Physical Sciences and Mathematics Commons^™

Physics-Guided Neural Network For Predicting Chemical Signatures, Cara Murphy, John Kerekes

Articles

Achieving high classification accuracy on trace chemical residues in active spectroscopic sensing is challenging due to the limited amount of training data available to the classifier. Such classifiers often rely on physics-based models for generating training data though these models are not always accurate when compared to measured data. To overcome this challenge, we developed a physics-guided neural network (PGNN) for predicting chemical reflectance for a set of parameterized inputs that is more accurate than the state-of-the-art physics-based signature model for chemical residues. After training the PGNN, we use it to generate a library of predicted spectra for training a …

The Mechanism Of Ptov1 Regulation By 14-3-3, Huwei1 And Sgk2, Pramoda Sahan Kumari Aththota Gamage

Theses and Dissertations

Prostate tumor overexpressed 1 (PTOV1) is highly expressed in several forms of cancer. High expression of PTOV1 is associated with tumor aggressiveness in several tumor types, including ovarian and breast cancer. Currently, PTOV1 is known to act both as a translational and transcriptional regulator aiding in the expression of prosurvival genes. Although PTOV1 is known to pass in and out of the nucleus in a cell cycle-dependent manner, the regulation of PTOV1 activity is not well understood and here we identify 14-3-3 as a PTOV1 interactor and show that high levels of 14-3-3 expression, like PTOV1, correlate with prostate cancer …

Glaciers Of The Olympic Mountains, Washington - The Past And Future 100 Years, Andrew G. Fountain, Christina Gray, Bryce Allen Glenn, Brian Menounos, Justin Pflug, Jon L. Riedel

Geology Faculty Publications and Presentations

In 2015, the Olympic Mountains contain 255 glaciers and perennial snowfields totaling 25.34 ± 0.27 km², half of the area in 1900, and about 0.75 ± 0.19 km³ of ice. Since 1980, glaciers shrank at a rate of -0.59 km² yr^-1 during which 35 glaciers and 16 perennial snowfields disappeared. Area changes of Blue Glacier, the largest glacier in the study region, was a good proxy for glacier change of the entire region. A simple mass balance model of the glacier, based on monthly air temperature and precipitation, correlates with glacier area change. The mass …

Determination Of The Traits In Leguminous Crops Under Saline Condition, Tojiddin Kuliev, Karomat Ismailova

Karakalpak Scientific Journal

In this study, the variability and determination of genetic traits for winter legume crop varieties the Vostok-55 (Pisum arvense L) and Mirzachul-1 (Vicia villoza Roth L) were investigated under moderate saline soil condition. Results show that the weight of the bean was marked as variable and highly deterministic, and the height of the plants was the most stable. The selection of plants based on these traits is the most effective way of salinity. Both variety the forage pea Vostok-55 and vetch Mirzachul-1 is highly recommended as a sideration and forage crop in saline lands.

Bat Guano Minerals And Mineralization Processes In Chameau Cave, Eastern Morocco, Philippe Audra, Vasile Heresanu, Lionel Barriquand, Mohamed El Kadiri Boutchich, Stephane Jaillet, Edwige Pons-Branchu, Pavel Bosak, Hai Cheng, R Lawrence Edwards, Michel Renda

International Journal of Speleology

The decay of bat guano deposits in caves produces mineral accumulations, mainly phosphates and secondary sulfates. Chameau Cave, Eastern Morocco, is located in the semi-arid Bni Snassen Mountains. It is composed of semi-active and dry passages, and is featured by strong condensation-corrosion on the walls, presence of fluvial sediments, and old corroded flowstones. Due to forced and convective airflow, the cave is generally very dry, with some damp sites related to condensation. Samples collected on the surface of different passages and along two sediment profiles yielded minerals related to bat guano decay. On recent or fresh guano, precursor minerals correspond …

Formation Of Supermassive Black Holes In The Early Universe, Arpan Das

Electronic Thesis and Dissertation Repository

The aim of the work presented in this thesis is to understand the formation and growth of the seeds of the supermassive black holes in early universe. Supermassive black holes (SMBH) with masses larger than 10⁸M_Sun have been observed when the Universe was only 800 Myr old. The formation and accretion history of the seeds of these supermassive black holes are a matter of debate. We consider the scenario of massive seed black hole formation which allows gas to directly collapse into a black hole (DCBH) of similar mass. Considering this scenario, we show that the mass …

