Physical Sciences and Mathematics Commons^™

The Geophysical Kitchen Sink Approach To Improving Our Understanding Of Volcano-Tectonic Interactions, Ophelia Ann George

USF Tampa Graduate Theses and Dissertations

A multi-prong approach was taken in this dissertation to understand volcanic processes from both a long-term and more immediate hazard perspective. In the long-term, magma sources within the crust may produce measurable surficial response and long-wavelength gravity anomalies that provide information about the extent and depth of this magma. Long-term volcanic hazard forecasting is also improved by developing as complete a record as possible of past events. In the short-term, a long-standing question has been on the casting of precursory volcanic activity in terms of future volcanic hazards. Three studies are presented in this dissertation to address these issues. Inversion …

Culture And Conservation: Beyond Anthropocentrism, Nathan Poirier

Journal of Ecological Anthropology

No abstract provided.

The Record‐Breaking 2015 Hurricane Season In The Eastern North Pacific: An Analysis Of Environmental Conditions, Jennifer Collins, Philip J. Klotzbach, Ryan N. Maue, David R. Roache, Eric S. Blake, Charles H. Paxton, Christopher A. Mehta

School of Geosciences Faculty and Staff Publications

The presence of a near‐record El Niño and a positive Pacific Meridional Mode provided an extraordinarily warm background state that fueled the 2015 eastern North Pacific hurricane season to near‐record levels. We find that the western portion of the eastern North Pacific, referred to as the Western Development Region (WDR; 10°–20°N, 116°W–180°), set records for named storms, hurricane days, and Accumulated Cyclone Energy in 2015. When analyzing large‐scale environmental conditions, we show that record warm sea surface temperatures, high midlevel relative humidity, high low‐level relative vorticity, and record low vertical wind shear were among the environmental forcing factors contributing to …

High-Resolution Signatures Of Oxygenation And Microbiological Activity In Speleothem Fluid Inclusions, Nigel Blamey, Penelope J. Boston, Laura Rosales-Lagarde

International Journal of Speleology

Speleothems frequently host “fossil” fluids that were trapped in small inclusions during growth. Such fluids may provide valuable clues to past microbial, geochemical, and climatic processes during their formation. However, one difficulty is to understand which gases represent background atmosphere and fluids within a given cave system at a particular time, and which may be the product of post-trapping residual microbial activity or abiotic chemical reactions? Do we have any hope of sorting out these differences? The success depends on a quantitative understanding of the gas composition trapped in the inclusions and an understanding of the interactions of cave mineralogy, …

Tube Coalescence In The Jingfudong Lava Tube And Implications For Lava Flow Hazard Of Tengchong Volcanism, Zhengquan Chen, Yongshun Liu, Haiquan Wei, Jiandong Xu, Wenfeng Guo

International Journal of Speleology

Tube-fed structure occurs as a general phenomenon in Tengchong basic lavas, such as lava tubes, lava plugs and tube-related collapse depressions. We deduced the development of Laoguipo lava flows, which is the longest lava tube (Jingfudong lava tube) evolved in Tengchong volcanic area. Following the detailed documentation of the tube morphology of the Jingfudong lava tube, we propose that the Jingfudong lava tube was formed through vertical coalescence of at least three tubes. The coalescence and bifurcation process are re-constructed by interpretation of tube floor continuity, the distribution of remnant tubes and the scales of lava tube branches (shapes of …

Transitions Between Explosive And Effusive Phases During The Cataclysmic 2010 Eruption Of Merapi Volcano, Java, Indonesia, Katie Preece, Ralf Gertisser, Jenni Barclay, Sylvain J. Charbonnier, Jean-Christophe Komorowski, Richard A. Herd

School of Geosciences Faculty and Staff Publications

Transitions between explosive and effusive activity are commonly observed during dome-forming eruptions and may be linked to factors such as magma influx, ascent rate and degassing. However, the interplay between these factors is complex and the resulting eruptive behaviour often unpredictable. This paper focuses on the driving forces behind the explosive and effusive activity during the well-documented 2010 eruption of Merapi, the volcano’s largest eruption since 1872. Time-controlled samples were collected from the 2010 deposits, linked to eruption stage and style of activity. These include scoria and pumice from the initial explosions, dense and scoriaceous dome samples formed via effusive …

