelt also produced highest growth rates close to shelter. These results generally explain the pattern of resident pasture growth, except …

Temperate Pasture And Sheep Performance Under Radiata Pine And In Open Pasture, K M. Pollock, R J. Lucas, D B. Pownall, S E. Thomson

IGC Proceedings (1993-2023)

Forage production from years 4 to 6 of an agroforestry system at 400-600 trees per ha and pasture alone were compared for a temperate sub-humid environment. Forage production was best for lucerne pasture followed by phalaris/clover and cocksfoot/clover, and least for ryegrass/clover and the ryegrass only pastures. Total pasture production in the agroforest relative to the open pasture was from 10% more for phalaris to 20% less for lucerne. Sheep carrying capacity over all pastures was 14.6 sheep/ha in the open and 11.8 sheep/ha in the agroforest and varied by ±15% according to the pasture types.

Grazing Management Of Tagasaste (Chamaecytisus Proliferus) For Sheep And Cattle Production In Southern Australia, N J. Edwards, G M. Allen, D M. Mcneill, C M. Oldham

IGC Proceedings (1993-2023)

Direct grazing of hedgerows of tagasaste (Chamaecytisus proliferus) by sheep or cattle appear to be very robust systems. Tagasaste persists under a continuous grazing regime with cattle such that plant regrowth maintained between 5 and 10 cm in length produces in excess of 215 kg of animal liveweight/ha/year. This level of production is also sustained within a rotational grazing regime. Under both grazing systems cattle production within a year is highly seasonal, with liveweight gains from young cattle peaking at 1.0-1.5 kg/head/day in winter and spring, but dropping to maintenance only by late summer-autumn. Sheep, like cattle, can …

Shrub Palatability To Rusa Deer (Cervus Timorensis Russa) In New Caledonia, C Corniaux, S Le Bel, J M. Sarrailh

IGC Proceedings (1993-2023)

The objective of this study was to determine a palatability scale of five shrub legumes to rusa deer during the dry season in New Caledonia. Acacia ampliceps and Samanea saman remain low in acceptability. Gliricidia sepium is more palatable but quite less than Leucaena leucocephala (native cultivar) and Calliandra calothyrsus (San Ramon). Therefore, since the regression of Leucaena leucocephala population, Calliandra calothyrsus could be very promising to replace it in the deer diet. On the other hand, Acacia ampliceps seems to be the most interesting shrub legume to plant in the west coast, where soil erosion, due to successive droughts …

Soil Nutrient Redistribution Pattern About The Tree In A Silvopastoral System, L C. Nwaigbo, H G. Miller, A R. Sibbald, G Hudson

IGC Proceedings (1993-2023)

The objective of this paper is to report the effect of animal-tree interactions on soil nutrient redistribution pattern in a grazed silvopastoral experiment site at Glensaugh, in NE Scotland. Scots pine (Pinus sylvestris L) tree species were planted in square lattice arrangements at 5 m x 5 m, spacing (400 stems/ha) on plots replicated over three blocks in Randomized Complete Block design on a predominantly rye grass (Lolium perenne L) pasture which was grazed by sheep yearly from April to October. Included in the design were grazed pasture plots without trees (Control). Soil samples were collected from around …

Trees For Shelter: The Implications In Agroforestry System, L C. Nwaigbo, A R. Sibbald, G Hudson

IGC Proceedings (1993-2023)

The objective of this study was to determine the horizontal and vertical variations in soil penetration resistance (PR) observed at tree-scale in silvopastoral plots that were grazed by sheep with and without trees. Sycamore trees (Acer pseudoplatanus L) were planted in the spring of 1988 at 10 m x 10 m spacing (100 stems/ha) at Glensaugh NE of Scotland on plots replicated over three blocks in Randomized Complete Block design on a predominantly rye grass (Lolium perenne L) pasture. Included in the design were pasture plots without trees (Control). The experiment is grazed by sheep yearly from April to …

A Silvopastoral System In The North Atlantic Zone Of Costa Rica: Combining Indigenous Timber Species With Dairy Pasture Swards, A Moulaert- Quiros, J P. Mueller, M Villarreal, R Piedra, L Villalobos

IGC Proceedings (1993-2023)

The objective of this study was to design, establish and monitor a silvo pastoral experiment on a dairy farm in the northern Atlantic region of Costa Rica. Indigenous timber species, Vochysia guatemalensis and Hyeronima alchorneoides were used together with or without the tropical pasture legume, Arachis pintoi in a split plot design with a 4 x 2 x 2 factorial arrangement. First year establishment was good for the tree component (2.3 to 10 % mortality) but poor for A. pintoi (4 to 5 % of sward). Poor legume establishment was attributed to lax grazing management and excess competition from existing …

Productivity Of Three Tree Legumes Grazed By Cattle, R C. Gutterridge

IGC Proceedings (1993-2023)

Three tree legumes Albizia chinensis, Leucaena leucocephala K 636 and Tipuana tipu were grown in conjunction with the grass Brachiaria decumbens and grazed by weaner cattle at a stocking rate of 2.5 animals per hectare for a total of 447 days. Albizia was best adapted to this acidic, poorly drained site in south east Queensland giving the highest yields of edible dry matter, high survival rate and moderate liveweight gains of 0.45 kg/head/day. The productivity of L. leucocephala K 636 was always poor but it gave the highest liveweight gains of all treatments in the first 280 days of grazing, …

Morphological And Physiological Response Of Planeleaf Willow (Salix Planifolia Pursh.) To Simulated Browsing, L Xu, J L. Dodd, M A. Smith, Q D. Skinner, W A. Laycock

IGC Proceedings (1993-2023)

Morphological and physiological responses of planeleaf willow (Salix planefolia Pursh.) to simulated browsing were studied under controlled conditions. The treatments consisted of every combination of three clipping intensities (30%, 60% and 90% of current twigs length removal) and three clipping timings (late winter, early spring and mid-summer). Increased clipping intensity stimulated bud activation; increased total leaf area and leaf size and increased the length of current year’s twigs. Mid-summer browsing increased the total number of leaves, the number of current twigs and decreased the length of current twigs. Higher browsing intensity resulted in higher photosynthetic rate of recently matured …

Psyllid Resistance In The Leucaena Genus, B F. Mullen, H M. Shelton, F Gabunada, W W. Stur

IGC Proceedings (1993-2023)

Leucaena species varied from highly susceptible to highly resistant in their response to the psyllid insect (Heteropsylla cubana) at 2 sites, a high psyllid environment at Brisbane, Australia and a moderate psyllid environment at Los Baños, Philippines. L. leucocephala was the most susceptible species. There was considerable intraspecific variation in psyllid resistance within L. collinsii, L. diversifolia and L. pallida. Plant reponse to psyllid challenge between environments was highly correlated but not linear. The higher psyllid challenge environment at Brisbane permitted greater discrimination between species and fewer Leucaena species were ranked as psyllid resistant.