On The Dynamic Generation Of Megagauss-Level Magnetic Fields On 100-Ns Timescales To Stabilize And Magnetize Pulsed-Power-Driven Liner Implosions, Gabriel A. Shipley

Electrical and Computer Engineering ETDs

This dissertation presents analysis of experiments and simulations executed to develop the auto-magnetizing liner concept (AutoMag) for use as an alternative premagnetization mechanism for MagLIF. Tests of each stage of AutoMag (magnetization, dielectric breakdown, and implosion) were executed on the Mykonos accelerator and the Z accelerator. Experiments demonstrate strong peak axial magnetic field production (20 – 150 T), dielectric breakdown initiation that depends on global induced electric field across the target, and a level of cylindrical implosion uniformity high enough to be useful for prospective fusion-fuel-filled (auto-magnetized MagLIF) experiments.

This dissertation also presents detailed simulations of the Solid Liner Dynamic …

Gorgonians Are Foundation Species On Sponge-Dominated Mesophotic Coral Reefs In The Caribbean, Marc Slattery, Michael P. Lesser

Faculty and Student Publications

Foundation species (FS) regulate ecological processes within communities often facilitating biodiversity and habitat complexity. Typically FS are dominant structure-forming taxa; but less dominant taxa having disproportionate ecological impacts to the community can also be FS. Mesophotic coral ecosystems (MCEs) are deep coral reef (∼30–150 m) communities, often dominated by emergent sponges in the Caribbean Basin. Despite the potential competitive advantage of sponges on MCEs, gorgonians are also common constituents of these reefs. Data from the Bahamas demonstrate increased biodiversity and densities of sponges on mesophotic reefs with gorgonians relative to reefs without these species. Drawing upon fifteen years of field …

Ratiometric Near-Infrared Fluorescent Probes Based On Hemicyanine Dyes Bearing Dithioacetal And Formal Residues For Ph Detection In Mitochondria, Yunnan Yan, Yibin Zhang, Shuai Xia, Shulin Wan, Tara Vohs, Marina Tanasova, Rudy Luck, Haiying Lui

Michigan Tech Publications

Ratiometric near-infrared fluorescent probes (AH+ and BH+) have been prepared for pH determination in mitochondria by attaching dithioacetal and formal residues onto a hemicyanine dye. The reactive formyl group on probe BH+ allows for retention inside mitochondria as it can react with a protein primary amine residue to form an imine under slightly basic pH 8.0. Probes AH+ and BH+ display ratiometric fluorescent responses to pH changes through the protonation and deprotonaton of a hydroxy group in hemicyanine dyes with experimentally determined pKa values of 6.85 and 6.49, respectively. Calculated pKa values from a variety of theoretical methods indicated that …

The Agnostic Structure Of Data Science Methods, Domenico Napoletani, Marco Panza, Daniele Struppa

MPP Published Research

In this paper we argue that data science is a coherent and novel approach to empirical problems that, in its most general form, does not build understanding about phenomena. Within the new type of mathematization at work in data science, mathematical methods are not selected because of any relevance for a problem at hand; mathematical methods are applied to a specific problem only by `forcing’, i.e. on the basis of their ability to reorganize the data for further analysis and the intrinsic richness of their mathematical structure. In particular, we argue that deep learning neural networks are best understood within …

Computing The Rank Of Braids, Justin Meiners

Theses and Dissertations

We describe a method for computing rank (and determining quasipositivity) in the free group using dynamic programming. The algorithm is adapted to computing upper bounds on the rank for braids. We test our method on a table of knots by identifying quasipositive knots and calculating the ribbon genus. We consider the possibility that rank is not theoretically computable and prove some partial results that would classify its computational complexity. We then present a method for effectively brute force searching band presentations of small rank and conjugate length.