Tephraprob: A Matlab Package For Probabilistic Hazard Assessments Of Tephra Fallout, Sébastien Biass, Costanza Bonadonna, Laura J. Connor, Charles B. Connor

School of Geosciences Faculty and Staff Publications

TephraProb is a toolbox of Matlab functions designed to produce scenario–based probabilistic hazard assessments for ground tephra accumulation based on the Tephra2 model. The toolbox includes a series of graphical user interfaces that collect, analyze and pre–process input data, create distributions of eruption source parameters based on a wide range of probabilistic eruption scenarios, run Tephra2 using the generated input scenarios and provide results as exceedence probability maps, probabilistic isomass maps and hazard curves. We illustrate the functionality of TephraProb using the 2011 eruption of Cordón Caulle volcano (Chile) and selected eruptions of La Fossa volcano (Vulcano Island, Italy). The …

Intramolecular 1,5-C(Sp3)–H Radical Amination Via Co(Ii)-Based Metalloradical Catalysis For Five-Membered Cyclic Sulfamides, Hongjian Lu, Kai Lang, Huiling Jiang, Lukasz Wojtas, X Peter Zhang

Chemistry Faculty Publications

Co(II)-based metalloradical catalysis (MRC) proves effective for intramolecular 1,5-C–H amination of sulfamoyl azides under neutral and nonoxidative conditions, providing a straightforward approach to access strained 5-membered cyclic sulfamides with nitrogen gas as the only byproduct. The metalloradical amination system is applicable to different types of C(sp³)–H bonds and has a high degree of functional group tolerance. Additional features of the Co(II)-catalyzed 1,5-C–H amination include excellent chemoselectivity toward allylic and propargylic C–H bonds. The unique reactivity and selectivity profile of the Co(II)-catalyzed 1,5-C–H amination is attributed to the underlying radical mechanism of MRC.

Sunlight Induced Chlorophyll Fluorescence In The Near-Infrared Spectral Region In Natural Waters: Interpretations Of The Narrow Reflectance Peak Around 761nm, Yingcheng Lu, Linhai Li, Minwei Zhang, Shaojie Sun, Chunguang Lv

Marine Science Faculty Publications

Sunlight induced chlorophyll a fluorescence (SICF) can be used as a probe to estimate chlorophyll a concentrations (Chl) and infer phytoplankton physiology. SICF at ∼685 nm has been widely applied to studies of natural waters. SICF around 740 nm has been demonstrated to cause a narrow reflectance peak at ∼761 nm in the reflectance spectra of terrestrial vegetation. This narrow peak has also been observed in the reflectance spectra of natural waters, but its mechanism and applications have not yet been investigated and it has often been treated as measurement artifacts. In this study, we aimed to interpret …

Binary Alkali-Metal Silicon Clathrates By Spark Plasma Sintering: Preparation And Characterization, Igor Veremchuk, Matt Beekman, Iryna Antonyshyn, Walter Schnelle, Michael Baitinger, George S. Nolas, Yuri Grin

Physics Faculty Publications

The binary intermetallic clathrates K_8-xSi₄₆ (x = 0.4; 1.2), Rb_6.2Si₄₆, Rb_11.5Si₁₃₆ and Cs_7.8Si₁₃₆ were prepared from M₄Si₄ (M = K, Rb, Cs) precursors by spark-plasma route (SPS) and structurally characterized by Rietveld refinement of PXRD data. The clathrate-II phase Rb_11.5Si₁₃₆ was synthesized for the first time. Partial crystallographic site occupancy of the alkali metals, particularly for the smaller Si₂₀ dodecahedra, was found in all compounds. SPS preparation of Na₂₄Si₁₃₆ with different SPS current polarities …

A Molluscan Record Of Monsoonal Precipitation Along The Western Shoreline Of The Late Maastrichtian Western Interior Seaway, Scott Allen Ishler

USF Tampa Graduate Theses and Dissertations

Global warming in response to increasing levels of atmospheric CO2 concentration (pCO₂) has generated concern over the effects of increasing surface temperature on the hydrologic cycle. Investigating precipitation dynamics during past ‘greenhouse’ intervals provide important insights necessary to better constrain potential future climate scenarios. The Late Cretaceous greenhouse is characterized by elevated pCO₂ and surface temperatures, with a prolonged cooling trend which initiated in the late Campanian and an associated 4^th-order sea-level regression recorded in the Western Interior Seaway (WIS), providing an opportunity to examine the hydrologic cycle under conditions of changing temperature and sea-level. …