The Association Of Dietary Patterns With Dietary Inflammatory Index, Systemic Inflammation, And Insulin Resistance, In Apparently Healthy Individuals With Obesity, Maryam Saghafi-Asl, Susan Mirmajidi, Mohammad Asghari Jafarabadi, Farhad Vahid, Nitin Shivappa, James R. Hébert Scd, Vahideh Ebrahimzadeh Attari

Faculty Publications

Inflammation is considered a key mechanism leading to obesity. Dietary patterns and certain food items influence inflammation. Few studies have investigated the contribution of major dietary patterns to biological measures of inflammation. Therefore, the present study aimed to examine the associations of different dietary patterns with dietary inflammatory index (DII), systemic inflammation, and insulin resistance (IR) in the apparently healthy obese. In this cross-sectional study, 151 abdominally obese subjects were recruited from the Northwest of Iran. Dietary intake, demographic data, anthropometric indices, and physical activity (PA) was assessed. DII scores were calculated based on a validated 168-item food frequency questionnaire …

The Association Of Dietary Patterns With Dietary Inflammatory Index, Systemic Inflammation, And Insulin Resistance, In Apparently Healthy Individuals With Obesity, Maryam Saghafi-Asl, Susan Mirmajidi, Mohammad Asghari Jafarabadi, Farhad Vahid, Nitin Shivappa, James Hébert Scd, Vahideh Ebrahimzadeh Attari

Faculty Publications

Infammation is considered a key mechanism leading to obesity. Dietary patterns and certain food items infuence infammation. Few studies have investigated the contribution of major dietary patterns to biological measures of infammation. Therefore, the present study aimed to examine the associations of diferent dietary patterns with dietary infammatory index (DII), systemic infammation, and insulin resistance (IR) in the apparently healthy obese. In this cross-sectional study, 151 abdominally obese subjects were recruited from the Northwest of Iran. Dietary intake, demographic data, anthropometric indices, and physical activity (PA) was assessed. DII scores were calculated based on a validated 168-item food frequency questionnaire …

Dietary Inflammatory Index Is Related To Heart Failure Risk And Cardiac Function: A Case-Control Study In Heart Failure Patients, Jalal Moludi, Nitin Shivappa Mbbs, Mph, Ph.D., Soghra Alisgharzadeh, James R. Hébert Scd, Mohammad Alizadeh

Faculty Publications

Aims: Previous studies suggest that diet and inflammation are important risk factors for heart failure (HF); however, the associations remain unclear. The Dietary Inflammatory Index (DII®) was established to measure the inflammatory capacity of individuals' diet. This study aimed to explore the DII in HF subjects compared with controls. Methods and Results: We conducted a case–control (116 cases and 113 controls) study that recruited in the similar clinics. DII scores were calculated based on dietary intakes. N-Terminal pro-brain natriuretic peptide (NT-proBNP) levels and ejection fraction (EF) were assessed in both groups. In order to analyze DII scores with HF as …

The Role Of Hydrated Minerals And Space Weathering Products In The Bluing Of Carbonaceous Asteroids, David Trang, Michelle S. Thompson, Bet E. Clark, Hannah H. Kaplan, Xiao-Duan Zou, Jian-Yang Li, Salvatore M. Ferrone, Victoria E. Hamilton, Amy A. Simon, Dennis C. Reuter, Lindsay P. Keller, M. Antonietta Barucci, Humberto Campins, Cateline Lantz, Daniella N. Dellagiustina, Ronald-Louis Ballouz, Erica R. Jawin, Harold Connolly Jr., Kevin J. Walsh, Dante Lauretta

School of Earth & Environment Departmental Research

The surfaces of airless bodies such as lunar and S-type asteroids typically become spectrally redder in visible to near-infrared reflectance with longer exposures to space weathering. However, some carbonaceous asteroids instead become spectrally bluer. Space weathering experiments on carbonaceous meteorites have provided some clues as to the space weathering products that could produce spectral bluing. We applied these experimental results to our Hapke radiative transfer model, with which we modeled spectral data from the OSIRIS-REx mission in order to determine whether these space weathering products—specifically, nanophase and microphase metallic iron, troilite, and magnetite—could explain the globally blue spectrum of the …

Application Of The Global Srtm And Aw3d30 Digital Elevation Models To Mapping Folds At Cave Sites, Mark J. Abolins, Albert E. Ogden

International Journal of Speleology

A novel method to map and quantitatively describe very gentle folds (limb dip <5^o) at cratonic cave sites was evaluated at Snail Shell and Nanna Caves, central Tennessee, USA. Elevations from the global SRTM digital terrain model (DTM) were assigned to points on late Ordovician geologic contacts, and the elevations of the points were used to interpolate 28 m cell size natural neighbor digital elevation models (DEM’s) of the contacts. The global Forest Canopy Height Dataset was subtracted from the global 28 m cell size AW3D30 digital surface model (DSM) to create a DTM, and that DTM was applied …

Dynamics Of Systems Driven By An External Force, Xue Liu

Theses and Dissertations

In this dissertation, we study the complicated dynamics of two classes of systems: Anosov systems driven by an external force and partially hyperbolic systems driven by an external force. For smooth Anosov systems driven by an external force, we first study the random specification property, which is on the approximation of an N−spaced arbitrary long finite random orbit segments within given precision by a random periodic point. We prove that if such system is topological mixing on fibers, then it has the random specification property. Furthermore, we prove that the homeomorphism induced by such a system on the space of …

Seed Production And Seed Quality Of Brachiaria Hybrids (Mulato And Mulato Ii) At Different Sites Of Thailand, Chaisang Phaikaew, Pimpaporn Pholsen, Ganda Nakamanee, Weerapon Poonpipat

IGC Proceedings (1993-2023)

No abstract provided.

Panicum Maximum Seeds From Sugarcane Plantations Improves Household Incomes In Uganda, P. Lusembo, C. Ebong

IGC Proceedings (1993-2023)

No abstract provided.

The Varying Effects Of Accessing High-Speed Rail System On China’S County Development: A Geographically Weighted Panel Regression Analysis, Danlin Yu

Sustainability Seminar Series

The construction of high-speed rail in China was initiated to answer increasing demand for fast and convenient transportation systems connecting large economic centers. It is commonly understood that access to HSR will have significant impact on economic development. It is, however, also quite possible that the benefits to economic development brought by HSR will have a diminishing marginal effect. With data of HSR stations distribution and a set of panel data of socioeconomic information at county-level from 2008 – 2015 in China, this study applies advanced spatiotemporal data analysis techniques to investigate the impact of HSR. Our results suggest that …

Predicting Tumor Response To Radiotherapy Based On Estimation Of Non-Treatment Parameters, Yutian Huang, Allison L. Lewis

Spora: A Journal of Biomathematics

Though clinicians can now collect detailed information about a variety of tumor characteristics as a tumor evolves, it remains difficult to predict the efficacy of a given treatment prior to administration. Additionally, the process of data collection may be invasive and expensive. Thus, the creation of a framework for predicting patient response to treatment using only information collected prior to the start of treatment could be invaluable. In this study, we employ ordinary differential equation models for tumor growth and utilize synthetic data from a cellular automaton model for calibration. We investigate which parameters have the most influence upon treatment …

Kleptoparasitic Hawk-Dove Games, Isabella H. Evans-Riester, Chasity T. Kay, Karina L. Ortiz-Suarez, Jan Rychtář, Dewey Taylor

Spora: A Journal of Biomathematics

The Hawk-Dove game is a classical game-theoretical model of potentially aggressive animal conflicts. In this paper, we apply game theory to a population of foraging animals that may engage in stealing food from one another. We assume that the population is composed of two types of individuals, Hawks and Doves. Hawks try to escalate encounters into aggressive contests while Doves engage in non-aggressive displays between themselves or concede to aggressive Hawks. The fitness of each type depends upon various natural parameters, such as food density, the mean handling time of a food item, as well as the mean times of …

Netsci High: Bringing Agency To Diverse Teens Through The Science Of Connected Systems, Stephen M. Uzzo, Catherine B. Cramer, Hiroki Sayama, Russell Faux

Northeast Journal of Complex Systems (NEJCS)

This paper follows NetSci High, a decade-long initiative to inspire teams of teenage researchers to develop, execute and disseminate original research in network science. The project introduced high school students to the computer-based analysis of networks, and instilled in the participants the habits of mind to deepen inquiry in connected systems and statistics, and to sustain interest in continuing to study and pursue careers in fields involving network analysis. Goals of NetSci High ranged from proximal learning outcomes (e.g., increasing high school student competencies in computing and improving student attitudes toward computing) to highly distal (e.g., preparing students for 21st …

Lecture 00: Opening Remarks: 46th Spring Lecture Series, Tulin Kaman

Mathematical Sciences Spring Lecture Series

Opening remarks for the 46th Annual Mathematical Sciences Spring Lecture Series at the University of Arkansas, Fayetteville.