Efficient Algorithms And Applications In Topological Data Analysis, Junyi Tu

USF Tampa Graduate Theses and Dissertations

Topological Data Analysis (TDA) is a new and fast growing research field developed over last two decades. TDA finds many applications in computer vision, computer graphics, scientific visualization, molecular biology, and material science, to name a few. In this dissertation, we make algorithmic and application contributions to three data structures in TDA: contour trees, Reeb graphs, and Mapper. From the algorithmic perspective, we design a parallel algorithm for contour tree construction and implement it in OpenCL. We also design and implement critical point pairing algorithms to compute persistence diagrams directly from contour trees, Reeb graphs, and Mapper. In terms of …

Material Expertise: Applying Object-Oriented Rhetoric In Marine Policy, Zachary Parke Dixon

USF Tampa Graduate Theses and Dissertations

This dissertation applies object-oriented rhetorics and posthuman philosophies to environmental policy deliberation in order to help bridge gaps between policy makers, scientists, and citizens. For environmental policy scholars the non-credentialed expertise of local, or indigenous stakeholders is valued as possessing technical, objective merit that can improve the development and implementation of environmental policies. However, the utilization of stakeholder expertise in environmental policy faces serious challenges in terms of finding common grounds for communication within complex techno-social systems, of overcoming deep cultural differences and perceptions, and grave ethical issues of access and power. This dissertation develops two case studies of marine …

Monitoring And Mitigation Of Elevated Co2 Impacts Using Microalgae, Terry-Rene Wiesner Brown

USF Tampa Graduate Theses and Dissertations

Climate change is arguably the greatest environmental and economic challenge of our time. There are considerable documented and projected impacts to both human and natural systems as a result of climate change. These impacts include changes in temperature, sea level, precipitation patterns, and biogeography of ecologically and economically relevant species, including pathogens. One of the main drivers of climate change is elevated levels of atmospheric carbon dioxide (CO₂), a greenhouse gas. Since pre-industrial times, atmospheric CO₂ levels have increased from approximately 280 ppm to over 400 ppm, as a result of fossil fuel combustion, cement production and …

Review Of Sustainable Energy -- Without The Hot Air By David Mackay (2009), Kira Hamman

Numeracy

David MacKay. Sustainable Energy: Without the hot air. (Cambridge, England: UIT Cambridge Ltd., 2009). 384 pp. ISBN 978-0954452933 (also available as a free e-book).

Physicist David MacKay transforms what has historically been a debate fraught with skepticism and hysteria into an informed conversation. He does this by providing clear, accurate quantitative information on energy production and consumption in a form that allows comparison and invites thoughtful analysis. By recalibrating power into kilowatt-hours per day per person, he makes the numbers meaningful on an individual level. He then meticulously estimates the productive capacity of various renewable energy sources, explores alternative …

On A Desert Island With Unit Sticks, Continued Fractions And Lagrange, Victor J. Ricchezza, H. L. Vacher

Numeracy

GLY 4866, Computational Geology, provides an opportunity, welcomed by our faculty, to teach quantitative literacy to geology majors at USF. The course continues to evolve although the second author has been teaching it for some 20 years. This paper describes our experiences with a new lab activity that we are developing on the core issue of measurement and units. The activity is inspired by a passage in the 2008 publication of lectures that Joseph Louis Lagrange delivered at the Ecole Normale in 1795. The activity envisions that young scientists are faced with the need to determine the dimensions of a …

Photic Stress In Symbiont-Bearing Reef Organisms: Analyses Of Photosynthetic Performance, Natasha Mendez-Ferrer

USF Tampa Graduate Theses and Dissertations

Photo-oxidative stress is one of the key factors that can induce bleaching in reef organisms. With the decline of coral reefs and recurrent bleaching events, many studies have focused on understanding the mechanism behind this phenomenon. Two of the hypotheses that explain how the photosynthetic performance of the symbiont is affected and influences bleaching are: (1) disruption of the photosynthetic pathway by direct damage to the photosystem II (PSII), and (2) by inhibition of the Calvin-Benson cycle. In this dissertation I examine different aspects of photosynthetic performance in symbiont-bearing reef organisms and how this is influenced by symbiont loss and …

A Smartphone-Based System For Clinical Gait Assessment, Andres Alfredo Perez Leon

USF Tampa Graduate Theses and Dissertations

Patients with lower limbs problems are an increasing population in the US and many of them require surgery and its subsequent post-op Physical Therapy (PT). For all these patients, tracking their progress and evolution towards full recovery is very important. To assess the patients and track their progress, patients are usually required to perform very specific tests administered by a physical therapist. These tests either require very expensive equipment or rather require the subjective experience of the physical therapist who administer them. One of these tests is the Functional Gait Assessment (FGA) test, perhaps the most widely adopted one for …

Authentication In Wireless Body Area Networks (Wban), Nagalaxmi Yenuganti

USF Tampa Graduate Theses and Dissertations

With the advancements in technology and computing environment capabilities, the number of devices that people carry has increased exponentially. This increase initially occurred as a result of necessity to monitor the human body condition due to chronic diseases, heart problems etc. Later, individuals’ interest was drawn towards self-monitoring their physiology and health care. This is achieved by implanting various sensors that can proactively monitor the human body based on medical necessity and the health condition of the user. Sensors connected on a human body perceive phenomena such as locomotion or heartbeat, and act accordingly to form a Body Area Network. …

Polymer Characteristics Of Polyelectrolyte Polypeptides, Jorge Monreal

USF Tampa Graduate Theses and Dissertations

Polypeptides are polymerized chains of amino acids linked covalently through peptide bonds. Polyelectrolyte polypeptides are polypeptides with electrolyte repeating groups. Several amino acids contain ionizable side chains which result in charge distributions when dissolved in aqueous solutions. This dissertation is motivated by a desire to gain knowledge of polyelectrolyte polypeptides as recent advances in chemical synthesis of polypeptides have made possible the fabrication of designed polypeptides that do not naturally occur in nature. Potential applications of newly designed polypeptides span the range from medical to clothing and energy even to robotics.

In this dissertation we compare the characteristic behavior of …

Applications Of Molecular Modelling And Structure Based Drug Design In Drug Discovery, Sreya Mukherjee

USF Tampa Graduate Theses and Dissertations

Calcium ions have important roles in cellular processes including intracellular signaling, protein folding, enzyme activation and initiation of programmed cell death. Cells maintain low levels of calcium in their cytosol in order to regulate these processes. When activation of calcium-dependent processes is needed, cells can release calcium stored in the endoplasmic reticulum (ER) into the cytosol to initiate the processes. This can also initiate formation of plasma membrane channels that allow entry of additional calcium from the extracellular milieu. The change in calcium levels is referred to as calcium flux. A key protein involved in initiation of calcium flux is …

The Effect Of Home Range Estimation Techniques On Habitat Use Analysis, Brendon Quinton

USF Tampa Graduate Theses and Dissertations

The term “home range” refers to the area in which an animal spends most of its time during everyday activities. This study examined the effects of four different home range estimation techniques on the proportions of habitats located therein. The study utilized a point dataset collected for twenty individual Florida Black Bears (Ursus americanus floridanus), occurring in five different areas throughout the state of Florida. Each dataset was used to create home ranges using the following techniques: (1) Minimum Convex Polygon, (2) Kernel Density Estimation, (3) Characteristic Hull Polygon, and (4) Time-Geographic Density Estimation, a new home range …

Enforcing Security Policies On Gpu Computing Through The Use Of Aspect-Oriented Programming Techniques, Bader Albassam

USF Tampa Graduate Theses and Dissertations

This thesis presents a new security policy enforcer designed for securing parallel computation on CUDA GPUs. We show how the very features that make a GPGPU desirable have already been utilized in existing exploits, fortifying the need for security protections on a GPGPU. An aspect weaver was designed for CUDA with the goal of utilizing aspect-oriented programming for security policy enforcement. Empirical testing verified the ability of our aspect weaver to enforce various policies. Furthermore, a performance analysis was performed to demonstrate that using this policy enforcer provides no significant performance impact over manual insertion of policy code. Finally, future …

Fast Computation On Processing Data Warehousing Queries On Gpu Devices, Sam Cyrus