Lecture 10: Preconditioned Iterative Methods For Linear Systems, Edmond Chow

Mathematical Sciences Spring Lecture Series

Iterative methods for the solution of linear systems of equations – such as stationary, semi-iterative, and Krylov subspace methods – are classical methods taught in numerical analysis courses, but adapting these methods to run efficiently at large-scale on high-performance computers is challenging and a constantly evolving topic. Preconditioners – necessary to aid the convergence of iterative methods – come in many forms, from algebraic to physics-based, are regularly being developed for linear systems from different classes of problems, and similarly are evolving with high-performance computers. This lecture will cover the background and some recent developments on iterative methods and preconditioning …

Weather And Climate Summary And Forecast: April 2021 Report, Gregory V. Jones

Linfield University Wine Studies Reports

This report provides a summary of the weather and climate forecast for April 2021. It includes forecast information specific to the Pacific Northwest and the western United States, as well as forecast information for other portions of the United States and abroad.

Exotic Brittle Star Interactions With Native Octocoral Epizoites: An Endemic Benthic Ctenophore In Peril?, Peter Glynn, Brian Coffman, Kyle Detloff, Joshua Dominguez, Philip Gilette, Nicholas Martinez, Nicolas Jones, Bernhard Riegl

Marine & Environmental Sciences Faculty Articles

Widespread and large populations of the exotic eastern Pacific ophiuroid brittle star Opthiothela mirabilis now occur in southeastern Florida, extending the range of this recently introduced species from southern Brazil northward to the eastern Caribbean Sea and Florida. The Florida brittle stars, representing two lineages, are epibionts on shallow (3-18 m depth), tropical/subtropical plexaurid (e.g., Eunicea spp., Muricea elongata) and gorgoniid (Antillogorgia spp.) octocorals. The scope of this study includes recent distributional records of O. mirabilis in south Florida, field abundances in relation to the cohabiting endemic ctenophore Coeloplana waltoni, behavioral observations of the ophiuroid, ctenophore and …

The Geomorphic Impact Of Mangrove Encroachment In An Australian Salt Marsh, Daniel J. Coleman, Kerrylee Rogers, D. Reide Corbett, Christopher J. Owers, Matthew L. Kirwan

VIMS Articles

Mangroves are encroaching into salt marshes throughout the world as a result of environmental change. Previous studies suggest mangroves trap sediment more efficiently than adjacent salt marshes, providing mangroves greater capacity to adapt to sea level rise; this may occur by displacing salt marshes. However, sediment transport in adjacent marsh-mangrove systems and its role in mangrove encroachment upon salt marsh remain poorly understood. Here we directly test the hypothesis that mangroves reduce the ability of adjacent marsh to adjust to sea level rise by measuring sediment transport across salt marsh platforms, with and without 6 m of fringing mangroves at …

Protonation Of Methyl Phenyl Porphyrin Isomers Using Uv Spectroscopy, Mamiko Swanson, Isabel De Angelis, Harsh Chheda, Rushi Patel, Raahil Shah, Shreya Patel, Maria Ballester Ph.D.

Chemistry and Physics Faculty Proceedings, Presentations, Speeches, Lectures

The protonation of methyl phenyl porphyrin isomers was studied through UV vis spectroscopy using trifluoroacetic acid (TFA), a strong organic acid. Protonation was achieved by titration of the porphyrin in toluene and toluene/methanol (90:10). A wavelength shift from the free base Soret to the protonated Soret confirms the formation of the dication. The resulting UV spectra was used to calculate an apparent pKa value of each free base porphyrin isomer. Addition of methanol to the porphyrin solution decreased the average pKa values of the Soret and Q-bands for each porphyrin. This could be an indication of a stabilizing monocation, not …

S Is For Sandhill: A Crane Alphabet, Paul A. Johnsgard

Zea E-Books Collection

This is a book of cranes, from A to Z, written and illustrated by the world’s foremost authority on the 15 species of these wonderful and ancient birds. It is a book for all ages, and for all who love and marvel at the beauty, order, and variety of the natural world.

Cranes exhibit complex behavior, pair-bonding, and fascinating social interactions. They migrate huge distances, crossing continents, oceans, and mountains between their nesting and wintering areas. Seven of the world’s 15 crane species are listed as “vulnerable,” three as “endangered,” one as “critically endangered,” and only three as of “least …