USF Tampa Graduate Theses and Dissertations

Current database management systems use Graphic Processing Units (GPUs) as dedicated accelerators to process each individual query, which results in underutilization of GPU. When a single query data warehousing workload was run on an open source GPU query engine, the utilization of main GPU resources was found to be less than 25%. The low utilization then leads to low system throughput. To resolve this problem, this paper suggests a way to transfer all of the desired data into the global memory of GPU and keep it until all queries are executed as one batch. The PCIe transfer time from CPU …

Oversampling Methods For Imbalanced Dataset Classification And Their Application To Gynecological Disorder Diagnosis, Iman Nekooeimehr

USF Tampa Graduate Theses and Dissertations

In many applications, the dataset for classification may be highly imbalanced where most of the instances in the training set may belong to some of the classes (majority classes), while only a few instances are from the other classes (minority classes). Conventional classifiers will strongly favor the majority class and ignore the minority instances. The imbalance problem can occur in both binary data classification and also in ordinal regression. Ordinal regression is a supervised approach for learning the ordinal relationship between classes. Extensive research has been performed for addressing imbalanced datasets for binary classification; however, current methods do not address …

Digital Integration, Jacob C. Boccio

USF Tampa Graduate Theses and Dissertations

Artificial intelligence is an emerging technology; something far beyond smartphones, cloud integration, or surgical microchip implantation. Utilizing the work of Ray Kurzweil, Nick Bostrom, and Steven Shaviro, this thesis investigates technology and artificial intelligence through the lens of the cinema. It does this by mapping contemporary concepts and the imagined worlds in film as an intersection of reality and fiction that examines issues of individual identity and alienation. I look at a non-linear timeline of films involving machine advancement, machine intelligence, and stages of post-human development; Elysium (2013) and Surrogates (2009) are about technology as an extension of the self, …

Decision Support Systems For Water Management: Investigating Stakeholder Perceptions Of System Use, Gabriella Balsam

USF Tampa Graduate Theses and Dissertations

Water resources are becoming increasingly important to protect, but doing so has proven challenging due to the complex nature of resource management. Many researchers have been trying to develop “usable science” to aid in this endeavor, and one method of this is the development of decision support systems. This has led to the employment of this method as a potential tool for decision makers, scientists, and the interested public to use; yet little literature is available on the success of their implementation. This study attempted to fill the gaps by gathering data through surveys and interviews from stakeholders who are …

Electrospinning Of Polymeric Solutions Using Opuntia Ficus-Indica Mucilage And Iron Oxide For Nanofiber Membranes For Treating Arsenic Contaminated Water, Venkatesh Eppili

USF Tampa Graduate Theses and Dissertations

Water is the essential part of every organism and it is also a vital constituent of healthy living and diet. Unfortunately water contamination over the past decade has increased dramatically leading to various diseases. As technology advances, we are detecting many pollutants at smaller levels of concentrations. Arsenic (As) is one of those major pollutants, and Arsenic poisoning is a condition caused due to excess levels of arsenic in the body. The main basis for Arsenic poisoning is from ground water which naturally contains high concentrations of arsenic. A case study from 2007 states that over 137 million people in …

Impact Of Visualization On Engineers – A Survey, Dhaval Kashyap Shah

USF Tampa Graduate Theses and Dissertations

In the recent years, there has been a tremendous growth in data. Numerous research and technologies have been proposed and developed in the field of Visualization to cope with the associated data analytics. Despite these new technologies, the pace of people’s capacity to perform data analysis has not kept pace with the requirement. Past literature has hinted as to various reasons behind this disparity. The purpose of this research is to demonstrate specifically the usage of Visualization in the field of engineering. We conducted the research with the help of a survey identifying the places where Visualization educational shortcomings may …

Environmental And Community Health In South San Diego County: A Behavior Analysis Of Recreational Ocean Users Along Imperial Beach, California, Trista Brophy

USF Tampa Graduate Theses and Dissertations

Garbage & sewage runoff into the Pacific Ocean at the shoreline along the U.S./Mexico Border region poses serious health and environmental threats. The purpose of this study was to analyze the current beach users’ behavioral factors that may be linked to illness prevalence from Coronado Island to the U.S./Mexico border at Imperial Beach in San Diego County. It is a continuation of a study completed by Wildcoast and Imperial Beach Clinic in 2011. The study tried to answer the following two major questions: How have the number of illnesses reported by users along South San Diego County beaches changed in …